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SEED version cvs.1555556707 (3/17/2019 22:5:7) on gum.mcs.anl.gov
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Protein fig|208435.3.peg.535: Streptococcus agalactiae 2603V/R

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NCBI Taxonomy Id: 208435

Current Assignment: Flavodoxin
Translate Function Assignments


Context on contig NC_004116 from base 549006 to 560092 (11087 bp)

Fid Start End Size
(nt)		   Gap Find
best
clusters		 Pins Fc-sc SS Ev Function Aliases
530 549006 550403 1398 +           Dipeptidase locus|SAG0534, protein_id|NP_687563.1, gi|22536712, geneID|1013337
531 550545 552065 1521 + 141         Candidate zinc-binding lipoprotein ZinT locus|SAG0535, protein_id|NP_687564.1, gi|22536713, geneID|1013338
532 552438 552178 261 - 112     3: 2 1 3   LSU ribosomal protein L31p @ LSU ribosomal protein L31p, zinc-independent gene_name|rpmE2, locus|SAG0536, protein_id|NP_687565.1, gi|22536714, geneID|1013339
533 553482 552547 936 - 108     2: 7 5   3'-to-5' oligoribonuclease A, Bacillus type locus|SAG0537, protein_id|NP_687566.1, gi|22536715, geneID|1013340
534 553748 554770 1023 + 265     3: 10 8 9   Adenosine deaminase (EC 3.5.4.4) locus|SAG0538, protein_id|NP_687567.1, gi|22536716, geneID|1013341
535 554829 555272 444 + 58     1: 16   Flavodoxin locus|SAG0539, protein_id|NP_687568.1, gi|22536717, geneID|1013342
536 555349 555624 276 + 76     5: 13 14 17 4 12   Chorismate mutase I (EC 5.4.99.5) locus|SAG0540, protein_id|NP_687569.1, gi|22536718, geneID|1013343
537 555617 556813 1197 + -8     1: 6   EriC-type fluoride/proton exchange protein locus|SAG0541, protein_id|NP_687570.1, gi|22536719, geneID|1013344
538 557266 557649 384 + 452         IS1381, transposase OrfA locus|SAG0542, protein_id|NP_687571.1, gi|22536720, geneID|1013345
539 557682 558071 390 + 32         Mobile element protein locus|SAG0543, protein_id|NP_687572.1, gi|22536721, geneID|1013346
540 558254 558601 348 + 182     4: 15 2 1 11   LSU ribosomal protein L19p gene_name|rplS, locus|SAG0544, protein_id|NP_687573.1, gi|22536722, geneID|1013347
rna.91 558712 558783 72 + 110         tRNA-Arg-CCT  
541 559905 558826 1080 - 42         Integrase locus|SAG0545, protein_id|NP_687574.1, gi|22536723, geneID|1013349
542 560092 559910 183 - 4         hypothetical protein  

Annotation History   /   View All Related Annotations Help on Annotations


  Subsystems in Which This Protein Plays a Role

Subsystem Curator Role
Flavodoxin gjo Flavodoxin


  Protein Sequence

>fig|208435.3.peg.535 Flavodoxin
MALAKIVYASMTGNTEEIADIVADKLRDLGLDVEVEECTMVDAADFEDADIAIVATYTYG
DGDLPDEIVDFYEDLAEVDLSGKVYGVVGSGDTFYDYFCKSVDEFEAQFALTGAQKGADC
VKVDLAAEDEDIENLEAFAEEIASKLN

MD5 = 3db1610cd865afd885a89eba59282bf1


  DNA Sequence

>fig|208435.3.peg.535 Flavodoxin
atggctttagcaaagattgtttatgctagcatgaccggaaatactgaagaaattgctgac
attgttgctgataaattacgtgacttgggtctagatgttgaagtagaagagtgtacgatg
gttgatgctgcagattttgaagatgctgacattgcaattgttgccacttatacatatggt
gatggagatttaccagatgaaatcgtggacttttatgaagatttagcagaggttgattta
tctggtaaagtttacggcgtagtgggttcaggtgatactttctatgattacttctgcaaa
tctgttgatgagttcgaggctcaattcgcattaacaggagcacaaaaaggtgctgattgt
gttaaagttgatttagcggcagaagacgaagacattgaaaacttagaagcttttgctgaa
gaaattgcttctaaacttaactaa


