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SEED version cvs.1555556707 (3/17/2019 22:5:7) on gum.mcs.anl.gov
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Protein fig|216591.1.peg.1886: Burkholderia cenocepacia J2315

This feature in The SEED Viewer

NCBI Taxonomy Id: 216591

Current Assignment: putative TerS
Translate Function Assignments



Context on contig Bcep157f02.p2kA148 from base 302412 to 314123 (11712 bp)

Fid Start End Size
(nt)
  Gap Find
best
clusters
Pins Fc-sc SS Ev Function Aliases
1882 303188 302412 777 -              
1883 303941 303210 732 - 21         myosin-A docking protein  
1884 306336 305221 1116 - 1279         FIG00455841: hypothetical protein  
1885 308010 306691 1320 - 354         FIG00467626: hypothetical protein  
1886 308641 307976 666 - -35         putative TerS  
1887 309488 308832 657 - 190            
1888 309932 309543 390 - 54            
1889 310783 310202 582 - 269         HNH endonuclease  
1890 311021 311347 327 + 237     1: 1   hypothetical protein  
1891 311659 311378 282 - 30            
1892 311773 312675 903 + 113     1: 2   COG1801: Uncharacterized conserved protein  
1893 313431 312721 711 - 45            
1894 313485 314123 639 + 53     1: 1   hypothetical protein  

Annotation History   /   View All Related Annotations Help on Annotations



  Subsystems in Which This Protein Plays a Role

This PEG is currently not present in any subsytem.

  Protein Sequence

>fig|216591.1.peg.1886 putative TerS
MHALKTARHAIEAEAITNYLFNVVTADPNELAEVVTGACRYCWGYDISHLAKHGEYKINH
HYQFRTKDEQKRVKEANNGKYPNGNGGIGYTKDRAPNPECPYCDGRGETSYIVKDTNTFS
NARFLIKGLKIQNGQIEVQTHDKLKAADMLLRTLGAYEADNKQKSTGFTIQGGIDAETIK
LIQAGAQDREVEVRQFADDRLSGIKARLIEGADDESDNQTP

MD5 = 8f9cced5a5c3deaa0b75a81a5809fb61


  DNA Sequence

>fig|216591.1.peg.1886 putative TerS
ttgcacgcgctcaagacagcacgccatgcaatcgaagccgaggcgatcaccaactacctg
tttaacgtagtcacggccgatcctaacgaattggccgaagtcgttaccggagcctgccgg
tactgctggggttacgacatttcgcaccttgccaagcacggcgaatacaagatcaaccac
cactaccagtttcggaccaaggacgagcaaaagcgcgtcaaggaagcgaacaacgggaaa
tacccgaacggtaacggcggaatcggatacaccaaggatcgtgcacctaacccggaatgc
ccgtattgcgatggtcggggtgaaacgagctatatcgtcaaagacacgaatacgttctca
aacgcccgcttccttatcaagggtctaaagattcaaaacggccagattgaagtacagaca
cacgacaagctcaaagcggccgacatgctgctacggactttgggcgcgtacgaggccgac
aataagcagaaaagtacggggttcacgattcagggcggaattgatgcagaaaccatcaag
ctaattcaggcaggcgcacaggatcgtgaagtagaagtaagacagtttgctgatgaccga
ttgtccggaatcaaagcacgcttgatcgaaggtgccgacgatgagtcagacaatcaaact
ccctaa


  DNA with Flanking Sequence

>fig|216591.1.peg.1886 putative TerS
cgccacaacgcggggattggtattcccggtaaacaattccacgtatgtaaaacctcatat
cgatgagcgcgtggagttttcgccgctctacctctgccccgtccgtcaagagaacgccat
tttaatagcatcgcacgcgctccaagctggcgcgcacaaacgttttgggctggaaattcc
tcacatcgttcctagggagttgaaagccctgataaggaactaccatgacactaataaaaa
aggagcttcccgagccggaaaacgtgcagaaagggtcactcggaccacgcgcaacgccaa
ttcccgatgaagcaaatctaagaatcacactcgaaaaagataccgaaaccggcgaaaaca
agaaactgacattccaagaggaaacgctctgcttggaattcgccaaagataataactgga
ttcgcgcatgcaaacgcgcaggtctgaaaacctcaacagacttgcgcatgcaaccgcata
tccggaagcggctggaggaattgcacgcgctcaagacagcacgccatgcaatcgaagccg
aggcgatcaccaactacctgtttaacgtagtcacggccgatcctaacgaattggccgaag
tcgttaccggagcctgccggtactgctggggttacgacatttcgcaccttgccaagcacg
gcgaatacaagatcaaccaccactaccagtttcggaccaaggacgagcaaaagcgcgtca
aggaagcgaacaacgggaaatacccgaacggtaacggcggaatcggatacaccaaggatc
gtgcacctaacccggaatgcccgtattgcgatggtcggggtgaaacgagctatatcgtca
aagacacgaatacgttctcaaacgcccgcttccttatcaagggtctaaagattcaaaacg
gccagattgaagtacagacacacgacaagctcaaagcggccgacatgctgctacggactt
tgggcgcgtacgaggccgacaataagcagaaaagtacggggttcacgattcagggcggaa
ttgatgcagaaaccatcaagctaattcaggcaggcgcacaggatcgtgaagtagaagtaa
gacagtttgctgatgaccgattgtccggaatcaaagcacgcttgatcgaaggtgccgacg
atgagtcagacaatcaaactccctaatttacggccggatcaatggggaatcgcgttttct
gatcatcagtggaatgtagtacgttgcgggcgacggtacggaaagtcatacatcctgcgc
tatctggcaggtgacgccttacttaaaggacaactggtaggggtctacgcccctcaattc
gctaccctgacaaaaacatataacgaaatctacggcgatattgagcccgtcgtaacaggg
tcgaacaagggacacttgatcgaatccaaagtaacgggcggcgggatagatttttggtca
ctcgaatccggcctattcggacgtggacgtgaatatgacctgctgctttttgacgaaaca
gcgttcaccaaggacggcacgctagaaatctacagagacgcaatctcacccgttgttgcg
acgcgccccggcttccgcatgttttcgttttcgacaccccttgttatggacttgtcgaac
ttcttttatgccctccatgagcataaagactataagtggaatccaa


  Assignments for Essentially Identical Proteins

No essentially identical proteins found

  Links to Related Entries in Other Sites

This PEG has no links.
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  Functional Coupling

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  Attributes

Help on Attributes

Key
Link Explains Key
Value
isoelectric_point 6.63
molecular_weight 24652
PSORT::Cytoplasmic 8.96
PSORT_score::Cytoplasmic 8.96
similar_to_human no


  Protein Families

No protein families found

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