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SEED version cvs.1555556707 (3/17/2019 22:5:7) on gum.mcs.anl.gov
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Protein fig|208435.3.peg.557: Streptococcus agalactiae 2603V/R

This feature in The SEED Viewer

NCBI Taxonomy Id: 208435

Current Assignment: Phage protein
Translate Function Assignments



Context on contig NC_004116 from base 560893 to 571847 (10955 bp)

Fid Start End Size
(nt)
  Gap Find
best
clusters
Pins Fc-sc SS Ev Function Aliases
544 561690 560893 798 -           Phage CI-like repressor locus|SAG0548, protein_id|NP_687577.1, gi|22536726, geneID|1013352
545 562051 562194 144 + 360         hypothetical protein locus|SAG0549, protein_id|NP_687578.1, gi|22536727, geneID|1013353
546 562415 562191 225 - -4         hypothetical protein locus|SAG0550, protein_id|NP_687579.1, gi|22536728, geneID|1013354
547 562474 562632 159 + 58         FIG01115240: hypothetical protein locus|SAG0551, protein_id|NP_687580.1, gi|22536729, geneID|1013355
548 562662 562850 189 + 29         hypothetical protein locus|SAG0552, protein_id|NP_687581.1, gi|22536730, geneID|1013356
549 563639 562833 807 - -18         hypothetical protein locus|SAG0553, protein_id|NP_687582.1, gi|22536731, geneID|1013357
550 563691 563882 192 + 51         prophage LambdaSa1, transcriptional regulator, Cro/CI family locus|SAG0554, protein_id|NP_687583.1, gi|22536732, geneID|1013358
551 563950 564699 750 + 67         Phage antirepressor protein locus|SAG0555, protein_id|NP_687584.1, gi|22536733, geneID|1013359
552 564711 564854 144 + 11         hypothetical protein locus|SAG0556, protein_id|NP_687585.1, gi|22536734, geneID|1013360
553 565004 565234 231 + 149         hypothetical protein locus|SAG0557, protein_id|NP_687586.1, gi|22536735, geneID|1013361
554 565372 565596 225 + 137         hypothetical protein locus|SAG0558, protein_id|NP_687587.1, gi|22536736, geneID|1013362
555 565607 566467 861 + 10         DNA replication protein dnaD locus|SAG0559, protein_id|NP_687588.1, gi|22536737, geneID|1013363
556 566448 566681 234 + -20         hypothetical protein locus|SAG0560, protein_id|NP_687589.1, gi|22536738, geneID|1013364
557 566678 566818 141 + -4         Phage protein locus|SAG0561, protein_id|NP_687590.1, gi|22536739, geneID|1013365
558 566829 567083 255 + 10         hypothetical protein - phage associated locus|SAG0562, protein_id|NP_687591.1, gi|22536740, geneID|1013366
559 567086 567247 162 + 2         hypothetical protein locus|SAG0563, protein_id|NP_687592.1, gi|22536741, geneID|1013367
560 567249 567731 483 + 1         hypothetical protein (phage associated) locus|SAG0564, protein_id|NP_687593.1, gi|22536742, geneID|1013368
561 567732 568406 675 + 0         Phage single-strand DNA binding protein locus|SAG0565, protein_id|NP_687594.1, gi|22536743, geneID|1013369
562 568399 568815 417 + -8     3: 1 3 2   Single-stranded DNA-binding protein gene_name|ssb-2, locus|SAG0566, protein_id|NP_687595.1, gi|22536744, geneID|1013370
563 569396 570715 1320 + 580         Retron-type RNA-directed DNA polymerase (EC 2.7.7.49) locus|SAG0567, protein_id|NP_687596.1, gi|22536745, geneID|1013371
564 570841 571044 204 + 125         hypothetical protein locus|SAG0568, protein_id|NP_687597.1, gi|22536746, geneID|1013372
565 571223 571510 288 + 178         Phage Holliday junction resolvase locus|SAG0569, protein_id|NP_687598.1, gi|22536747, geneID|1013373
566 571701 571847 147 + 190         hypothetical protein locus|SAG0570, protein_id|NP_687599.1, gi|22536748, geneID|1013374

Annotation History   /   View All Related Annotations Help on Annotations



  Subsystems in Which This Protein Plays a Role

This PEG is currently not present in any subsytem.

