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SEED version cvs.1555556707 (3/17/2019 22:5:7) on gum.mcs.anl.gov
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Protein fig|208435.3.peg.533: Streptococcus agalactiae 2603V/R

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NCBI Taxonomy Id: 208435

Current Assignment: 3'-to-5' oligoribonuclease A, Bacillus type
Translate Function Assignments


Context on contig NC_004116 from base 547109 to 558601 (11493 bp)

Fid Start End Size
(nt)		   Gap Find
best
clusters		 Pins Fc-sc SS Ev Function Aliases
528 547109 548083 975 +       1: 3   FIG002813: LPPG:FO 2-phospho-L-lactate transferase like, CofD-like locus|SAG0532, protein_id|NP_687561.1, gi|22536710, geneID|1013335
529 548080 548991 912 + -4     1: 3   Sporulation transcription regulator WhiA locus|SAG0533, protein_id|NP_687562.1, gi|22536711, geneID|1013336
530 549006 550403 1398 + 14         Dipeptidase locus|SAG0534, protein_id|NP_687563.1, gi|22536712, geneID|1013337
531 550545 552065 1521 + 141         Candidate zinc-binding lipoprotein ZinT locus|SAG0535, protein_id|NP_687564.1, gi|22536713, geneID|1013338
532 552438 552178 261 - 112     3: 2 1 12   LSU ribosomal protein L31p @ LSU ribosomal protein L31p, zinc-independent gene_name|rpmE2, locus|SAG0536, protein_id|NP_687565.1, gi|22536714, geneID|1013339
533 553482 552547 936 - 108     2: 15 4   3'-to-5' oligoribonuclease A, Bacillus type locus|SAG0537, protein_id|NP_687566.1, gi|22536715, geneID|1013340
534 553748 554770 1023 + 265     3: 17 5 16   Adenosine deaminase (EC 3.5.4.4) locus|SAG0538, protein_id|NP_687567.1, gi|22536716, geneID|1013341
535 554829 555272 444 + 58     1: 10   Flavodoxin locus|SAG0539, protein_id|NP_687568.1, gi|22536717, geneID|1013342
536 555349 555624 276 + 76     5: 8 9 11 13 7   Chorismate mutase I (EC 5.4.99.5) locus|SAG0540, protein_id|NP_687569.1, gi|22536718, geneID|1013343
537 555617 556813 1197 + -8     1: 14   EriC-type fluoride/proton exchange protein locus|SAG0541, protein_id|NP_687570.1, gi|22536719, geneID|1013344
538 557266 557649 384 + 452         IS1381, transposase OrfA locus|SAG0542, protein_id|NP_687571.1, gi|22536720, geneID|1013345
539 557682 558071 390 + 32         Mobile element protein locus|SAG0543, protein_id|NP_687572.1, gi|22536721, geneID|1013346
540 558254 558601 348 + 182     4: 18 2 1 6   LSU ribosomal protein L19p gene_name|rplS, locus|SAG0544, protein_id|NP_687573.1, gi|22536722, geneID|1013347

Annotation History   /   View All Related Annotations Help on Annotations


  Subsystems in Which This Protein Plays a Role

Subsystem Curator Role
RNA_processing_and_degradation,_bacterial gjo FIG146085: 3'-to-5' oligoribonuclease A, Bacillus type
CBSS-138119.3.peg.2719 OlgaV FIG146085: 3'-to-5' oligoribonuclease A, Bacillus type


  Protein Sequence

>fig|208435.3.peg.533 3'-to-5' oligoribonuclease A, Bacillus type
MIIFQQILDKIKEYDTIIIHRHMRPDPDALGSQIGLRDIIRHNFPKKKVLATGFDEPTLA
WIAKMDQVTDQDYQGALVVVTDTANTPRIDDERYKKGDFLIKIDHHPNDEVYGDLSYVDT
NASSASEIVTDFALSCDLLLSTSAARVLYNGIVGDTGRFLYPATTSKTLKIASKLREFDF
DFSAMARQMDSFPFKIAKLQGFIFEQLKIDKNGAACVTLTQEDLKRFDVTDAETAAIVGV
PGKIDIVESWAIFVEQSDGHYRVRLRSKSHIINEIAKRHNGGGHPLASGANSYSLEENQA
IYQEIQEILSL

