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SEED version cvs.1555556707 (3/17/2019 22:5:7) on gum.mcs.anl.gov
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Protein fig|196164.6.peg.842: Corynebacterium efficiens YS-314

This feature in The SEED Viewer

NCBI Taxonomy Id: 196164

Current Assignment: hypothetical protein
Translate Function Assignments



Context on contig NC_004369 from base 871792 to 882272 (10481 bp)

Fid Start End Size
(nt)
  Gap Find
best
clusters
Pins Fc-sc SS Ev Function Aliases
836 871792 872286 495 +       3: 2 1 3   tmRNA-binding protein SmpB gene_name|smpB, locus|CE0814, protein_id|NP_737424.1, gi|25027370, geneID|1032920
837 872286 872645 360 + -1         DUF488 family protein SAV0238 locus|CE0815, protein_id|NP_737425.1, gi|25027371, geneID|1032921
838 873272 874537 1266 + 626         Integrase locus|CE0816, protein_id|NP_737426.1, gi|25027372, geneID|1032922
839 875622 874987 636 - 449         FIG00548736: hypothetical protein locus|CE0818, protein_id|NP_737428.1, gi|25027374, geneID|1032924
840 875953 875774 180 - 151         FIG00546693: hypothetical protein locus|CE0819, protein_id|NP_737429.1, gi|25027375, geneID|1032925
841 876093 876287 195 + 139         hypothetical protein  
842 876988 876839 150 - 551         hypothetical protein locus|CE0821, protein_id|NP_737431.1, gi|25027377, geneID|1032927
843 879243 879482 240 + 2254         hypothetical protein locus|CE0825, protein_id|NP_737435.1, gi|25027381, geneID|1032931
844 879697 879575 123 - 92         hypothetical protein  
845 880015 880233 219 + 317         hypothetical protein locus|CE0827, protein_id|NP_737437.1, gi|25027383, geneID|1032933
846 880497 881018 522 + 263         hypothetical protein locus|CE0828, protein_id|NP_737438.1, gi|25027384, geneID|1032934
847 881146 881979 834 + 127         FIG00549605: hypothetical protein locus|CE0829, protein_id|NP_737439.1, gi|25027385, geneID|1032935
848 881988 882272 285 + 8         FIG00549153: hypothetical protein locus|CE0830, protein_id|NP_737440.1, gi|25027386, geneID|1032936

Annotation History   /   View All Related Annotations Help on Annotations



  Subsystems in Which This Protein Plays a Role

This PEG is currently not present in any subsytem.

  Protein Sequence

>fig|196164.6.peg.842 hypothetical protein
MSEMGVNASSANPDGVENILRDSNFQMHLHDNGPARENGAYRAAWEAQN

MD5 = 94ec88379c8c7b654fbc72d3e365861d


  DNA Sequence

>fig|196164.6.peg.842 hypothetical protein
gtgtccgagatgggagtcaacgcctcctctgccaacccggatggtgtggagaacatcctg
cgtgacagcaacttccagatgcatcttcatgacaatggcccggcgcgtgaaaacggggcg
tatcgggcagcgtgggaagcccagaactaa


  DNA with Flanking Sequence

>fig|196164.6.peg.842 hypothetical protein
caggaaccacactgaatttactgaactaaggttgagaaatgaaaaaaggctccaagattg
ccctagccgttgtcgggacgctgattgttatcggtggcatcagctccattgcaaccgagg
acgatgaaagtgtcacaactgccggggacacccccacttcaccttcttccgcagcagaag
ttcctccagccgaagagctagatccatcccctgaagaagctttggatgaggcagagaccc
tcgcttggatggaaacggacaactaccaagagttctgcacaggagaacctgatatcgacc
cggagcttcaacaggctgttgacgctgtagacattcccgagcaggggcatgtccaattca
caaacattgggaccgatagagacaacgaagaaatggttacagtgttcttcgcggtctgct
ccccagcggagggtgacgatctccgcgcaattgcagaggacctagcggtcgaggttcaat
ccagccctatcggtacaaccgtgtccgagatgggagtcaacgcctcctctgccaacccgg
atggtgtggagaacatcctgcgtgacagcaacttccagatgcatcttcatgacaatggcc
cggcgcgtgaaaacggggcgtatcgggcagcgtgggaagcccagaactaagtaaaacctt
ctcccgtctcacccccactcccccgtaactgcccgccaaagtcgctcatctgctgtacga
tcacacgaaaaaccaacccgcatcacagggaaaacacatcgtggaagtgcaggggaaatg
aaccgtcgaccatcagtcatcaagactgtcctcgcctgggcaggcatcgccatcggcatc
atcttcttactaggttccttgatggcgggagatgtactcgcgggaatcctcattgccctg
gccttcatcgcacccggtgcgtggtggttgtggtgcactgctcaggataagaagggcgcg
gggccatctaaacggcgttggggcacggtggccaccgcgtcggtagccgcgttcatagcc
ggaagcgtggcactaccagcttcggacaccaccgctgagaccaccacctcgccgacgacg
tcagtcgcgactacgacttccaccacctcttcagcgacgactacgtccagggcgtcgact
acacgctcga


  Assignments for Essentially Identical Proteins

No essentially identical proteins found

  Links to Related Entries in Other Sites

This PEG has no links.
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  Functional Coupling

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  Attributes

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  Protein Families

No protein families found

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