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SEED version cvs.1555556707 (3/17/2019 22:5:7) on aspen.cels.anl.gov
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Protein fig|208435.3.peg.562: Streptococcus agalactiae 2603V/R

This feature in The SEED Viewer

NCBI Taxonomy Id: 208435

Current Assignment: Single-stranded DNA-binding protein
Translate Function Assignments


Context on contig NC_004116 from base 562833 to 574314 (11482 bp)

Fid Start End Size
(nt)		   Gap Find
best
clusters		 Pins Fc-sc SS Ev Function Aliases
549 563639 562833 807 -           hypothetical protein locus|SAG0553, protein_id|NP_687582.1, gi|22536731, geneID|1013357
550 563691 563882 192 + 51         prophage LambdaSa1, transcriptional regulator, Cro/CI family locus|SAG0554, protein_id|NP_687583.1, gi|22536732, geneID|1013358
551 563950 564699 750 + 67         Phage antirepressor protein locus|SAG0555, protein_id|NP_687584.1, gi|22536733, geneID|1013359
552 564711 564854 144 + 11         hypothetical protein locus|SAG0556, protein_id|NP_687585.1, gi|22536734, geneID|1013360
553 565004 565234 231 + 149         hypothetical protein locus|SAG0557, protein_id|NP_687586.1, gi|22536735, geneID|1013361
554 565372 565596 225 + 137         hypothetical protein locus|SAG0558, protein_id|NP_687587.1, gi|22536736, geneID|1013362
555 565607 566467 861 + 10         DNA replication protein dnaD locus|SAG0559, protein_id|NP_687588.1, gi|22536737, geneID|1013363
556 566448 566681 234 + -20         hypothetical protein locus|SAG0560, protein_id|NP_687589.1, gi|22536738, geneID|1013364
557 566678 566818 141 + -4         Phage protein locus|SAG0561, protein_id|NP_687590.1, gi|22536739, geneID|1013365
558 566829 567083 255 + 10         hypothetical protein - phage associated locus|SAG0562, protein_id|NP_687591.1, gi|22536740, geneID|1013366
559 567086 567247 162 + 2         hypothetical protein locus|SAG0563, protein_id|NP_687592.1, gi|22536741, geneID|1013367
560 567249 567731 483 + 1         hypothetical protein (phage associated) locus|SAG0564, protein_id|NP_687593.1, gi|22536742, geneID|1013368
561 567732 568406 675 + 0         Phage single-strand DNA binding protein locus|SAG0565, protein_id|NP_687594.1, gi|22536743, geneID|1013369
562 568399 568815 417 + -8     3: 1 3 2   Single-stranded DNA-binding protein gene_name|ssb-2, locus|SAG0566, protein_id|NP_687595.1, gi|22536744, geneID|1013370
563 569396 570715 1320 + 580         Retron-type RNA-directed DNA polymerase (EC 2.7.7.49) locus|SAG0567, protein_id|NP_687596.1, gi|22536745, geneID|1013371
564 570841 571044 204 + 125         hypothetical protein locus|SAG0568, protein_id|NP_687597.1, gi|22536746, geneID|1013372
565 571223 571510 288 + 178         Phage Holliday junction resolvase locus|SAG0569, protein_id|NP_687598.1, gi|22536747, geneID|1013373
566 571701 571847 147 + 190         hypothetical protein locus|SAG0570, protein_id|NP_687599.1, gi|22536748, geneID|1013374
567 571844 572161 318 + -4         hypothetical phage protein  
568 572165 572296 132 + 3         hypothetical protein locus|SAG0571, protein_id|NP_687600.1, gi|22536749, geneID|1013375
569 572296 572712 417 + -1         conserved hypothetical protein - phage associated locus|SAG0572, protein_id|NP_687601.1, gi|22536750, geneID|1013376
570 572709 572873 165 + -4         hypothetical protein locus|SAG0573, protein_id|NP_687602.1, gi|22536751, geneID|1013377
571 572870 573139 270 + -4         Phage protein locus|SAG0574, protein_id|NP_687603.1, gi|22536752, geneID|1013378
572 573142 573474 333 + 2         hypothetical protein locus|SAG0575, protein_id|NP_687604.1, gi|22536753, geneID|1013379
573 573557 573688 132 + 82         hypothetical protein locus|SAG0576, protein_id|NP_687605.1, gi|22536754, geneID|1013380
574 573781 574314 534 + 92         Phage protein locus|SAG0577, protein_id|NP_687606.1, gi|22536755, geneID|1013381