MD5 = 1c9190e51d4802fd2922d1f23ba44c0b


  DNA Sequence

>fig|208435.3.peg.533 3'-to-5' oligoribonuclease A, Bacillus type
atgattatttttcaacaaattcttgataaaatcaaagagtacgacaccatcattatccat
cgacatatgagaccagaccctgatgctcttggtagccaaatcggcttaagggatatcatc
aggcataattttccaaagaaaaaagtacttgctactggttttgacgaacccactctcgct
tggattgctaaaatggatcaagtgaccgaccaagactatcaaggcgctcttgttgttgtt
acagatacagcaaataccccacgcattgatgatgaacgttataaaaaaggtgacttttta
attaaaattgaccatcatccaaacgatgaagtctatggagatctctcttatgtagatact
aacgcctctagtgcaagtgaaattgtgacagactttgctctttcttgtgatttgttgtta
tcaacaagtgcagcaagagttctatataatggtattgtaggagatacaggacgcttttta
tatcctgctaccacaagtaaaacactgaagattgctagcaaacttcgtgaatttgacttt
gatttttctgcaatggcacgtcaaatggattcctttcctttcaaaattgcaaaattacaa
ggctttatttttgagcaacttaaaattgacaagaacggcgctgcatgcgttactttaaca
caagaagacctaaaacgcttcgatgtaacagatgcagagactgctgcaatcgttggtgta
cctggaaaaattgatattgtagaaagttgggcaattttcgttgaacaaagcgatgggcat
tatcgtgtgcgcctacgtagtaagtcacacatcattaatgaaatagctaaacgtcataat
ggtggcggacatcctttagccagcggagctaattcttatagtttggaagagaatcaagct
atttaccaagaaatccaggaaatactttctttataa


  DNA with Flanking Sequence

>fig|208435.3.peg.533 3'-to-5' oligoribonuclease A, Bacillus type
gtaatgcttccttcgtttgaagaagcggtctgataaactcaaacgttttaaggtaatcta
ccaagctttctgtttgagctggagctataacatattttcttaattctttatcactactcg
gcagtattatatcagccatattagccaattttctaatagctggtaaagaaagtgagccat
ctagatgacaatgcaactccgccttagccaattcttttaatactgcttgtgtcataattt
atctcctattaaaaagcatttttactatattaacaaaagttagctaaaaagcaatacatt
tacaaaatattattataaaaaagattattagttagcagtatccgaattttataaaaaaat
aacataccatcatataaaaataaacaaacattgtgaccgctatcttaatttctttcctca
ataaaagatttaagctataatatagtcaacaatatagccttgttcttcactaaaagacaa
aacagttaggtaggtaaaaaatgattatttttcaacaaattcttgataaaatcaaagagt
acgacaccatcattatccatcgacatatgagaccagaccctgatgctcttggtagccaaa
tcggcttaagggatatcatcaggcataattttccaaagaaaaaagtacttgctactggtt
ttgacgaacccactctcgcttggattgctaaaatggatcaagtgaccgaccaagactatc
aaggcgctcttgttgttgttacagatacagcaaataccccacgcattgatgatgaacgtt
ataaaaaaggtgactttttaattaaaattgaccatcatccaaacgatgaagtctatggag
atctctcttatgtagatactaacgcctctagtgcaagtgaaattgtgacagactttgctc
tttcttgtgatttgttgttatcaacaagtgcagcaagagttctatataatggtattgtag
gagatacaggacgctttttatatcctgctaccacaagtaaaacactgaagattgctagca
aacttcgtgaatttgactttgatttttctgcaatggcacgtcaaatggattcctttcctt
tcaaaattgcaaaattacaaggctttatttttgagcaacttaaaattgacaagaacggcg
ctgcatgcgttactttaacacaagaagacctaaaacgcttcgatgtaacagatgcagaga
ctgctgcaatcgttggtgtacctggaaaaattgatattgtagaaagttgggcaattttcg
ttgaacaaagcgatgggcattatcgtgtgcgcctacgtagtaagtcacacatcattaatg
aaatagctaaacgtcataatggtggcggacatcctttagccagcggagctaattcttata
gtttggaagagaatcaagctatttaccaagaaatccaggaaatactttctttataatttt
actttttttatcaaaacacttgtcaagactattcttatttgatagaatagagtggttaat
aactatgactcagacgagttatggcagaaaggaaatttttaaagatgaaaaaagacatcc
atccagattatcgtccagttgttttcttagatacaactacaggttacaaattccttagtg
gttcaactaaatcaactaaagaaacagtagaattcgaaggtgaaacttacccacttattc
gtgtggaaatctcatcagattcacatccattctatacaggacgtcaaaaattcactcaag
cagatggacgtgtggaccgtttcaacaaaaaatatggtctcaaagacgcaaacgctgctc
aataagcatagcattaattttaaaagcacttctattagaagtgcttttttctatgtttga
gcctatcacgtacaaagaaaaaaagatgatatcgtatccgatatcatcttttaaatatta
atgagacataaggtct


