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SEED version cvs.1555556707 (3/17/2019 22:5:7) on gum.mcs.anl.gov
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Protein fig|208435.3.peg.550: Streptococcus agalactiae 2603V/R

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NCBI Taxonomy Id: 208435

Current Assignment: prophage LambdaSa1, transcriptional regulator, Cro/CI family
Translate Function Assignments



Context on contig NC_004116 from base 558712 to 568815 (10104 bp)

Fid Start End Size
(nt)
  Gap Find
best
clusters
Pins Fc-sc SS Ev Function Aliases
rna.91 558712 558783 72 +           tRNA-Arg-CCT  
541 559905 558826 1080 - 42         Integrase locus|SAG0545, protein_id|NP_687574.1, gi|22536723, geneID|1013349
542 560092 559910 183 - 4         hypothetical protein  
543 560891 560334 558 - 241         hypothetical protein locus|SAG0547, protein_id|NP_687576.1, gi|22536725, geneID|1013351
544 561690 560893 798 - 1         Phage CI-like repressor locus|SAG0548, protein_id|NP_687577.1, gi|22536726, geneID|1013352
545 562051 562194 144 + 360         hypothetical protein locus|SAG0549, protein_id|NP_687578.1, gi|22536727, geneID|1013353
546 562415 562191 225 - -4         hypothetical protein locus|SAG0550, protein_id|NP_687579.1, gi|22536728, geneID|1013354
547 562474 562632 159 + 58         FIG01115240: hypothetical protein locus|SAG0551, protein_id|NP_687580.1, gi|22536729, geneID|1013355
548 562662 562850 189 + 29         hypothetical protein locus|SAG0552, protein_id|NP_687581.1, gi|22536730, geneID|1013356
549 563639 562833 807 - -18         hypothetical protein locus|SAG0553, protein_id|NP_687582.1, gi|22536731, geneID|1013357
550 563691 563882 192 + 51         prophage LambdaSa1, transcriptional regulator, Cro/CI family locus|SAG0554, protein_id|NP_687583.1, gi|22536732, geneID|1013358
551 563950 564699 750 + 67         Phage antirepressor protein locus|SAG0555, protein_id|NP_687584.1, gi|22536733, geneID|1013359
552 564711 564854 144 + 11         hypothetical protein locus|SAG0556, protein_id|NP_687585.1, gi|22536734, geneID|1013360
553 565004 565234 231 + 149         hypothetical protein locus|SAG0557, protein_id|NP_687586.1, gi|22536735, geneID|1013361
554 565372 565596 225 + 137         hypothetical protein locus|SAG0558, protein_id|NP_687587.1, gi|22536736, geneID|1013362
555 565607 566467 861 + 10         DNA replication protein dnaD locus|SAG0559, protein_id|NP_687588.1, gi|22536737, geneID|1013363
556 566448 566681 234 + -20         hypothetical protein locus|SAG0560, protein_id|NP_687589.1, gi|22536738, geneID|1013364
557 566678 566818 141 + -4         Phage protein locus|SAG0561, protein_id|NP_687590.1, gi|22536739, geneID|1013365
558 566829 567083 255 + 10         hypothetical protein - phage associated locus|SAG0562, protein_id|NP_687591.1, gi|22536740, geneID|1013366
559 567086 567247 162 + 2         hypothetical protein locus|SAG0563, protein_id|NP_687592.1, gi|22536741, geneID|1013367
560 567249 567731 483 + 1         hypothetical protein (phage associated) locus|SAG0564, protein_id|NP_687593.1, gi|22536742, geneID|1013368
561 567732 568406 675 + 0         Phage single-strand DNA binding protein locus|SAG0565, protein_id|NP_687594.1, gi|22536743, geneID|1013369
562 568399 568815 417 + -8     3: 1 3 2   Single-stranded DNA-binding protein gene_name|ssb-2, locus|SAG0566, protein_id|NP_687595.1, gi|22536744, geneID|1013370

Annotation History   /   View All Related Annotations Help on Annotations



  Subsystems in Which This Protein Plays a Role

This PEG is currently not present in any subsytem.