  DNA with Flanking Sequence

>fig|208435.3.peg.535 Flavodoxin
cccgatgactttacatgcaggtgagtgtggttgtgctaagcatattgcggatagtttaaa
tttagggattaagcgtatgggacatgtgacagctttaacaggacagagggatttaataaa
gcgatttgtcgaagaagatgctgtagcagagatgtgtttaactagcaatttacaaacaaa
agcagcctcaagtattcaaagttttccttatcaagaactttatgatgctggaggtaagat
tacaattaatacagataatcgtactgtttccgatacaaatttgacgaaagaatatagtct
tttcgtaacttattttggaacgaaaatagaagactttcttgttttcaatcaaaacgctgt
gaaggcctcctttacaagtgattcagagaaagatactttactacataagctacaagaaaa
ctatgacagctatctaaaataaccttcacgattctttaaaaatatgatagaatagtggta
atttacaagtggaggaagatatggctttagcaaagattgtttatgctagcatgaccggaa
atactgaagaaattgctgacattgttgctgataaattacgtgacttgggtctagatgttg
aagtagaagagtgtacgatggttgatgctgcagattttgaagatgctgacattgcaattg
ttgccacttatacatatggtgatggagatttaccagatgaaatcgtggacttttatgaag
atttagcagaggttgatttatctggtaaagtttacggcgtagtgggttcaggtgatactt
tctatgattacttctgcaaatctgttgatgagttcgaggctcaattcgcattaacaggag
cacaaaaaggtgctgattgtgttaaagttgatttagcggcagaagacgaagacattgaaa
acttagaagcttttgctgaagaaattgcttctaaacttaactaagctaccaaaaagacga
acacgagtcgtctttttaacttttttaccatcttttgtaactagaatatgagatatagat
atggaattagaagagattcgtcaagaaatagatgaaatagatcagcaattagtaagcctt
ttagaaactagaatgggtctaattttagaggtcatagcatttaaaaagaaacatcgactt
ccagttttagataataatcgtgaaaacgaagtgcttaacaatgtattgaagaaagtccaa
aaccatcaatttgacgatgtgatacgagcaactttcaaagacattatgacagaatctcgt
gtttatcaaaaggagaatattgtagacggtgattaaacgatttgataattatgctcagta
cgtacttgttttaggttttagcttactaattggtggtgtggttggggctattacagcagt
ctttggacgtgttctattattcctgacagcctttagaagtgattatatagcttacctact
ccct


