Protein Page for fig|208435.3.peg.540

SEED version cvs.1555556707 (3/17/2019 22:5:7) on aspen.cels.anl.gov

FIG search

Protein fig|208435.3.peg.540: Streptococcus agalactiae 2603V/R

This feature in The SEED Viewer

NCBI Taxonomy Id: 208435

Current Assignment: LSU ribosomal protein L19p

Translate Function Assignments

Context on contig NC_004116 from base 552547 to 563639 (11093 bp)


Fid	Start	End	Size (nt)		Gap	SS	Function	Aliases
533	553482	552547	936	-		2: 6 5	3'-to-5' oligoribonuclease A, Bacillus type	locus\|SAG0537, protein_id\|NP_687566.1, gi\|22536715, geneID\|1013340
534	553748	554770	1023	+	265	3: 2 9 3	Adenosine deaminase (EC 3.5.4.4)	locus\|SAG0538, protein_id\|NP_687567.1, gi\|22536716, geneID\|1013341
535	554829	555272	444	+	58	1: 14	Flavodoxin	locus\|SAG0539, protein_id\|NP_687568.1, gi\|22536717, geneID\|1013342
536	555349	555624	276	+	76	5: 4 7 1 13 8	Chorismate mutase I (EC 5.4.99.5)	locus\|SAG0540, protein_id\|NP_687569.1, gi\|22536718, geneID\|1013343
537	555617	556813	1197	+	-8	1: 10	EriC-type fluoride/proton exchange protein	locus\|SAG0541, protein_id\|NP_687570.1, gi\|22536719, geneID\|1013344
538	557266	557649	384	+	452		IS1381, transposase OrfA	locus\|SAG0542, protein_id\|NP_687571.1, gi\|22536720, geneID\|1013345
539	557682	558071	390	+	32		Mobile element protein	locus\|SAG0543, protein_id\|NP_687572.1, gi\|22536721, geneID\|1013346
540	558254	558601	348	+	182	4: 16 12 15 11	LSU ribosomal protein L19p	gene_name\|rplS, locus\|SAG0544, protein_id\|NP_687573.1, gi\|22536722, geneID\|1013347
rna.91	558712	558783	72	+	110		tRNA-Arg-CCT
541	559905	558826	1080	-	42		Integrase	locus\|SAG0545, protein_id\|NP_687574.1, gi\|22536723, geneID\|1013349
542	560092	559910	183	-	4		hypothetical protein
543	560891	560334	558	-	241		hypothetical protein	locus\|SAG0547, protein_id\|NP_687576.1, gi\|22536725, geneID\|1013351
544	561690	560893	798	-	1		Phage CI-like repressor	locus\|SAG0548, protein_id\|NP_687577.1, gi\|22536726, geneID\|1013352
545	562051	562194	144	+	360		hypothetical protein	locus\|SAG0549, protein_id\|NP_687578.1, gi\|22536727, geneID\|1013353
546	562415	562191	225	-	-4		hypothetical protein	locus\|SAG0550, protein_id\|NP_687579.1, gi\|22536728, geneID\|1013354
547	562474	562632	159	+	58		FIG01115240: hypothetical protein	locus\|SAG0551, protein_id\|NP_687580.1, gi\|22536729, geneID\|1013355
548	562662	562850	189	+	29		hypothetical protein	locus\|SAG0552, protein_id\|NP_687581.1, gi\|22536730, geneID\|1013356
549	563639	562833	807	-	-18		hypothetical protein	locus\|SAG0553, protein_id\|NP_687582.1, gi\|22536731, geneID\|1013357

Annotation History / View All Related Annotations

Help on Annotations

Subsystems in Which This Protein Plays a Role


Subsystem	Curator	Role
Ribosome_LSU_bacterial	gjo	LSU ribosomal protein L19p
Ribospme_LSU_Symbiont	vcrecy	LSU ribosomal protein L19p
Single-copy_ribosomal_proteins	gjo	LSU ribosomal protein L19p
PanGenomes_ForPhylogeny_Str	Ravcheev_Dmitry_user	LSU ribosomal protein L19p

