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SEED version cvs.1555556707 (3/17/2019 22:5:7) on gum.mcs.anl.gov
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Protein fig|208435.3.peg.541: Streptococcus agalactiae 2603V/R

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NCBI Taxonomy Id: 208435

Current Assignment: Integrase
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Context on contig NC_004116 from base 553748 to 564854 (11107 bp)

Fid Start End Size
(nt)		   Gap Find
best
clusters		 Pins Fc-sc SS Ev Function Aliases
534 553748 554770 1023 +       3: 10 6 7   Adenosine deaminase (EC 3.5.4.4) locus|SAG0538, protein_id|NP_687567.1, gi|22536716, geneID|1013341
535 554829 555272 444 + 58     1: 9   Flavodoxin locus|SAG0539, protein_id|NP_687568.1, gi|22536717, geneID|1013342
536 555349 555624 276 + 76     5: 3 5 13 1 2   Chorismate mutase I (EC 5.4.99.5) locus|SAG0540, protein_id|NP_687569.1, gi|22536718, geneID|1013343
537 555617 556813 1197 + -8     1: 4   EriC-type fluoride/proton exchange protein locus|SAG0541, protein_id|NP_687570.1, gi|22536719, geneID|1013344
538 557266 557649 384 + 452         IS1381, transposase OrfA locus|SAG0542, protein_id|NP_687571.1, gi|22536720, geneID|1013345
539 557682 558071 390 + 32         Mobile element protein locus|SAG0543, protein_id|NP_687572.1, gi|22536721, geneID|1013346
540 558254 558601 348 + 182     4: 8 14 11 12   LSU ribosomal protein L19p gene_name|rplS, locus|SAG0544, protein_id|NP_687573.1, gi|22536722, geneID|1013347
rna.91 558712 558783 72 + 110         tRNA-Arg-CCT  
541 559905 558826 1080 - 42       Integrase locus|SAG0545, protein_id|NP_687574.1, gi|22536723, geneID|1013349
542 560092 559910 183 - 4         hypothetical protein  
543 560891 560334 558 - 241         hypothetical protein locus|SAG0547, protein_id|NP_687576.1, gi|22536725, geneID|1013351
544 561690 560893 798 - 1         Phage CI-like repressor locus|SAG0548, protein_id|NP_687577.1, gi|22536726, geneID|1013352
545 562051 562194 144 + 360         hypothetical protein locus|SAG0549, protein_id|NP_687578.1, gi|22536727, geneID|1013353
546 562415 562191 225 - -4         hypothetical protein locus|SAG0550, protein_id|NP_687579.1, gi|22536728, geneID|1013354
547 562474 562632 159 + 58         FIG01115240: hypothetical protein locus|SAG0551, protein_id|NP_687580.1, gi|22536729, geneID|1013355
548 562662 562850 189 + 29         hypothetical protein locus|SAG0552, protein_id|NP_687581.1, gi|22536730, geneID|1013356
549 563639 562833 807 - -18         hypothetical protein locus|SAG0553, protein_id|NP_687582.1, gi|22536731, geneID|1013357
550 563691 563882 192 + 51         prophage LambdaSa1, transcriptional regulator, Cro/CI family locus|SAG0554, protein_id|NP_687583.1, gi|22536732, geneID|1013358
551 563950 564699 750 + 67 11     Phage antirepressor protein locus|SAG0555, protein_id|NP_687584.1, gi|22536733, geneID|1013359
552 564711 564854 144 + 11         hypothetical protein locus|SAG0556, protein_id|NP_687585.1, gi|22536734, geneID|1013360

Annotation History   /   View All Related Annotations Help on Annotations


  Subsystems in Which This Protein Plays a Role

This PEG is currently not present in any subsytem.

  Protein Sequence

>fig|208435.3.peg.541 Integrase
MWIEELANGKFKYIERYTDPLTNKYKKVSVTLDKNSSQAQKKAGLILQEKIEDRLAIRNH
SEMTYGELKKEYLKQWIPTVKDSTKRGYLVSDSHIATVLPDDTIINKLTKRDIRLIIDKL
LKHNSYHVTHKCRKRLHAIFSYAIQMDYMTSNPTENVLVPKPKDDYKPEKVLYLTSNEVY
DLCNRMIDNDEQTLADIVLFMFLTGVRYGELSCLTYDKIDFENKEILINATYDFNTREIT
TTKTKKSTRKISVSDNILDIVNRQKKTSSFVFPNSNGVPILNAYINKRLKIYGDYHTHLF
RHSHISFLAEKGIPLNAIMDRVGHSDPKTTLSIYSHTTVNMKEIINKQTAPFVPLLKSE