  Assignments for Essentially Identical Proteins

Id Organism Who ASSIGN Assignment
GO:0003676       F:nucleic acid binding
GO:0016787       F:hydrolase activity
GO:0030145       F:manganese ion binding
cmr|NT04SA0690 Streptococcus agalactiae NEM316     DHH subfamily 1 protein
cmr|SAG_0537 Streptococcus agalactiae 2603V/R     DHH family protein
cmr|SAI_0660 Streptococcus agalactiae H36B     DHH family protein
cmr|SAK_0687 Streptococcus agalactiae A909     DHH family protein
cmr|SAM_0562 Streptococcus agalactiae CJB111     DHH family protein
emb|CAD46226.1 Streptococcus agalactiae NEM316 EMBL   Unknown
fig|205921.3.peg.749 Streptococcus agalactiae A909 FIG   3'-to-5' oligoribonuclease A, Bacillus type
fig|205921.4.peg.617 Streptococcus agalactiae A909 FIG   3'-to-5' oligoribonuclease A, Bacillus type
fig|208435.1.peg.530 Streptococcus agalactiae 2603V/R FIG   3'-to-5' oligoribonuclease A, Bacillus type
fig|211110.1.peg.576 Streptococcus agalactiae NEM316 FIG   3'-to-5' oligoribonuclease A, Bacillus type
fig|211110.3.peg.598 Streptococcus agalactiae NEM316 FIG   3'-to-5' oligoribonuclease A, Bacillus type
fig|342615.4.peg.520 Streptococcus agalactiae H36B FIG   3'-to-5' oligoribonuclease A, Bacillus type
fig|342617.4.peg.1096 Streptococcus agalactiae CJB111 FIG   3'-to-5' oligoribonuclease A, Bacillus type
gb|AAM99438.1 Streptococcus agalactiae 2603V/R     DHH family protein
gb|ABA44971.1 Streptococcus agalactiae A909     DHH family protein
gb|AE014216_14 Streptococcus agalactiae 2603V/R     DHH family protein
gb|EAO73339.1 Streptococcus agalactiae CJB111     DHH family protein
gb|EAO78736.1 Streptococcus agalactiae H36B     DHH family protein
gi|22533557 Streptococcus agalactiae 2603V/R NCBI   DHH family protein
gi|22536715 Streptococcus agalactiae 2603V/R NCBI   DHH family protein
gi|23095005 Streptococcus agalactiae NEM316 NCBI   Unknown
gi|25010651 Streptococcus agalactiae NEM316 NCBI   DHH family protein
gi|76562387 Streptococcus agalactiae A909 NCBI   DHH family protein
gi|76787330 Streptococcus agalactiae A909 NCBI   DHH family protein
gi|77162370 Streptococcus agalactiae CJB111 NCBI   DHH family protein
gi|77175960 Streptococcus agalactiae H36B NCBI   DHH family protein
gi|77405467 Streptococcus agalactiae H36B NCBI   DHH family protein
gi|77411585 Streptococcus agalactiae CJB111 NCBI   DHH family protein
img|637315738 Streptococcus agalactiae 2603V/R IMG   DHH family protein
img|637349316 Streptococcus agalactiae NEM316 IMG   hypothetical protein
img|637725040 Streptococcus agalactiae A909 IMG   DHH family protein
img|638648837 Streptococcus agalactiae CJB111 IMG   DHH family protein
img|638652815 Streptococcus agalactiae H36B IMG   DHH family protein
kegg|sag:SAG0537 Streptococcus agalactiae 2603 (serotype V) KEGG   DHH family protein
kegg|sak:SAK_0687 Streptococcus agalactiae A909 (serotype Ia) KEGG   DHH family protein
kegg|san:gbs0582 Streptococcus agalactiae NEM316 (serotype III) KEGG   DHH family protein
ref|NP_687566.1 Streptococcus agalactiae 2603V/R RefSeq   DHH family protein
ref|NP_735046.1 Streptococcus agalactiae NEM316 RefSeq   DHH family protein
ref|YP_329318.1 Streptococcus agalactiae A909 RefSeq   DHH family protein
ref|ZP_00782560.1 Streptococcus agalactiae H36B RefSeq   DHH family protein
ref|ZP_00787927.1 Streptococcus agalactiae CJB111 RefSeq   DHH family protein
tr|Q3D379 Streptococcus agalactiae H36B TrEMBL   DHH family protein
tr|Q3DEK7 Streptococcus agalactiae CJB111 TrEMBL   DHH family protein
tr|Q3K2D5 Streptococcus agalactiae serotype Ia TrEMBL   DHH family protein
tr|Q8E126 Streptococcus agalactiae serotype V TrEMBL   DHH family protein
tr|Q8E6I1 Streptococcus agalactiae serotype III TrEMBL   Putative uncharacterized protein gbs0582


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