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SEED version cvs.1555556707 (3/17/2019 22:5:7) on gum.mcs.anl.gov
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Protein fig|208435.3.peg.544: Streptococcus agalactiae 2603V/R

This feature in The SEED Viewer

NCBI Taxonomy Id: 208435

Current Assignment: Phage CI-like repressor
Translate Function Assignments



Context on contig NC_004116 from base 555617 to 566818 (11202 bp)

Fid Start End Size
(nt)
  Gap Find
best
clusters
Pins Fc-sc SS Ev Function Aliases
537 555617 556813 1197 +       1: 1   EriC-type fluoride/proton exchange protein locus|SAG0541, protein_id|NP_687570.1, gi|22536719, geneID|1013344
538 557266 557649 384 + 452         IS1381, transposase OrfA locus|SAG0542, protein_id|NP_687571.1, gi|22536720, geneID|1013345
539 557682 558071 390 + 32         Mobile element protein locus|SAG0543, protein_id|NP_687572.1, gi|22536721, geneID|1013346
540 558254 558601 348 + 182     4: 5 4 2 3   LSU ribosomal protein L19p gene_name|rplS, locus|SAG0544, protein_id|NP_687573.1, gi|22536722, geneID|1013347
rna.91 558712 558783 72 + 110         tRNA-Arg-CCT  
541 559905 558826 1080 - 42         Integrase locus|SAG0545, protein_id|NP_687574.1, gi|22536723, geneID|1013349
542 560092 559910 183 - 4         hypothetical protein  
543 560891 560334 558 - 241         hypothetical protein locus|SAG0547, protein_id|NP_687576.1, gi|22536725, geneID|1013351
544 561690 560893 798 - 1       Phage CI-like repressor locus|SAG0548, protein_id|NP_687577.1, gi|22536726, geneID|1013352
545 562051 562194 144 + 360         hypothetical protein locus|SAG0549, protein_id|NP_687578.1, gi|22536727, geneID|1013353
546 562415 562191 225 - -4         hypothetical protein locus|SAG0550, protein_id|NP_687579.1, gi|22536728, geneID|1013354
547 562474 562632 159 + 58         FIG01115240: hypothetical protein locus|SAG0551, protein_id|NP_687580.1, gi|22536729, geneID|1013355
548 562662 562850 189 + 29         hypothetical protein locus|SAG0552, protein_id|NP_687581.1, gi|22536730, geneID|1013356
549 563639 562833 807 - -18         hypothetical protein locus|SAG0553, protein_id|NP_687582.1, gi|22536731, geneID|1013357
550 563691 563882 192 + 51         prophage LambdaSa1, transcriptional regulator, Cro/CI family locus|SAG0554, protein_id|NP_687583.1, gi|22536732, geneID|1013358
551 563950 564699 750 + 67 4     Phage antirepressor protein locus|SAG0555, protein_id|NP_687584.1, gi|22536733, geneID|1013359
552 564711 564854 144 + 11         hypothetical protein locus|SAG0556, protein_id|NP_687585.1, gi|22536734, geneID|1013360
553 565004 565234 231 + 149         hypothetical protein locus|SAG0557, protein_id|NP_687586.1, gi|22536735, geneID|1013361
554 565372 565596 225 + 137         hypothetical protein locus|SAG0558, protein_id|NP_687587.1, gi|22536736, geneID|1013362
555 565607 566467 861 + 10         DNA replication protein dnaD locus|SAG0559, protein_id|NP_687588.1, gi|22536737, geneID|1013363
556 566448 566681 234 + -20         hypothetical protein locus|SAG0560, protein_id|NP_687589.1, gi|22536738, geneID|1013364
557 566678 566818 141 + -4         Phage protein locus|SAG0561, protein_id|NP_687590.1, gi|22536739, geneID|1013365

Annotation History   /   View All Related Annotations Help on Annotations



  Subsystems in Which This Protein Plays a Role

This PEG is currently not present in any subsytem.

  Protein Sequence

>fig|208435.3.peg.544 Phage CI-like repressor
MHLGKYIKKYRDTNNLSMAEFAKESGISKAYVSILEKNRDPRNGKEIIPSIPIIKKVSDT
IGISFDDLLNSLDENQIVALNETKTEKNLTSSTLQKITSTSSQLEQPRQEKVLSFANEQL
EEQNKVVSMFDRKVEETENYITDYVEGLVAAGLGAYQEDNLHMEVKLRADDVPDKYDTIA
KVAGNSMEPLIQDNDLLFVKVSSQVDMNDIGIFQVNGKNFVKKLKRDYDGAWYLQSLNKS
YEEIYLSENDNIRTIGEVVDIYREN

MD5 = 360b306f0458a93db5f9474fceb0d010


  DNA Sequence

>fig|208435.3.peg.544 Phage CI-like repressor
atgcatctaggaaaatatataaaaaagtatcgagataccaataatctgagcatggctgaa
ttcgctaaagaatcaggcatcagcaaagcttacgtttctattcttgaaaaaaacagagat
cctcgtaacggaaaagaaatcatcccatctattccgattataaagaaagtttctgacaca
attggcatctcttttgatgatttattaaattcgctagacgaaaatcagatagtcgcgtta
aatgaaacgaaaactgaaaaaaatctaacttcctctaccctacaaaaaatcacttctact
tcttctcaattagaacaacctagacaagaaaaagtccttagcttcgctaacgaacaatta
gaagaacaaaataaagttgtttctatgttcgatagaaaagttgaggagacagaaaattat
atcactgactacgttgaggggttagttgctgctggtctgggggcataccaagaagacaat
ttacatatggaagttaaactacgggctgatgatgtccccgataagtatgatactattgcg
aaagtagctggtaattcaatggaaccacttattcaagataacgatttactgttcgtcaag
gtatctagtcaagtcgatatgaatgatatagggatattccaagtcaatggaaaaaacttt
gtaaaaaaactcaaacgtgattatgacggcgcttggtacttgcaaagtttaaataaaagc
tatgaggaaatctatctttcagagaacgacaacatccgcacgataggagaagtcgtagat
atttacagggagaattaa