  Protein Sequence

>fig|208435.3.peg.550 prophage LambdaSa1, transcriptional regulator, Cro/CI family
MQQFNLKQLREKKGFTQNELADKANVSRSLVVGLETGSYSETSTASLKKLAKALDVKIKD
LFF

MD5 = ec47dd8469b7bd47d0f5b1b4f829813c


  DNA Sequence

>fig|208435.3.peg.550 prophage LambdaSa1, transcriptional regulator, Cro/CI family
atgcaacaatttaatctaaaacaactacgagagaaaaaaggatttactcaaaatgaatta
gctgataaagctaacgttagtcgttcgctcgtggttggtttagaaacaggttcatattca
gagacatctacagcatctctgaagaaattggcgaaagctttggacgtaaagattaaggat
ttatttttttaa


  DNA with Flanking Sequence

>fig|208435.3.peg.550 prophage LambdaSa1, transcriptional regulator, Cro/CI family
tctgagataattttgaaattttgtgcatcaattttatcaaactgttttattatctcaata
aaagatggatggttgaattcattttttgatttatccatagatgaagcaatcaattttgta
aataaatttctaagttcttcttcttctaaataaaatttagatgcttctaaagccggtcca
gctatcgaaagactaggttcttgtagattttcaatatttttactaacaacatcttgtatt
tctttagctaatttttgaataaaatcgtttctgttagtaatgtacttatttcttcgattt
tcagctatttcatgtaatttttcaaaaccaattaatgtcattaaatcatcaatagctctt
gcaggattttcagctttctttatggcagtagttcctaagagagtagcagaaccaagcaaa
atcgtctttatatcaagactttcaatcataatacaactccgttttttatttcaattatac
cacagaaagggggtgggggaatgcaacaatttaatctaaaacaactacgagagaaaaaag
gatttactcaaaatgaattagctgataaagctaacgttagtcgttcgctcgtggttggtt
tagaaacaggttcatattcagagacatctacagcatctctgaagaaattggcgaaagctt
tggacgtaaagattaaggatttatttttttaactaatcgtctaacatgatagacaaaata
tttgttaataaaactaacaaaccgctagaaaggaactatatgaatcaactaataaacatc
accctaaacgaaaatcaagaaccagttgtcagtggtagagatttacacaatgtacttaat
ataaaaactcaatatactaaatggcttgaaaggatgtcggaatatggttttgaagaaaac
gttgactatatagctattagtcaaaaaagactaacagctcaaggtaaccgtacagaatat
atagaccacgttctcaagctagacatggcaaaagagattgctatgttacagcgaaacgag
aaatcaaaacaggtacgcaaatacttcatccaggttgaaaaagacttcaatagtcctgag
aaaatcatggcgagagccttgctcatggcagataagaaaatcactaacttaacgatggaa
aataatcaattgcagttagatttaaaagaagctcaaaagcaagcgcgttatc


  Assignments for Essentially Identical Proteins

Id Organism Who ASSIGN Assignment
GO:0043565       F:sequence-specific DNA binding
cmr|SAG_0554 Streptococcus agalactiae 2603V/R     prophage LambdaSa1, transcriptional regulator, Cro/CI family
cmr|SAJ_2144 Streptococcus agalactiae 18RS21     transcription regulator
fig|208435.1.peg.547 Streptococcus agalactiae 2603V/R FIG   hypothetical protein
fig|342613.5.peg.1797 Streptococcus agalactiae 18RS21 FIG   hypothetical protein
gb|AAM99455.1 Streptococcus agalactiae 2603V/R     prophage LambdaSa1, transcriptional regulator, Cro/CI family
gb|AE014217_10 Streptococcus agalactiae 2603V/R     prophage LambdaSa1, transcriptional regulator, Cro/CI family
gb|EAO61725.1 Streptococcus agalactiae 18RS21     transcription regulator
gi|22533575 Streptococcus agalactiae 2603V/R NCBI   prophage LambdaSa1, transcriptional regulator, Cro/CI family
gi|22536732 Streptococcus agalactiae 2603V/R NCBI   prophage LambdaSa1, Cro/CI family transcriptional regulator
gi|76585097 Streptococcus agalactiae 18RS21 NCBI   transcription regulator
gi|76799546 Streptococcus agalactiae 18RS21 NCBI   transcription regulator
img|637315756 Streptococcus agalactiae 2603V/R IMG   prophage LambdaSa1, transcriptional regulator, Cro/CI family
img|638644866 Streptococcus agalactiae 18RS21 IMG   transcription regulator
kegg|sag:SAG0554 Streptococcus agalactiae 2603 (serotype V) KEGG   prophage LambdaSa1, Cro/CI family transcriptional regulator
ref|NP_687583.1 Streptococcus agalactiae 2603V/R RefSeq   prophage LambdaSa1, Cro/CI family transcriptional regulator
ref|ZP_00781676.1 Streptococcus agalactiae 18RS21 RefSeq   transcription regulator
tr|Q3DQB1 Streptococcus agalactiae 18RS21 TrEMBL   Transcription regulator
tr|Q8E111 Streptococcus agalactiae serotype V TrEMBL   Prophage LambdaSa1, transcriptional regulator, Cro/CI family


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  Attributes

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  Protein Families

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