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SEED version cvs.1555556707 (3/17/2019 22:5:7) on gum.mcs.anl.gov
 The SEED


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Protein fig|196164.6.peg.852: Corynebacterium efficiens YS-314

This feature in The SEED Viewer

NCBI Taxonomy Id: 196164

Current Assignment: hypothetical protein
Translate Function Assignments


Context on contig NC_004369 from base 880015 to 891662 (11648 bp)

Fid Start End Size
(nt)		   Gap Find
best
clusters		 Pins Fc-sc SS Ev Function Aliases
845 880015 880233 219 +           hypothetical protein locus|CE0827, protein_id|NP_737437.1, gi|25027383, geneID|1032933
846 880497 881018 522 + 263         hypothetical protein locus|CE0828, protein_id|NP_737438.1, gi|25027384, geneID|1032934
847 881146 881979 834 + 127         FIG00549605: hypothetical protein locus|CE0829, protein_id|NP_737439.1, gi|25027385, geneID|1032935
848 881988 882272 285 + 8         FIG00549153: hypothetical protein locus|CE0830, protein_id|NP_737440.1, gi|25027386, geneID|1032936
849 882313 882477 165 + 40         hypothetical protein  
850 882477 882776 300 + -1         hypothetical protein locus|CE0831, protein_id|NP_737441.1, gi|25027387, geneID|1032937
851 883684 884085 402 + 907         hypothetical protein locus|CE0834, protein_id|NP_737444.1, gi|25027390, geneID|1032940
852 885062 886327 1266 + 976         hypothetical protein locus|CE0837, protein_id|NP_737447.1, gi|25027393, geneID|1032943
853 887066 888274 1209 + 738         FIG00548751: hypothetical protein locus|CE0839, protein_id|NP_737449.1, gi|25027395, geneID|1032945
854 888811 890346 1536 + 536         phage terminase, large subunit, putative locus|CE0841, protein_id|NP_737451.1, gi|25027397, geneID|1032947
855 890502 891662 1161 + 155         FIG00547189: hypothetical protein locus|CE0842, protein_id|NP_737452.1, gi|25027398, geneID|1032948

Annotation History   /   View All Related Annotations Help on Annotations


  Subsystems in Which This Protein Plays a Role

This PEG is currently not present in any subsytem.

  Protein Sequence

>fig|196164.6.peg.852 hypothetical protein
MAWLRIGDNVATHPKMSLLLEACEFDHSLKNESFGLMVSLAAVSAAHLTDFMVGPGLVAQ
FAPGREKVLIDILVSAGLLERVKVDERWMYKLYNDEEFIHMRTKAEVEIDRARKRDSRRH
DLIIPVRVRDGDQCRWCGKTVSWEDRKSARAATIDSLTSHRESTVETLVVACNGCNSAGH
EGKERTPRPAPTPQEVYYSPKTIAWINNTDYAQENGIHLTDRQTRLDIPAAPAATTVKAA
AHSAAPGGGSAGMAADSPQESSAHVAAAPERCGAPTADHSTAAAYGAAPDRYRNQAAAGQ
DPWEDAPDWVTQPAEKVLGRATAPGGGSVGMAADSPQESSAHVAATPEGRGAPTADHPTA
AAPPGALPKGNDSVKPRPDLDQVGDRPGLSGSGRVGSDRAGQVSVSGSRRRRGRRGGKRK
S

MD5 = f7249b96914e52c84b8d2d5914c23a39


  DNA Sequence

>fig|196164.6.peg.852 hypothetical protein
atggcatggctgcgcatcggcgacaacgtcgccacgcacccgaagatgtctctcctcctc
gaggcatgcgaattcgaccactccctgaaaaatgaatcctttggactcatggtctccctc
gccgcggtctcagcagcccacctcaccgacttcatggtcggccccggcctcgtcgcacag
ttcgcgccgggcagagagaaggtgctgatcgatatcctcgtctccgccgggctcctggag
cgcgtcaaagtggacgagcggtggatgtacaagctgtataacgatgaagagttcatccac
atgcgcaccaaagcggaagtggaaatcgaccgggctcgcaagcgcgacagccgacgccac
gacctaatcattcccgtcagggtccgcgacggcgaccagtgccgctggtgcggcaagacg
gtgtcctgggaggaccggaaatctgctcgcgcggccaccattgacagcctcaccagtcac
cgcgagagtaccgtcgagaccctcgtcgtggcctgcaatggttgcaactcagccggccat
gaaggcaaggaacgcacaccccgcccagcacccacaccccaggaggtctactactcacca
aagacaatcgcgtggatcaacaacaccgactacgcgcaagaaaacggtattcacctaacc
gatcggcagactcgcctggacatcccagcagcgccggcagcaaccacggtcaaggcagca
gcacatagcgcagcgccgggaggtggatcagcaggtatggcagcagacagtcctcaggag
agcagcgcccatgtggcagcagcgcctgaacgatgtggagcgccgacagctgatcactcc
acggcagcagcatatggagcagcgccagaccgctatcgcaaccaggcagcagcgggacaa
gacccatgggaggacgccccggactgggtgacgcaaccggcagagaaggttctcggcagg
gcaaccgcgccaggaggtggatcagtaggtatggcagcagacagtcctcaggagagcagc
gcccatgtggcagcaacgcctgagggacgtggagcgccgacagctgatcaccccacggca
gcggcgccgccgggcgccctacccaaaggtaacgattcggtaaaacctagaccggatcta
gatcaggtgggtgacagacctggattgtccgggtcgggacgggtcgggtcggatagggca
ggacaggtgtcggtttctggttctcgccgtaggagaggccgtcgtggaggaaagcggaag
tcgtaa