MD5 = dae02505f217677d11e341b6f2b3e67c


  DNA Sequence

>fig|208435.3.peg.541 Integrase
atgtggatagaggagctagccaacgggaaatttaaatatatcgaaagatatactgaccct
ctaacaaataagtacaaaaaagtatctgtgacactagataaaaattctagtcaagctcag
aaaaaagctggtttaatattgcaggaaaagattgaagataggctcgctatcagaaatcac
tcagaaatgacttacggagaacttaaaaaggaatatctaaagcaatggataccgaccgtc
aaagactccacaaaacgtggttatttagtatctgacagtcatatagcaaccgtgttacca
gatgatacaattatcaacaagttgactaaacgtgatattagactaatcattgataaacta
ttaaaacacaattcgtatcatgttacgcataaatgtagaaagagattgcatgccatattt
tcttatgcgatacaaatggactatatgacaagtaatccgacggagaacgtcttagttccc
aaaccaaaggatgattacaagcctgaaaaggtgctttatttaacatctaacgaggtttac
gacctgtgcaatagaatgatagacaatgacgaacaaacgctcgcagacatcgttttattc
atgtttttgacgggtgtacggtatggagaattatcttgtctgacttacgacaaaatagat
tttgaaaataaagaaattctgattaatgcaacttacgattttaacacacgagaaatcact
acgaccaagaccaaaaaatcaacacgcaaaatatctgtatcagataatattttagatatc
gtcaatagacagaaaaagacaagttcattcgtctttccaaattcgaacggtgtaccgatt
ttaaacgcgtacatcaataagcgattgaaaatttatggagattatcacacgcacttattt
agacactcgcatatatcatttttagcagaaaaagggataccgctaaatgcgataatggat
agagttggtcacagcgatccaaaaacaacattatctatttacagtcacacaactgtaaat
atgaaagaaattataaataaacaaactgccccttttgtgccccttttaaaatcggaataa


  DNA with Flanking Sequence

>fig|208435.3.peg.541 Integrase
caaatttgggatgagaaagatgttgatcagaacattgaaagccataaattatttaaacgt
cattttgtataacgtgccattttaccccagtcgaaacgtaaataggaaaattaataacta
tgtgtaatatctgaaccacgttaaaagctgaaatcaaaattaggagaattaaaaatggga
ttttttgcacagcgttgtccttactgccaaagtacaaaagtacaatttatgaaccaagac
cgtaaaggttttaatggttgtgtcggttgtatcggatttttaattgcttggccgttctta
ttgctaggtttggttgggaaaaagggtaaaaacaactggcattgcacaaattgtggaaga
acgtttaagacaaaataaaaaagccccacgctcaaattttgtccaaggagagcgtgaggc
aaattctagtatagtaaaaacctgctttttgggaggggtttttaccatacctattttaac
agaaaatgaggtataaaacaatgtggatagaggagctagccaacgggaaatttaaatata
tcgaaagatatactgaccctctaacaaataagtacaaaaaagtatctgtgacactagata
aaaattctagtcaagctcagaaaaaagctggtttaatattgcaggaaaagattgaagata
ggctcgctatcagaaatcactcagaaatgacttacggagaacttaaaaaggaatatctaa
agcaatggataccgaccgtcaaagactccacaaaacgtggttatttagtatctgacagtc
atatagcaaccgtgttaccagatgatacaattatcaacaagttgactaaacgtgatatta
gactaatcattgataaactattaaaacacaattcgtatcatgttacgcataaatgtagaa
agagattgcatgccatattttcttatgcgatacaaatggactatatgacaagtaatccga
cggagaacgtcttagttcccaaaccaaaggatgattacaagcctgaaaaggtgctttatt
taacatctaacgaggtttacgacctgtgcaatagaatgatagacaatgacgaacaaacgc
tcgcagacatcgttttattcatgtttttgacgggtgtacggtatggagaattatcttgtc
tgacttacgacaaaatagattttgaaaataaagaaattctgattaatgcaacttacgatt
ttaacacacgagaaatcactacgaccaagaccaaaaaatcaacacgcaaaatatctgtat
cagataatattttagatatcgtcaatagacagaaaaagacaagttcattcgtctttccaa
attcgaacggtgtaccgattttaaacgcgtacatcaataagcgattgaaaatttatggag
attatcacacgcacttatttagacactcgcatatatcatttttagcagaaaaagggatac
cgctaaatgcgataatggatagagttggtcacagcgatccaaaaacaacattatctattt
acagtcacacaactgtaaatatgaaagaaattataaataaacaaactgccccttttgtgc
cccttttaaaatcggaataaaacaaaaagcctttaatacaaaggcttttgacgttattta
catgtcccctgccggaatcgaaccagcaattactccttaggagggagttgttatatccat
tgaactaaggggacctagtaaaaaaactgcccacaggcagattttttacgtcttggttgt
ccagttttaaaacatagttactatcctcaaacaaccaagcatttttaaaatctgatcatc
aaaattaacgacggatttctttaatacgtgcagctttaccttgcaatgcgcgtaagtagt
aaagtttagcacgacgtactttaccataacgaacaacttcgattttatcaacacgaggag
tgtgaattgggaatgtacgctctacaccgataccaccagaaattttacgtactgtgtaca
tttctgagattccttgacctttacgtgagataacaacaccttcaaagatctgaatacgtt
cgcgagtaccttcgacaactttagcgtgaacacgtacagt


  Assignments for Essentially Identical Proteins

No essentially identical proteins found

  Links to Related Entries in Other Sites

This PEG has no links.
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  Functional Coupling

Score Peg Function
11 fig|208435.3.peg.551 Phage antirepressor protein


  Attributes

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Key
Link Explains Key		 Value


  Protein Families

No protein families found

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