  Assignments for Essentially Identical Proteins

Id Organism Who ASSIGN Assignment
GO:0005506       F:iron ion binding
GO:0009055       F:electron carrier activity
GO:0010181       F:FMN binding
GO:0016491       F:oxidoreductase activity
cmr|NT04SA0692 Streptococcus agalactiae NEM316     flavodoxin
cmr|SAG_0539 Streptococcus agalactiae 2603V/R     flavodoxin
cmr|SAJ_0657 Streptococcus agalactiae 18RS21     flavodoxin
cmr|SAK_0689 Streptococcus agalactiae A909     flavodoxin
cmr|SAM_0564 Streptococcus agalactiae CJB111     flavodoxin
cmr|SAN_0646 Streptococcus agalactiae COH1     flavodoxin
emb|CAD46228.1 Streptococcus agalactiae NEM316 EMBL   Unknown
fig|205921.3.peg.750 Streptococcus agalactiae A909 FIG   Flavodoxin
fig|205921.4.peg.619 Streptococcus agalactiae A909 FIG   Flavodoxin
fig|208435.1.peg.532 Streptococcus agalactiae 2603V/R FIG   Flavodoxin
fig|211110.1.peg.578 Streptococcus agalactiae NEM316 FIG   Flavodoxin
fig|211110.3.peg.600 Streptococcus agalactiae NEM316 FIG   Flavodoxin
fig|342613.5.peg.748 Streptococcus agalactiae 18RS21 FIG   Flavodoxin
fig|342616.4.peg.829 Streptococcus agalactiae COH1 FIG   Flavodoxin
fig|342617.4.peg.1094 Streptococcus agalactiae CJB111 FIG   Flavodoxin
gb|AAM99440.1 Streptococcus agalactiae 2603V/R     flavodoxin
gb|ABA44674.1 Streptococcus agalactiae A909     flavodoxin
gb|AE014216_16 Streptococcus agalactiae 2603V/R     flavodoxin
gb|EAO62775.1 Streptococcus agalactiae 18RS21     flavodoxin
gb|EAO73329.1 Streptococcus agalactiae CJB111     flavodoxin
gb|EAO76009.1 Streptococcus agalactiae COH1     flavodoxin
gi|22533559 Streptococcus agalactiae 2603V/R NCBI   flavodoxin
gi|22536717 Streptococcus agalactiae 2603V/R NCBI   flavodoxin
gi|23095007 Streptococcus agalactiae NEM316 NCBI   Unknown
gi|25010653 Streptococcus agalactiae NEM316 NCBI   flavodoxin
gi|76562090 Streptococcus agalactiae A909 NCBI   flavodoxin
gi|76586259 Streptococcus agalactiae 18RS21 NCBI   flavodoxin
gi|76787033 Streptococcus agalactiae A909 NCBI   flavodoxin
gi|76798387 Streptococcus agalactiae 18RS21 NCBI   flavodoxin
gi|77162360 Streptococcus agalactiae CJB111 NCBI   flavodoxin
gi|77172877 Streptococcus agalactiae COH1 NCBI   flavodoxin
gi|77408520 Streptococcus agalactiae COH1 NCBI   flavodoxin
gi|77411575 Streptococcus agalactiae CJB111 NCBI   flavodoxin
img|637315740 Streptococcus agalactiae 2603V/R IMG   flavodoxin
img|637349318 Streptococcus agalactiae NEM316 IMG   flavodoxin
img|637725042 Streptococcus agalactiae A909 IMG   flavodoxin
img|638643777 Streptococcus agalactiae 18RS21 IMG   flavodoxin
img|638648835 Streptococcus agalactiae CJB111 IMG   flavodoxin
img|638650748 Streptococcus agalactiae COH1 IMG   flavodoxin
kegg|sag:SAG0539 Streptococcus agalactiae 2603 (serotype V) KEGG   flavodoxin
kegg|sak:SAK_0689 Streptococcus agalactiae A909 (serotype Ia) KEGG   flavodoxin
kegg|san:gbs0584 Streptococcus agalactiae NEM316 (serotype III) KEGG   flavodoxin
ref|NP_687568.1 Streptococcus agalactiae 2603V/R RefSeq   flavodoxin
ref|NP_735048.1 Streptococcus agalactiae NEM316 RefSeq   flavodoxin
ref|YP_329320.1 Streptococcus agalactiae A909 RefSeq   flavodoxin
ref|ZP_00780629.1 Streptococcus agalactiae 18RS21 RefSeq   flavodoxin
ref|ZP_00785257.1 Streptococcus agalactiae COH1 RefSeq   flavodoxin
ref|ZP_00787917.1 Streptococcus agalactiae CJB111 RefSeq   flavodoxin
tr|Q3D946 Streptococcus agalactiae COH1 TrEMBL   Flavodoxin
tr|Q3DEK9 Streptococcus agalactiae CJB111 TrEMBL   Flavodoxin
tr|Q3DTB1 Streptococcus agalactiae 18RS21 TrEMBL   Flavodoxin
tr|Q3K2D3 Streptococcus agalactiae serotype Ia TrEMBL   Flavodoxin
tr|Q8E124 Streptococcus agalactiae serotype V TrEMBL   Flavodoxin
tr|Q8E6H9 Streptococcus agalactiae serotype III TrEMBL   Putative uncharacterized protein gbs0584


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