  DNA with Flanking Sequence

>fig|196164.6.peg.852 hypothetical protein
cccctatcaaggaccttcgggagttctggagagacctacttcaacggttccagccagtgg
tcgaggcatggaaagaagcgatagaaaagttccgggagggactcgatgagatcgaagagg
ccctgaccacctatcaggaacgggagaaaaaacgtgcatatgaacacatgattaccccac
ctcttgaccacactcttgcacaggtcacccacaccagatccaagccaccccgcccgcacc
gcacctacaggagacgaacaccatgaccaagtatcaaggcacgggcagagtcgagaagat
cgactgggaagcgcctgcccgctacagcaatcctcatgcagttgctgccctcatcgcgat
accagctgcagagttcgccgggctggacataacccgtcccttcaccatcacccaagagga
tgaagaggacaccgacgatgactaaccacatgacaacccaccactagtaagtaacccaaa
ccagaggaaggagtacccacatggcatggctgcgcatcggcgacaacgtcgccacgcacc
cgaagatgtctctcctcctcgaggcatgcgaattcgaccactccctgaaaaatgaatcct
ttggactcatggtctccctcgccgcggtctcagcagcccacctcaccgacttcatggtcg
gccccggcctcgtcgcacagttcgcgccgggcagagagaaggtgctgatcgatatcctcg
tctccgccgggctcctggagcgcgtcaaagtggacgagcggtggatgtacaagctgtata
acgatgaagagttcatccacatgcgcaccaaagcggaagtggaaatcgaccgggctcgca
agcgcgacagccgacgccacgacctaatcattcccgtcagggtccgcgacggcgaccagt
gccgctggtgcggcaagacggtgtcctgggaggaccggaaatctgctcgcgcggccacca
ttgacagcctcaccagtcaccgcgagagtaccgtcgagaccctcgtcgtggcctgcaatg
gttgcaactcagccggccatgaaggcaaggaacgcacaccccgcccagcacccacacccc
aggaggtctactactcaccaaagacaatcgcgtggatcaacaacaccgactacgcgcaag
aaaacggtattcacctaaccgatcggcagactcgcctggacatcccagcagcgccggcag
caaccacggtcaaggcagcagcacatagcgcagcgccgggaggtggatcagcaggtatgg
cagcagacagtcctcaggagagcagcgcccatgtggcagcagcgcctgaacgatgtggag
cgccgacagctgatcactccacggcagcagcatatggagcagcgccagaccgctatcgca
accaggcagcagcgggacaagacccatgggaggacgccccggactgggtgacgcaaccgg
cagagaaggttctcggcagggcaaccgcgccaggaggtggatcagtaggtatggcagcag
acagtcctcaggagagcagcgcccatgtggcagcaacgcctgagggacgtggagcgccga
cagctgatcaccccacggcagcggcgccgccgggcgccctacccaaaggtaacgattcgg
taaaacctagaccggatctagatcaggtgggtgacagacctggattgtccgggtcgggac
gggtcgggtcggatagggcaggacaggtgtcggtttctggttctcgccgtaggagaggcc
gtcgtggaggaaagcggaagtcgtaatggatgatcagttgttgactatgtttagtcattc
tttgtttgacctggagagttattcccctttattggatgagctgctctttcctcgtcagcc
tgctgcaggtgagaatgcgggtaaggctgtggcggtgaaggggtcgaaggtgccgttgtc
gacgtcgattcttgatctgaagattgagtgtgaggtgttgttggcgcggtggtgttccac
ggtgtcgcagtttgctgatgtggggcaacctccgggtgatcgtgctattcatgtccgggc
ggcgtggttgcagcagcagctattcgtcattgatgagatgccgtggggtgagatgtgcgc
ggaggaggtcattgcgtcttcgaggttagttcgggatgtcgtggtggacccgcgggaatg
ggatgacccgaagccaattgagattggttcgtgtagagagatcgtgagttgggctcggca
cctgggggcgcaggtgtctaggtcaacagtgcagcggtggattgac


  Assignments for Essentially Identical Proteins

Id Organism Who ASSIGN Assignment
cmr|NT01CE0869 Corynebacterium efficiens YS-314     hypothetical protein
dbj|BAC17647.1 Corynebacterium efficiens YS-314     hypothetical protein
fig|196164.1.peg.837 Corynebacterium efficiens YS-314 FIG   hypothetical protein
gb|EEW50438.1 Corynebacterium efficiens YS-314     conserved hypothetical protein
gi|23492674 Corynebacterium efficiens YS-314 NCBI   hypothetical protein
gi|25027393 Corynebacterium efficiens YS-314 NCBI   hypothetical protein CE0837
gi|259165884 Corynebacterium efficiens YS-314 NCBI   conserved hypothetical protein
gi|259506464 Corynebacterium efficiens YS-314 NCBI   conserved hypothetical protein
img|637351699 Corynebacterium efficiens YS-314 IMG   hypothetical protein
kegg|cef:CE0837 Corynebacterium efficiens YS-314 KEGG   hypothetical protein
ref|NP_737447.1 Corynebacterium efficiens YS-314 RefSeq   hypothetical protein CE0837
ref|ZP_05749366.1 Corynebacterium efficiens YS-314 RefSeq   conserved hypothetical protein
tr|Q8FRC4 Corynebacterium efficiens TrEMBL   Putative uncharacterized protein


  Links to Related Entries in Other Sites

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  Functional Coupling

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  Attributes

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Key
Link Explains Key		 Value


  Protein Families

No protein families found

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