  DNA with Flanking Sequence

>fig|208435.3.peg.544 Phage CI-like repressor
tcataattaggggttaacctaatcacgtatccatcagcaggggttgcttccgtcaaagta
acttctgctatttttttgccatcttctgtctctacgacaagttttgtgtagcgcttagag
ttcaatatagattcttccacatctactctcctttcattcttgcggagatacagccaatgt
gctaaactaaacttaccccgttaggggagagggcttcttagccctcttggtattgtcacc
actctattgagtagtgaatcctaagcttaaaccaaagaatgtgaatttccaactcgactt
ctttgtgtttaggctttttgtttagcctagatttcattagctgtacctcctttcgttttg
cttaattccttaagcttgattatagtctaacatgttagacaaatgattgtcaagtatgtt
ggacaaaaaacttgaaaaaaatttttttgtactgtataatatgtttaaaatgttagacat
tatattgaaaggaattcgatatgcatctaggaaaatatataaaaaagtatcgagatacca
ataatctgagcatggctgaattcgctaaagaatcaggcatcagcaaagcttacgtttcta
ttcttgaaaaaaacagagatcctcgtaacggaaaagaaatcatcccatctattccgatta
taaagaaagtttctgacacaattggcatctcttttgatgatttattaaattcgctagacg
aaaatcagatagtcgcgttaaatgaaacgaaaactgaaaaaaatctaacttcctctaccc
tacaaaaaatcacttctacttcttctcaattagaacaacctagacaagaaaaagtcctta
gcttcgctaacgaacaattagaagaacaaaataaagttgtttctatgttcgatagaaaag
ttgaggagacagaaaattatatcactgactacgttgaggggttagttgctgctggtctgg
gggcataccaagaagacaatttacatatggaagttaaactacgggctgatgatgtccccg
ataagtatgatactattgcgaaagtagctggtaattcaatggaaccacttattcaagata
acgatttactgttcgtcaaggtatctagtcaagtcgatatgaatgatatagggatattcc
aagtcaatggaaaaaactttgtaaaaaaactcaaacgtgattatgacggcgcttggtact
tgcaaagtttaaataaaagctatgaggaaatctatctttcagagaacgacaacatccgca
cgataggagaagtcgtagatatttacagggagaattaatatgctggaaaaagttgaacgc
ttaatctcggaaattaatagaatacaccttgtttattcgcaagattattttgaaactggg
aaagttgaaaagattaatctaaaacataccttttcaaaagtacctgttcaagcgatttta
gattaccgcttgaatttacacgaatctatcaatgattacttgatgaaagctgatgttaag
gatattccttatgtctatcgcgtaaaaacatcggaaagtatcttagacaaaattgaacgt
ttttccaaaagacaagatggttatcctgtgaattctattctcaatgacatttttggcgct
cgtatcattttatcttctgaggatatttcacaagtgatggaacaacttgatgaatggaaa
gataagtttgacttaaaaaactggtatttacgagataaagataattacacaggaatacac
gtttatttcaagaataagagcaatcactactatccttgggagttgcaaatttgggatg


  Assignments for Essentially Identical Proteins

Id Organism Who ASSIGN Assignment
GO:0043565       F:sequence-specific DNA binding
cmr|SAG_0548 Streptococcus agalactiae 2603V/R     prophage LambdaSa1, repressor protein, putative
fig|208435.1.peg.541 Streptococcus agalactiae 2603V/R FIG   Phage CI-like repressor
gb|AAM99449.1 Streptococcus agalactiae 2603V/R     prophage LambdaSa1, repressor protein, putative
gb|AE014217_4 Streptococcus agalactiae 2603V/R     prophage LambdaSa1, repressor protein, putative
gi|22533569 Streptococcus agalactiae 2603V/R NCBI   prophage LambdaSa1, repressor protein, putative
gi|22536726 Streptococcus agalactiae 2603V/R NCBI   prophage LambdaSa1, repressor protein, putative
img|637315750 Streptococcus agalactiae 2603V/R IMG   prophage LambdaSa1, repressor protein, putative
kegg|sag:SAG0548 Streptococcus agalactiae 2603 (serotype V) KEGG   prophage LambdaSa1, repressor protein, putative
ref|NP_687577.1 Streptococcus agalactiae 2603V/R RefSeq   prophage LambdaSa1, repressor protein, putative
tr|Q8E117 Streptococcus agalactiae serotype V TrEMBL   Prophage LambdaSa1, repressor protein, putative


  Links to Related Entries in Other Sites

This PEG has no links.
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  Functional Coupling

Score Peg Function
4 fig|208435.3.peg.551 Phage antirepressor protein


  Attributes

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  Protein Families

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