Annotation History   /   View All Related Annotations Help on Annotations


  Subsystems in Which This Protein Plays a Role

Subsystem Curator Role
DNA_repair,_bacterial gjo Single-stranded DNA-binding protein
DNA_repair,_bacterial_RecFOR_pathway gjo Single-stranded DNA-binding protein
DNA_repair,_bacterial_UmuCD_system gjo *Single-stranded DNA-binding protein


  Protein Sequence

>fig|208435.3.peg.562 Single-stranded DNA-binding protein
MINNIVLVGRMTKDAELRYTPSNQAVATFSLAVNRNFKNQSGEREADFINCVIWRQQAEN
LANWAKKGALVGITGRIQTRNYENQQGQRIYVTEVVAENFQLLESRNSQQQTNQSGNSSN
SYFGNANKMDISDDDLPF

MD5 = b7f8d66519d9c2d1a47289785c875f59


  DNA Sequence

>fig|208435.3.peg.562 Single-stranded DNA-binding protein
atgattaacaacattgtactagtaggtcgcatgaccaaggatgccgaacttcgttataca
ccaagtaatcaagcggtagctactttttcacttgcagttaatcgtaattttaaaaatcaa
tctggcgaacgtgaggctgattttattaactgtgttatttggcgccaacaagctgaaaac
ttggctaactgggcaaaaaaaggtgctttggttggaattacaggtcgtatccaaacgcgt
aattatgaaaaccaacaaggtcaacgtatctatgtaacagaagttgttgcggaaaatttc
caattattagaaagtcgcaatagccaacaacagactaatcaaagcggcaatagttctaat
tcttattttggcaatgccaacaaaatggatatttcagatgatgacttaccattctga


  DNA with Flanking Sequence

>fig|208435.3.peg.562 Single-stranded DNA-binding protein
atctttttcgcaggacccgacaacaaacacagaaaacggttatatcgatgttgcaacgct
tgtcatgcacacgagcggcgaatgggttgagtacgggcctttaagtgttaaacctacaaa
aaatgatgtacaaggcgctggttcggctatcacttacgcaaaacgctatgcactatcggc
aatttttgggataacaagcgatcaagatgatgacggcaacgaagatagtaaaccaaacaa
ttccaggcaatcgccaaaagctacaactaaaaaaacacaaaagacaggatatcaaacacc
aaaaatcagcaatatccaaatcgagacttacaagtctgatttaaatgatattgcgaaagc
cacaaaccaaaacgttgaagagttaacaaaatggctaaccgatactttaaaagtggggga
actagaaaatttgcatacggaacacattgtttcagcagacgaattaatcaataaactcaa
aaagaaagcaggactaaaaaatgattaacaacattgtactagtaggtcgcatgaccaagg
atgccgaacttcgttatacaccaagtaatcaagcggtagctactttttcacttgcagtta
atcgtaattttaaaaatcaatctggcgaacgtgaggctgattttattaactgtgttattt
ggcgccaacaagctgaaaacttggctaactgggcaaaaaaaggtgctttggttggaatta
caggtcgtatccaaacgcgtaattatgaaaaccaacaaggtcaacgtatctatgtaacag
aagttgttgcggaaaatttccaattattagaaagtcgcaatagccaacaacagactaatc
aaagcggcaatagttctaattcttattttggcaatgccaacaaaatggatatttcagatg
atgacttaccattctgagtgtttcgctaagcttctctcaatctaacaggtgaaagtcctg
tcctaacaattaaccagttcggttaggtagctatggcatacgtatgcggagtaatccaaa
tgcggaagcaatgccgactaacgttatccccagtaggctgatattcattggtcttatctc
agtccgtgggagcgagcaaacctacagtccgtaacgaaagtgaacttccgctaagtgtcg
ttaaggtcattccaatgagtataactgagagagttggaaatagagttgtcgagcctttag
aatgggggcgaagactggaattgttgtcagttctaactggtatatactggcaataaagct
ctcggcatatagaagatggaatgtaggtaaagatgagcgaggaacgaaagagaccctttt
ctatcatacatatcccatgtatgtaaggttagatataaggaaaacaccgaagttctaatt
gacgtaggaatagggagtcggagaggttcatagtacc


  Assignments for Essentially Identical Proteins

No essentially identical proteins found

  Links to Related Entries in Other Sites

This PEG has no links.
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  Functional Coupling

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  Attributes

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  Protein Families

No protein families found

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