  Protein Sequence

>fig|208435.3.peg.557 Phage protein
MTKQHRETLIWYRASHQEREKLLDFGLVDKSQYVTLLRQLRKKYAI

MD5 = ea38481b9fe53c338a79e7cb99cfabda


  DNA Sequence

>fig|208435.3.peg.557 Phage protein
atgacaaaacaacatagagaaacgcttatctggtaccgagcaagtcatcaagagcgtgag
aagctgcttgattttgggctagttgataaatcacagtacgtgacactattgcggcaattg
cgcaagaaatatgcgatttag


  DNA with Flanking Sequence

>fig|208435.3.peg.557 Phage protein
atgtctcaaaggatttgtttttggaagctgttaaagtagcagttgctaataatgtccgca
aatttaattacatcgctcgcattttggataattggattaatgatgggataaagactcctg
aacaagcatatcaggctcaaagagactttaaagctaaaaaagctaacaaaacaatgcaat
cacaatccaacgttcctagctggtctaatccagactacaaaggaccagatttaaaagaat
ttgcactaggaagcatagacgatatagaagatggatcaggagatttttaatttttttaac
aaacaaatcaaaaaagattttggtaaaacggcgagtaaagagacttttgctaagtttgct
agttactgcgccgaaggaatcgaaaaaaatggagttaagccaatttttaattggataaac
ctatacgcttttggaaccggtatgacaacagcagaagcagaccgattaagaatagagcga
tataaacaggagaatacgttatgacaaaacaacatagagaaacgcttatctggtaccgag
caagtcatcaagagcgtgagaagctgcttgattttgggctagttgataaatcacagtacg
tgacactattgcggcaattgcgcaagaaatatgcgatttaggaagggatatatggttgaa
atcagaattaacggtgagtcaatcacatttgatagcaattttagggatgcgcttatattt
acggtagatcacctaaaaaattatgacgatccttctttgaggcagacttacaacgagttt
aaagattatacagacgaggacttgatgggatatatcagcacagaatttgatgtagacccg
gaaatgtttgttgatactaattcagacagcagatggaaaattaaacaacgaattttagag
gactgactgtgaacgaagaaatatatgagtctagtcgttactggcaaagtagatacagcg
acttgatgtctgattatcttaaagaagctgaagaaaatatagagttaaagaaacagttga
agagattaaaagccgaaaattggcagctgaaacacagaaagaggaaatgatatggcttat
ttatacgaattagaaggtatttacgcacaattacagtcaatggatttagacgaagaaaca
t


  Assignments for Essentially Identical Proteins

Id Organism Who ASSIGN Assignment
cmr|SAG_0561 Streptococcus agalactiae 2603V/R     hypothetical protein
cmr|SAL_0632 Streptococcus agalactiae 515     conserved hypothetical protein
fig|208435.1.peg.554 Streptococcus agalactiae 2603V/R FIG   Phage protein
fig|342614.4.peg.1475 Streptococcus agalactiae 515 FIG   Phage protein
gb|AAM99462.1 Streptococcus agalactiae 2603V/R     hypothetical protein SAG0561
gb|AE014217_17 Streptococcus agalactiae 2603V/R     hypothetical protein SAG0561
gb|EAO70789.1 Streptococcus agalactiae 515     conserved hypothetical protein
gi|22533582 Streptococcus agalactiae 2603V/R NCBI   hypothetical protein SAG0561
gi|22536739 Streptococcus agalactiae 2603V/R NCBI   hypothetical protein SAG0561
gi|77159635 Streptococcus agalactiae 515 NCBI   conserved hypothetical protein
gi|77414343 Streptococcus agalactiae 515 NCBI   conserved hypothetical protein
img|637315763 Streptococcus agalactiae 2603V/R IMG   hypothetical protein
img|638646943 Streptococcus agalactiae 515 IMG   conserved hypothetical protein
kegg|sag:SAG0561 Streptococcus agalactiae 2603 (serotype V) KEGG   hypothetical protein
ref|NP_687590.1 Streptococcus agalactiae 2603V/R RefSeq   hypothetical protein SAG0561
ref|ZP_00790500.1 Streptococcus agalactiae 515 RefSeq   conserved hypothetical protein
tr|Q3DK01 Streptococcus agalactiae 515 TrEMBL   Putative uncharacterized protein
tr|Q8E104 Streptococcus agalactiae serotype V TrEMBL   Putative uncharacterized protein


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  Functional Coupling

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  Attributes

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  Protein Families

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