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SEED version cvs.1555556707 (3/17/2019 22:5:7) on gum.mcs.anl.gov
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Protein fig|208435.3.peg.535: Streptococcus agalactiae 2603V/R

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NCBI Taxonomy Id: 208435

Current Assignment: Flavodoxin
Translate Function Assignments


Context on contig NC_004116 from base 549006 to 560092 (11087 bp)

Fid Start End Size
(nt)		   Gap Find
best
clusters		 Pins Fc-sc SS Ev Function Aliases
530 549006 550403 1398 +           Dipeptidase locus|SAG0534, protein_id|NP_687563.1, gi|22536712, geneID|1013337
531 550545 552065 1521 + 141         Candidate zinc-binding lipoprotein ZinT locus|SAG0535, protein_id|NP_687564.1, gi|22536713, geneID|1013338
532 552438 552178 261 - 112     3: 2 1 3   LSU ribosomal protein L31p @ LSU ribosomal protein L31p, zinc-independent gene_name|rpmE2, locus|SAG0536, protein_id|NP_687565.1, gi|22536714, geneID|1013339
533 553482 552547 936 - 108     2: 7 5   3'-to-5' oligoribonuclease A, Bacillus type locus|SAG0537, protein_id|NP_687566.1, gi|22536715, geneID|1013340
534 553748 554770 1023 + 265     3: 10 8 9   Adenosine deaminase (EC 3.5.4.4) locus|SAG0538, protein_id|NP_687567.1, gi|22536716, geneID|1013341
535 554829 555272 444 + 58     1: 16   Flavodoxin locus|SAG0539, protein_id|NP_687568.1, gi|22536717, geneID|1013342
536 555349 555624 276 + 76     5: 13 14 17 4 12   Chorismate mutase I (EC 5.4.99.5) locus|SAG0540, protein_id|NP_687569.1, gi|22536718, geneID|1013343
537 555617 556813 1197 + -8     1: 6   EriC-type fluoride/proton exchange protein locus|SAG0541, protein_id|NP_687570.1, gi|22536719, geneID|1013344
538 557266 557649 384 + 452         IS1381, transposase OrfA locus|SAG0542, protein_id|NP_687571.1, gi|22536720, geneID|1013345
539 557682 558071 390 + 32         Mobile element protein locus|SAG0543, protein_id|NP_687572.1, gi|22536721, geneID|1013346
540 558254 558601 348 + 182     4: 15 2 1 11   LSU ribosomal protein L19p gene_name|rplS, locus|SAG0544, protein_id|NP_687573.1, gi|22536722, geneID|1013347
rna.91 558712 558783 72 + 110         tRNA-Arg-CCT  
541 559905 558826 1080 - 42         Integrase locus|SAG0545, protein_id|NP_687574.1, gi|22536723, geneID|1013349
542 560092 559910 183 - 4         hypothetical protein  

Annotation History   /   View All Related Annotations Help on Annotations


  Subsystems in Which This Protein Plays a Role

Subsystem Curator Role
Flavodoxin gjo Flavodoxin


  Protein Sequence

>fig|208435.3.peg.535 Flavodoxin
MALAKIVYASMTGNTEEIADIVADKLRDLGLDVEVEECTMVDAADFEDADIAIVATYTYG
DGDLPDEIVDFYEDLAEVDLSGKVYGVVGSGDTFYDYFCKSVDEFEAQFALTGAQKGADC
VKVDLAAEDEDIENLEAFAEEIASKLN

MD5 = 3db1610cd865afd885a89eba59282bf1


  DNA Sequence

>fig|208435.3.peg.535 Flavodoxin
atggctttagcaaagattgtttatgctagcatgaccggaaatactgaagaaattgctgac
attgttgctgataaattacgtgacttgggtctagatgttgaagtagaagagtgtacgatg
gttgatgctgcagattttgaagatgctgacattgcaattgttgccacttatacatatggt
gatggagatttaccagatgaaatcgtggacttttatgaagatttagcagaggttgattta
tctggtaaagtttacggcgtagtgggttcaggtgatactttctatgattacttctgcaaa
tctgttgatgagttcgaggctcaattcgcattaacaggagcacaaaaaggtgctgattgt
gttaaagttgatttagcggcagaagacgaagacattgaaaacttagaagcttttgctgaa
gaaattgcttctaaacttaactaa


  DNA with Flanking Sequence

>fig|208435.3.peg.535 Flavodoxin
cccgatgactttacatgcaggtgagtgtggttgtgctaagcatattgcggatagtttaaa
tttagggattaagcgtatgggacatgtgacagctttaacaggacagagggatttaataaa
gcgatttgtcgaagaagatgctgtagcagagatgtgtttaactagcaatttacaaacaaa
agcagcctcaagtattcaaagttttccttatcaagaactttatgatgctggaggtaagat
tacaattaatacagataatcgtactgtttccgatacaaatttgacgaaagaatatagtct
tttcgtaacttattttggaacgaaaatagaagactttcttgttttcaatcaaaacgctgt
gaaggcctcctttacaagtgattcagagaaagatactttactacataagctacaagaaaa
ctatgacagctatctaaaataaccttcacgattctttaaaaatatgatagaatagtggta
atttacaagtggaggaagatatggctttagcaaagattgtttatgctagcatgaccggaa
atactgaagaaattgctgacattgttgctgataaattacgtgacttgggtctagatgttg
aagtagaagagtgtacgatggttgatgctgcagattttgaagatgctgacattgcaattg
ttgccacttatacatatggtgatggagatttaccagatgaaatcgtggacttttatgaag
atttagcagaggttgatttatctggtaaagtttacggcgtagtgggttcaggtgatactt
tctatgattacttctgcaaatctgttgatgagttcgaggctcaattcgcattaacaggag
cacaaaaaggtgctgattgtgttaaagttgatttagcggcagaagacgaagacattgaaa
acttagaagcttttgctgaagaaattgcttctaaacttaactaagctaccaaaaagacga
acacgagtcgtctttttaacttttttaccatcttttgtaactagaatatgagatatagat
atggaattagaagagattcgtcaagaaatagatgaaatagatcagcaattagtaagcctt
ttagaaactagaatgggtctaattttagaggtcatagcatttaaaaagaaacatcgactt
ccagttttagataataatcgtgaaaacgaagtgcttaacaatgtattgaagaaagtccaa
aaccatcaatttgacgatgtgatacgagcaactttcaaagacattatgacagaatctcgt
gtttatcaaaaggagaatattgtagacggtgattaaacgatttgataattatgctcagta
cgtacttgttttaggttttagcttactaattggtggtgtggttggggctattacagcagt
ctttggacgtgttctattattcctgacagcctttagaagtgattatatagcttacctact
ccct


  Assignments for Essentially Identical Proteins

No essentially identical proteins found

  Links to Related Entries in Other Sites

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  Functional Coupling

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  Attributes

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  Protein Families

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