Protein Sequence

>fig|208435.3.peg.540 LSU ribosomal protein L19p
MNPLIQSLTEGQLRSDIPEFRAGDTVRVHAKVVEGTRERIQIFEGVVISRKGQGISEMYT
VRKISGGIGVERTFPIHTPRVDKIEVVRYGKVRRAKLYYLRALQGKAARIKEIRR

MD5 = 87b150829e3e4862eae1f312f77eca6a

DNA Sequence

>fig|208435.3.peg.540 LSU ribosomal protein L19p
atgaatccattaattcaaagtttgacagaaggtcaacttcgttctgatatccctgagttc
cgtgctggtgatactgtacgtgttcacgctaaagttgtcgaaggtactcgcgaacgtatt
cagatctttgaaggtgttgttatctcacgtaaaggtcaaggaatctcagaaatgtacaca
gtacgtaaaatttctggtggtatcggtgtagagcgtacattcccaattcacactcctcgt
gttgataaaatcgaagttgttcgttatggtaaagtacgtcgtgctaaactttactactta
cgcgcattgcaaggtaaagctgcacgtattaaagaaatccgtcgttaa

DNA with Flanking Sequence

>fig|208435.3.peg.540 LSU ribosomal protein L19p
gatatgaagttgttcaaaatgagtcgcagaaacatcggacaagctgctaaaatcttggca
gacagtggttatcaagggatcatgaagatgtattcacaagcgcaaactccgaggaaatca
agcaaacttaagccactaactcttgaagataaaacctataaccatacgctatccaaagag
agaatcaaggttgagaatatttttgccaaagtaaaaacgtttaaaatattttcaacaacc
tatcgaaatcgacgcaaacggtttggattacgaatgaatttgattgctggaatgatcaac
cgtgaactaggattttagtttcgcaggaagtctaatatacaaataactattctaaaggat
gacaccttgttcttctagataaaatagctttacaagtaggttaaaatttggtagaattgt
gagagtgtgtgatggacgcacaaaaaacggctaatccgctgagacaagtacttaagatta
gtaagagaaggagaataaaaatgaatccattaattcaaagtttgacagaaggtcaacttc
gttctgatatccctgagttccgtgctggtgatactgtacgtgttcacgctaaagttgtcg
aaggtactcgcgaacgtattcagatctttgaaggtgttgttatctcacgtaaaggtcaag
gaatctcagaaatgtacacagtacgtaaaatttctggtggtatcggtgtagagcgtacat
tcccaattcacactcctcgtgttgataaaatcgaagttgttcgttatggtaaagtacgtc
gtgctaaactttactacttacgcgcattgcaaggtaaagctgcacgtattaaagaaatcc
gtcgttaattttgatgatcagattttaaaaatgcttggttgtttgaggatagtaactatg
ttttaaaactggacaaccaagacgtaaaaaatctgcctgtgggcagtttttttactaggt
ccccttagttcaatggatataacaactccctcctaaggagtaattgctggttcgattccg
gcaggggacatgtaaataacgtcaaaagcctttgtattaaaggctttttgttttattccg
attttaaaaggggcacaaaaggggcagtttgtttatttataatttctttcatatttacag
ttgtgtgactgtaaatagataatgttgtttttggatcgctgtgaccaactctatccatta
tcgcatttagcggtatccctttttctgctaaaaatgatatatgcgagtgtctaaataagt
gcgtgtgataatctccataaattttcaatcgcttattgatgtacgcgtttaaaatcggta
caccgttcgaatttggaaagacgaatga

  Assignments for Essentially Identical Proteins

No essentially identical proteins found

  Links to Related Entries in Other Sites

This PEG has no links.
add a new link

  Functional Coupling


Score	Peg	Function

Attributes

Help on Attributes


Key Link Explains Key	Value

Protein Families

No protein families found

Compare Regions

Compared Regions in SeedViewer

Similarities

Help with SEED similarities options

> Show tool descriptions

FIG search