The SEED: an Annotation/Analysis Tool Provided by FIG
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Fid | Start | End | Size (nt) |
Gap | Find best clusters |
Pins | Fc-sc | SS | Ev | Function | Aliases | |
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541 | 559905 | 558826 | 1080 | - | ![]() |
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8 | Integrase | locus|SAG0545, protein_id|NP_687574.1, gi|22536723, geneID|1013349 | |||
542 | 560092 | 559910 | 183 | - | 4 | ![]() |
hypothetical protein | |||||
543 | 560891 | 560334 | 558 | - | 241 | ![]() |
hypothetical protein | locus|SAG0547, protein_id|NP_687576.1, gi|22536725, geneID|1013351 | ||||
544 | 561690 | 560893 | 798 | - | 1 | ![]() |
Phage CI-like repressor | locus|SAG0548, protein_id|NP_687577.1, gi|22536726, geneID|1013352 | ||||
545 | 562051 | 562194 | 144 | + | 360 | ![]() |
hypothetical protein | locus|SAG0549, protein_id|NP_687578.1, gi|22536727, geneID|1013353 | ||||
546 | 562415 | 562191 | 225 | - | -4 | ![]() |
hypothetical protein | locus|SAG0550, protein_id|NP_687579.1, gi|22536728, geneID|1013354 | ||||
547 | 562474 | 562632 | 159 | + | 58 | ![]() |
FIG01115240: hypothetical protein | locus|SAG0551, protein_id|NP_687580.1, gi|22536729, geneID|1013355 | ||||
548 | 562662 | 562850 | 189 | + | 29 | ![]() |
hypothetical protein | locus|SAG0552, protein_id|NP_687581.1, gi|22536730, geneID|1013356 | ||||
549 | 563639 | 562833 | 807 | - | -18 | ![]() |
hypothetical protein | locus|SAG0553, protein_id|NP_687582.1, gi|22536731, geneID|1013357 | ||||
550 | 563691 | 563882 | 192 | + | 51 | ![]() |
prophage LambdaSa1, transcriptional regulator, Cro/CI family | locus|SAG0554, protein_id|NP_687583.1, gi|22536732, geneID|1013358 | ||||
551 | 563950 | 564699 | 750 | + | 67 | ![]() |
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Phage antirepressor protein | locus|SAG0555, protein_id|NP_687584.1, gi|22536733, geneID|1013359 | |||
552 | 564711 | 564854 | 144 | + | 11 | ![]() |
hypothetical protein | locus|SAG0556, protein_id|NP_687585.1, gi|22536734, geneID|1013360 | ||||
553 | 565004 | 565234 | 231 | + | 149 | ![]() |
hypothetical protein | locus|SAG0557, protein_id|NP_687586.1, gi|22536735, geneID|1013361 | ||||
554 | 565372 | 565596 | 225 | + | 137 | ![]() |
hypothetical protein | locus|SAG0558, protein_id|NP_687587.1, gi|22536736, geneID|1013362 | ||||
555 | 565607 | 566467 | 861 | + | 10 | ![]() |
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4 | DNA replication protein dnaD | locus|SAG0559, protein_id|NP_687588.1, gi|22536737, geneID|1013363 | ||
556 | 566448 | 566681 | 234 | + | -20 | ![]() |
hypothetical protein | locus|SAG0560, protein_id|NP_687589.1, gi|22536738, geneID|1013364 | ||||
557 | 566678 | 566818 | 141 | + | -4 | ![]() |
Phage protein | locus|SAG0561, protein_id|NP_687590.1, gi|22536739, geneID|1013365 | ||||
558 | 566829 | 567083 | 255 | + | 10 | ![]() |
hypothetical protein - phage associated | locus|SAG0562, protein_id|NP_687591.1, gi|22536740, geneID|1013366 | ||||
559 | 567086 | 567247 | 162 | + | 2 | ![]() |
hypothetical protein | locus|SAG0563, protein_id|NP_687592.1, gi|22536741, geneID|1013367 | ||||
560 | 567249 | 567731 | 483 | + | 1 | ![]() |
hypothetical protein (phage associated) | locus|SAG0564, protein_id|NP_687593.1, gi|22536742, geneID|1013368 | ||||
561 | 567732 | 568406 | 675 | + | 0 | ![]() |
Phage single-strand DNA binding protein | locus|SAG0565, protein_id|NP_687594.1, gi|22536743, geneID|1013369 | ||||
562 | 568399 | 568815 | 417 | + | -8 | ![]() |
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4 | 3: 1 3 2 | Single-stranded DNA-binding protein | gene_name|ssb-2, locus|SAG0566, protein_id|NP_687595.1, gi|22536744, geneID|1013370 | |
563 | 569396 | 570715 | 1320 | + | 580 | ![]() |
Retron-type RNA-directed DNA polymerase (EC 2.7.7.49) | locus|SAG0567, protein_id|NP_687596.1, gi|22536745, geneID|1013371 |
Annotation History / View All Related Annotations | Help on Annotations |
Score | Peg | Function |
---|---|---|
8 | fig|208435.3.peg.541 | Integrase |
4 | fig|208435.3.peg.555 | DNA replication protein dnaD |
4 | fig|208435.3.peg.562 | Single-stranded DNA-binding protein |
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