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SEED version cvs.1555556707 (3/17/2019 22:5:7) on gum.mcs.anl.gov
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Protein fig|208435.3.peg.565: Streptococcus agalactiae 2603V/R

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NCBI Taxonomy Id: 208435

Current Assignment: Phage Holliday junction resolvase
Translate Function Assignments



Context on contig NC_004116 from base 565607 to 576353 (10747 bp)

Fid Start End Size
(nt)
  Gap Find
best
clusters
Pins Fc-sc SS Ev Function Aliases
555 565607 566467 861 +           DNA replication protein dnaD locus|SAG0559, protein_id|NP_687588.1, gi|22536737, geneID|1013363
556 566448 566681 234 + -20         hypothetical protein locus|SAG0560, protein_id|NP_687589.1, gi|22536738, geneID|1013364
557 566678 566818 141 + -4         Phage protein locus|SAG0561, protein_id|NP_687590.1, gi|22536739, geneID|1013365
558 566829 567083 255 + 10         hypothetical protein - phage associated locus|SAG0562, protein_id|NP_687591.1, gi|22536740, geneID|1013366
559 567086 567247 162 + 2         hypothetical protein locus|SAG0563, protein_id|NP_687592.1, gi|22536741, geneID|1013367
560 567249 567731 483 + 1         hypothetical protein (phage associated) locus|SAG0564, protein_id|NP_687593.1, gi|22536742, geneID|1013368
561 567732 568406 675 + 0         Phage single-strand DNA binding protein locus|SAG0565, protein_id|NP_687594.1, gi|22536743, geneID|1013369
562 568399 568815 417 + -8     3: 1 3 2   Single-stranded DNA-binding protein gene_name|ssb-2, locus|SAG0566, protein_id|NP_687595.1, gi|22536744, geneID|1013370
563 569396 570715 1320 + 580         Retron-type RNA-directed DNA polymerase (EC 2.7.7.49) locus|SAG0567, protein_id|NP_687596.1, gi|22536745, geneID|1013371
564 570841 571044 204 + 125         hypothetical protein locus|SAG0568, protein_id|NP_687597.1, gi|22536746, geneID|1013372
565 571223 571510 288 + 178         Phage Holliday junction resolvase locus|SAG0569, protein_id|NP_687598.1, gi|22536747, geneID|1013373
566 571701 571847 147 + 190         hypothetical protein locus|SAG0570, protein_id|NP_687599.1, gi|22536748, geneID|1013374
567 571844 572161 318 + -4         hypothetical phage protein  
568 572165 572296 132 + 3         hypothetical protein locus|SAG0571, protein_id|NP_687600.1, gi|22536749, geneID|1013375
569 572296 572712 417 + -1         conserved hypothetical protein - phage associated locus|SAG0572, protein_id|NP_687601.1, gi|22536750, geneID|1013376
570 572709 572873 165 + -4         hypothetical protein locus|SAG0573, protein_id|NP_687602.1, gi|22536751, geneID|1013377
571 572870 573139 270 + -4         Phage protein locus|SAG0574, protein_id|NP_687603.1, gi|22536752, geneID|1013378
572 573142 573474 333 + 2         hypothetical protein locus|SAG0575, protein_id|NP_687604.1, gi|22536753, geneID|1013379
573 573557 573688 132 + 82         hypothetical protein locus|SAG0576, protein_id|NP_687605.1, gi|22536754, geneID|1013380
574 573781 574314 534 + 92         Phage protein locus|SAG0577, protein_id|NP_687606.1, gi|22536755, geneID|1013381
575 574311 574577 267 + -4         hypothetical protein locus|SAG0578, protein_id|NP_687607.1, gi|22536756, geneID|1013382
576 574965 575393 429 + 387         FIG021474: Phage protein locus|SAG0579, protein_id|NP_687608.1, gi|22536757, geneID|1013383
577 575934 576353 420 + 540         Phage-associated HNH homing endonuclease  

Annotation History   /   View All Related Annotations Help on Annotations



  Subsystems in Which This Protein Plays a Role

This PEG is currently not present in any subsytem.

  Protein Sequence

>fig|208435.3.peg.565 Phage Holliday junction resolvase
MKAPKTLSKEPTQRSKGKTIQIYQNFVRELIWHAKKPDIDNLIKAVFDSISDAGYDRIQK
SGIVWSDDNIVCDLRAKKKYSQNPRIKVRIEEIDR

MD5 = 30816866ed0f805ec939cfa1419d4137


  DNA Sequence

>fig|208435.3.peg.565 Phage Holliday junction resolvase
atgaaagcccccaaaacgctatcaaaagagcctacacaacgttctaaaggtaaaacaata
caaatatatcagaacttcgtgcgtgagcttatatggcacgctaagaagcctgatattgat
aatctgattaaagctgtttttgatagtatttccgatgcaggttacgacagaatacagaaa
tcaggtatcgtttggtcagatgacaatatcgtatgcgatttaagagcaaagaaaaaatac
agtcagaatccaagaataaaagtgaggattgaagagattgacagatga


  DNA with Flanking Sequence

>fig|208435.3.peg.565 Phage Holliday junction resolvase
atggctataacgtcgaagaaagaagatattgggaaagccgtgtaagggaaaaccttacgc
acggtttgacgaggggtttctgaggagatggctcaaatcagcgacctactctacaaaaat
gacgaagccgaggaaacaaaggatatatgcaatatatgatgacgacaaatttgtcgacgt
tggcacaaaagaagagttatcggcacggcttggaattaaaaaagcaacaatagaacagta
catgactaaatcatatcaagcgttagctagctcaaaacgaattgcattgttggtagggat
tgaagaggaatatgacttttaagacagaatttgaaataccaatcgaaccaaaacctcaaa
ctagacctaagttcagcaaatttggtacgtacgaagatccaaagatgaagagatggcgaa
aagaggtttctggatggatagaaaaaaattatgatggaccgtttttcgatgattgcataa
aggtagaggtaaccttttacatgaaagcccccaaaacgctatcaaaagagcctacacaac
gttctaaaggtaaaacaatacaaatatatcagaacttcgtgcgtgagcttatatggcacg
ctaagaagcctgatattgataatctgattaaagctgtttttgatagtatttccgatgcag
gttacgacagaatacagaaatcaggtatcgtttggtcagatgacaatatcgtatgcgatt
taagagcaaagaaaaaatacagtcagaatccaagaataaaagtgaggattgaagagattg
acagatgaattaataaatcaattttacaaaatttttgacaatgggattgtaaggcaaatt
aaaaagctagatgtagattgtaaaaaagccgagcaaataagatgtagcgttacaaataac
agacgtcgaaaaaccctgccaagaccgtacgttatcgaagcgtttaaagattattttgac
gaagatacctatgcacagatgtatatcaaatcatatcgtgagtatcacaacccaaatgac
cacgagacggaactttttgtaaaactaaaaagagcgcacaaagatactaagttagagcat
tacaaggaagttaagcgattgatgtacgcagcaatgaccttttgaggaggtatagcatgg
cagataaaataaacgcagagagtatgcaagctgcatacaacgaaaattatcaaatgtttt
tagctaaaaatgcggattatggaaattcgttcgaaaagtctttggatgacttcggattta
tcgctggtgtcgtccgtataagcgataa


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  Functional Coupling

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  Attributes

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  Protein Families

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