Protein Page for fig|208435.3.peg.550

SEED version cvs.1555556707 (3/17/2019 22:5:7) on gum.mcs.anl.gov

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Protein fig|208435.3.peg.550: Streptococcus agalactiae 2603V/R

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NCBI Taxonomy Id: 208435

Current Assignment: prophage LambdaSa1, transcriptional regulator, Cro/CI family

Translate Function Assignments

Context on contig NC_004116 from base 558712 to 568815 (10104 bp)


Fid	Start	End	Size (nt)		Gap	SS	Function	Aliases
rna.91	558712	558783	72	+			tRNA-Arg-CCT
541	559905	558826	1080	-	42		Integrase	locus\|SAG0545, protein_id\|NP_687574.1, gi\|22536723, geneID\|1013349
542	560092	559910	183	-	4		hypothetical protein
543	560891	560334	558	-	241		hypothetical protein	locus\|SAG0547, protein_id\|NP_687576.1, gi\|22536725, geneID\|1013351
544	561690	560893	798	-	1		Phage CI-like repressor	locus\|SAG0548, protein_id\|NP_687577.1, gi\|22536726, geneID\|1013352
545	562051	562194	144	+	360		hypothetical protein	locus\|SAG0549, protein_id\|NP_687578.1, gi\|22536727, geneID\|1013353
546	562415	562191	225	-	-4		hypothetical protein	locus\|SAG0550, protein_id\|NP_687579.1, gi\|22536728, geneID\|1013354
547	562474	562632	159	+	58		FIG01115240: hypothetical protein	locus\|SAG0551, protein_id\|NP_687580.1, gi\|22536729, geneID\|1013355
548	562662	562850	189	+	29		hypothetical protein	locus\|SAG0552, protein_id\|NP_687581.1, gi\|22536730, geneID\|1013356
549	563639	562833	807	-	-18		hypothetical protein	locus\|SAG0553, protein_id\|NP_687582.1, gi\|22536731, geneID\|1013357
550	563691	563882	192	+	51		prophage LambdaSa1, transcriptional regulator, Cro/CI family	locus\|SAG0554, protein_id\|NP_687583.1, gi\|22536732, geneID\|1013358
551	563950	564699	750	+	67		Phage antirepressor protein	locus\|SAG0555, protein_id\|NP_687584.1, gi\|22536733, geneID\|1013359
552	564711	564854	144	+	11		hypothetical protein	locus\|SAG0556, protein_id\|NP_687585.1, gi\|22536734, geneID\|1013360
553	565004	565234	231	+	149		hypothetical protein	locus\|SAG0557, protein_id\|NP_687586.1, gi\|22536735, geneID\|1013361
554	565372	565596	225	+	137		hypothetical protein	locus\|SAG0558, protein_id\|NP_687587.1, gi\|22536736, geneID\|1013362
555	565607	566467	861	+	10		DNA replication protein dnaD	locus\|SAG0559, protein_id\|NP_687588.1, gi\|22536737, geneID\|1013363
556	566448	566681	234	+	-20		hypothetical protein	locus\|SAG0560, protein_id\|NP_687589.1, gi\|22536738, geneID\|1013364
557	566678	566818	141	+	-4		Phage protein	locus\|SAG0561, protein_id\|NP_687590.1, gi\|22536739, geneID\|1013365
558	566829	567083	255	+	10		hypothetical protein - phage associated	locus\|SAG0562, protein_id\|NP_687591.1, gi\|22536740, geneID\|1013366
559	567086	567247	162	+	2		hypothetical protein	locus\|SAG0563, protein_id\|NP_687592.1, gi\|22536741, geneID\|1013367
560	567249	567731	483	+	1		hypothetical protein (phage associated)	locus\|SAG0564, protein_id\|NP_687593.1, gi\|22536742, geneID\|1013368
561	567732	568406	675	+	0		Phage single-strand DNA binding protein	locus\|SAG0565, protein_id\|NP_687594.1, gi\|22536743, geneID\|1013369
562	568399	568815	417	+	-8	3: 1 3 2	Single-stranded DNA-binding protein	gene_name\|ssb-2, locus\|SAG0566, protein_id\|NP_687595.1, gi\|22536744, geneID\|1013370

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Subsystems in Which This Protein Plays a Role

This PEG is currently not present in any subsytem.

Protein Sequence

>fig|208435.3.peg.550 prophage LambdaSa1, transcriptional regulator, Cro/CI family
MQQFNLKQLREKKGFTQNELADKANVSRSLVVGLETGSYSETSTASLKKLAKALDVKIKD
LFF

MD5 = ec47dd8469b7bd47d0f5b1b4f829813c

DNA Sequence

>fig|208435.3.peg.550 prophage LambdaSa1, transcriptional regulator, Cro/CI family
atgcaacaatttaatctaaaacaactacgagagaaaaaaggatttactcaaaatgaatta
gctgataaagctaacgttagtcgttcgctcgtggttggtttagaaacaggttcatattca
gagacatctacagcatctctgaagaaattggcgaaagctttggacgtaaagattaaggat
ttatttttttaa

DNA with Flanking Sequence

>fig|208435.3.peg.550 prophage LambdaSa1, transcriptional regulator, Cro/CI family
tctgagataattttgaaattttgtgcatcaattttatcaaactgttttattatctcaata
aaagatggatggttgaattcattttttgatttatccatagatgaagcaatcaattttgta
aataaatttctaagttcttcttcttctaaataaaatttagatgcttctaaagccggtcca
gctatcgaaagactaggttcttgtagattttcaatatttttactaacaacatcttgtatt
tctttagctaatttttgaataaaatcgtttctgttagtaatgtacttatttcttcgattt
tcagctatttcatgtaatttttcaaaaccaattaatgtcattaaatcatcaatagctctt
gcaggattttcagctttctttatggcagtagttcctaagagagtagcagaaccaagcaaa
atcgtctttatatcaagactttcaatcataatacaactccgttttttatttcaattatac
cacagaaagggggtgggggaatgcaacaatttaatctaaaacaactacgagagaaaaaag
gatttactcaaaatgaattagctgataaagctaacgttagtcgttcgctcgtggttggtt
tagaaacaggttcatattcagagacatctacagcatctctgaagaaattggcgaaagctt
tggacgtaaagattaaggatttatttttttaactaatcgtctaacatgatagacaaaata
tttgttaataaaactaacaaaccgctagaaaggaactatatgaatcaactaataaacatc
accctaaacgaaaatcaagaaccagttgtcagtggtagagatttacacaatgtacttaat
ataaaaactcaatatactaaatggcttgaaaggatgtcggaatatggttttgaagaaaac
gttgactatatagctattagtcaaaaaagactaacagctcaaggtaaccgtacagaatat
atagaccacgttctcaagctagacatggcaaaagagattgctatgttacagcgaaacgag
aaatcaaaacaggtacgcaaatacttcatccaggttgaaaaagacttcaatagtcctgag
aaaatcatggcgagagccttgctcatggcagataagaaaatcactaacttaacgatggaa
aataatcaattgcagttagatttaaaagaagctcaaaagcaagcgcgttatc

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  Functional Coupling


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