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SEED version cvs.1555556707 (3/17/2019 22:5:7) on gum.mcs.anl.gov
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Protein fig|208435.3.peg.538: Streptococcus agalactiae 2603V/R

This feature in The SEED Viewer

NCBI Taxonomy Id: 208435

Current Assignment: IS1381, transposase OrfA
Translate Function Assignments


Context on contig NC_004116 from base 552178 to 562632 (10455 bp)

Fid Start End Size
(nt)		   Gap Find
best
clusters		 Pins Fc-sc SS Ev Function Aliases
532 552438 552178 261 -       3: 2 1 3   LSU ribosomal protein L31p @ LSU ribosomal protein L31p, zinc-independent gene_name|rpmE2, locus|SAG0536, protein_id|NP_687565.1, gi|22536714, geneID|1013339
533 553482 552547 936 - 108     2: 7 5   3'-to-5' oligoribonuclease A, Bacillus type locus|SAG0537, protein_id|NP_687566.1, gi|22536715, geneID|1013340
534 553748 554770 1023 + 265     3: 10 8 9   Adenosine deaminase (EC 3.5.4.4) locus|SAG0538, protein_id|NP_687567.1, gi|22536716, geneID|1013341
535 554829 555272 444 + 58     1: 16   Flavodoxin locus|SAG0539, protein_id|NP_687568.1, gi|22536717, geneID|1013342
536 555349 555624 276 + 76     5: 13 14 17 4 12   Chorismate mutase I (EC 5.4.99.5) locus|SAG0540, protein_id|NP_687569.1, gi|22536718, geneID|1013343
537 555617 556813 1197 + -8     1: 6   EriC-type fluoride/proton exchange protein locus|SAG0541, protein_id|NP_687570.1, gi|22536719, geneID|1013344
538 557266 557649 384 + 452         IS1381, transposase OrfA locus|SAG0542, protein_id|NP_687571.1, gi|22536720, geneID|1013345
539 557682 558071 390 + 32         Mobile element protein locus|SAG0543, protein_id|NP_687572.1, gi|22536721, geneID|1013346
540 558254 558601 348 + 182     4: 15 2 1 11   LSU ribosomal protein L19p gene_name|rplS, locus|SAG0544, protein_id|NP_687573.1, gi|22536722, geneID|1013347
rna.91 558712 558783 72 + 110         tRNA-Arg-CCT  
541 559905 558826 1080 - 42         Integrase locus|SAG0545, protein_id|NP_687574.1, gi|22536723, geneID|1013349
542 560092 559910 183 - 4         hypothetical protein  
543 560891 560334 558 - 241         hypothetical protein locus|SAG0547, protein_id|NP_687576.1, gi|22536725, geneID|1013351
544 561690 560893 798 - 1         Phage CI-like repressor locus|SAG0548, protein_id|NP_687577.1, gi|22536726, geneID|1013352
545 562051 562194 144 + 360         hypothetical protein locus|SAG0549, protein_id|NP_687578.1, gi|22536727, geneID|1013353
546 562415 562191 225 - -4         hypothetical protein locus|SAG0550, protein_id|NP_687579.1, gi|22536728, geneID|1013354
547 562474 562632 159 + 58         FIG01115240: hypothetical protein locus|SAG0551, protein_id|NP_687580.1, gi|22536729, geneID|1013355

Annotation History   /   View All Related Annotations Help on Annotations


  Subsystems in Which This Protein Plays a Role

This PEG is currently not present in any subsytem.

  Protein Sequence

>fig|208435.3.peg.538 IS1381, transposase OrfA
MNYEASKQLTDVRFKRLVGVQRTTFEEMLAVLKTAYQRKHAKGGRTPKLSLEDLLMATLQ
YMREYRTYEQIAADFGIHESNLIRRSQWVESTLIQSGFTISKTHLSAEDTVIVDATEVKI
NRPKKIN

MD5 = 3e7fc5fd678730e3187546a9ee40ed24


  DNA Sequence

>fig|208435.3.peg.538 IS1381, transposase OrfA
atgaattatgaagcaagcaaacaattaactgatgtacgatttaagcgccttgttggtgtt
cagcgcactacttttgaagagatgttagctgtgttaaaaacagcttatcaacgtaaacac
gcaaaaggtggccgaacccctaagttaagcttagaagatctcctcatggctactcttcaa
tacatgcgagaataccgcacttatgaacaaattgcggctgattttggcattcacgaaagc
aacttaatccgtcgaagtcaatgggttgaatcaactcttattcaaagtggttttacgatt
tcaaaaactcatcttagtgctgaggatacggtgattgtggatgcaacagaggtaaaaatc
aatcgtcctaaaaaaatcaactag


  DNA with Flanking Sequence

>fig|208435.3.peg.538 IS1381, transposase OrfA
tactccatatcacatgctcatacgatttatggtgctcaatctagatagttagtgatgagt
tttaaaagagtttatcagtttgtagaacggaatattccgttctcttttttattctcttaa
agtttataaaaatggagtttgtcaattttatgaatgcaaaaattatgtggctaatataat
ttcttcaaagaaattgattttatgattgtcattaaaatactgtaaaatccaattgaatgt
gtaggaacttaggttaggataatgtctacaagcatttaagtcgcgatggtgaaatgcatt
ataagataaaaagttgatgtggatttcaactttatgggaaagagttaagtgacacgaaag
ctaatatagaaaacgtagcttaaaaaatcaaatattaaatgaattaaactctcaaaaatc
agaaaaaagctaacctagaaacagtaaatcaaatttaaataatagacttcctgcgaaaca
aaatatggtacaatagttctatgaattatgaagcaagcaaacaattaactgatgtacgat
ttaagcgccttgttggtgttcagcgcactacttttgaagagatgttagctgtgttaaaaa
cagcttatcaacgtaaacacgcaaaaggtggccgaacccctaagttaagcttagaagatc
tcctcatggctactcttcaatacatgcgagaataccgcacttatgaacaaattgcggctg
attttggcattcacgaaagcaacttaatccgtcgaagtcaatgggttgaatcaactctta
ttcaaagtggttttacgatttcaaaaactcatcttagtgctgaggatacggtgattgtgg
atgcaacagaggtaaaaatcaatcgtcctaaaaaaatcaactagcgaattattctggtaa
aaagaaatgtcatgctatgaaggctcaggcgattgtcacaagccaagggagaattgtttc
tttggatattgcagtgaactattgccacgatatgaagttgttcaaaatgagtcgcagaaa
catcggacaagctgctaaaatcttggcagacagtggttatcaagggatcatgaagatgta
ttcacaagcgcaaactccgaggaaatcaagcaaacttaagccactaactcttgaagataa
aacctataaccatacgctatccaaagagagaatcaaggttgagaatatttttgccaaagt
aaaaacgtttaaaatattttcaacaacctatcgaaatcgacgcaaacggtttggattacg
aatgaatttgattgctggaatgatcaaccgtgaactaggattttagtttcgcaggaagtc
taatatacaaataactattctaaaggatgacaccttgttcttctagataaaatagcttta
caag


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  Functional Coupling

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  Attributes

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  Protein Families

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