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SEED version cvs.1555556707 (3/17/2019 22:5:7) on gum.mcs.anl.gov
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Protein fig|196164.6.peg.845: Corynebacterium efficiens YS-314

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NCBI Taxonomy Id: 196164

Current Assignment: hypothetical protein
Translate Function Assignments



Context on contig NC_004369 from base 874987 to 886327 (11341 bp)

Fid Start End Size
(nt)
  Gap Find
best
clusters
Pins Fc-sc SS Ev Function Aliases
839 875622 874987 636 -           FIG00548736: hypothetical protein locus|CE0818, protein_id|NP_737428.1, gi|25027374, geneID|1032924
840 875953 875774 180 - 151         FIG00546693: hypothetical protein locus|CE0819, protein_id|NP_737429.1, gi|25027375, geneID|1032925
841 876093 876287 195 + 139         hypothetical protein  
842 876988 876839 150 - 551         hypothetical protein locus|CE0821, protein_id|NP_737431.1, gi|25027377, geneID|1032927
843 879243 879482 240 + 2254         hypothetical protein locus|CE0825, protein_id|NP_737435.1, gi|25027381, geneID|1032931
844 879697 879575 123 - 92         hypothetical protein  
845 880015 880233 219 + 317         hypothetical protein locus|CE0827, protein_id|NP_737437.1, gi|25027383, geneID|1032933
846 880497 881018 522 + 263         hypothetical protein locus|CE0828, protein_id|NP_737438.1, gi|25027384, geneID|1032934
847 881146 881979 834 + 127         FIG00549605: hypothetical protein locus|CE0829, protein_id|NP_737439.1, gi|25027385, geneID|1032935
848 881988 882272 285 + 8         FIG00549153: hypothetical protein locus|CE0830, protein_id|NP_737440.1, gi|25027386, geneID|1032936
849 882313 882477 165 + 40         hypothetical protein  
850 882477 882776 300 + -1         hypothetical protein locus|CE0831, protein_id|NP_737441.1, gi|25027387, geneID|1032937
851 883684 884085 402 + 907         hypothetical protein locus|CE0834, protein_id|NP_737444.1, gi|25027390, geneID|1032940
852 885062 886327 1266 + 976         hypothetical protein locus|CE0837, protein_id|NP_737447.1, gi|25027393, geneID|1032943

Annotation History   /   View All Related Annotations Help on Annotations



  Subsystems in Which This Protein Plays a Role

This PEG is currently not present in any subsytem.

  Protein Sequence

>fig|196164.6.peg.845 hypothetical protein
MTTPSRHLTTEEACDLLRVDASTLRRYAREGKFSRIRLSPRKVLYIRDEIEAYIDARTIH
AQPLAGKRRAGR

MD5 = 1b7b6b782d896d6fd17635f9222718a2


  DNA Sequence

>fig|196164.6.peg.845 hypothetical protein
atgaccaccccatcacgtcacctgacaaccgaagaggcctgtgacctcctgcgtgttgat
gcctccaccttgaggcggtacgcccgtgaggggaagttctcccggatccggcttagccct
cggaaggtgctctacatccgggatgagatcgaggcgtacatcgatgcccgcaccatccat
gcgcagcccctggcggggaagcggagggccggtcgatga


  DNA with Flanking Sequence

>fig|196164.6.peg.845 hypothetical protein
tgggcggtcgtcgaggagacaaccgcaagggtgatcgttggtcataggcggtataaggct
tcagtcaagttccttttcctcggggaagtagatgtcattgctatagacctctacaaaccg
gtaacccttccggtttccgctgtggaagaaattaacgaactcgtcgtactcatcgtccgt
catgtgcttcgagatctcggggtgtcgaggggtggggactatgaacctcacgtcagagtc
aagctcaacccagattcgaggcgctccctcaacgacaagaataaacggtactccgtcctc
ctggagctggttccagcatccgtagatgaaggtgtaagcccagttgtacatctcgcgctg
gtgtccgttgacttcaagaatccacgattcatgcatgtccagaggatacgacgcaggctt
ctcaagcgcaggctaatacgaaaagaccgagcaaataagaggaatgcagtccacgagccg
ggccagatgaaggatatgccatgaccaccccatcacgtcacctgacaaccgaagaggcct
gtgacctcctgcgtgttgatgcctccaccttgaggcggtacgcccgtgaggggaagttct
cccggatccggcttagccctcggaaggtgctctacatccgggatgagatcgaggcgtaca
tcgatgcccgcaccatccatgcgcagcccctggcggggaagcggagggccggtcgatgat
cactctgctcaatttccatgatcaccaggttcgtgtggtccaggtcgctggcgagccaca
gtgggtggctgctgatattgctgccgtcctggggctgggtaggacgcatgacatggttcg
ctctcttgatgaggacgaaaggggtgcggttactatccgcaccccttccggggagcaaga
gatgactgtcattactgagtctggtctttattcttgcatcctcaggtctaggaagccgga
ggcgaaggagttcaagcggtgggtgacccgggaggtgttgccgtcgattaggcgtcacgg
tgggtatctcacggatccgaagatcgaggagatcctcaccgacccggacaccatcatcaa
gctggccaccgacctgaagcaggaacgagcccgtcgactggagctggaacagccggccag
gtcgtgggagcagctggcggatgctgctggtgattactccgtggccaccgcggcgaaagt
gttgtccagggacccctcc


  Assignments for Essentially Identical Proteins

Id Organism Who ASSIGN Assignment
GO:0000166       F:nucleotide binding
GO:0003700       F:transcription factor activity
GO:0006355       P:regulation of transcription, DNA-dependent
cmr|NT01CE0859 Corynebacterium efficiens YS-314     DNA binding domain, excisionase family protein
dbj|BAC17637.1 Corynebacterium efficiens YS-314     hypothetical protein
fig|196164.1.peg.827 Corynebacterium efficiens YS-314 FIG   hypothetical protein
gb|EEW50450.1 Corynebacterium efficiens YS-314     conserved hypothetical protein
gi|23492664 Corynebacterium efficiens YS-314 NCBI   hypothetical protein
gi|25027383 Corynebacterium efficiens YS-314 NCBI   hypothetical protein CE0827
gi|259165896 Corynebacterium efficiens YS-314 NCBI   conserved hypothetical protein
gi|259506476 Corynebacterium efficiens YS-314 NCBI   conserved hypothetical protein
img|637351689 Corynebacterium efficiens YS-314 IMG   hypothetical protein
kegg|cef:CE0827 Corynebacterium efficiens YS-314 KEGG   hypothetical protein
ref|NP_737437.1 Corynebacterium efficiens YS-314 RefSeq   hypothetical protein CE0827
ref|ZP_05749378.1 Corynebacterium efficiens YS-314 RefSeq   conserved hypothetical protein
tr|Q8FRD4 Corynebacterium efficiens TrEMBL   Putative uncharacterized protein


  Links to Related Entries in Other Sites

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  Attributes

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  Protein Families

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