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SEED version cvs.1555556707 (3/17/2019 22:5:7) on gum.mcs.anl.gov
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Protein fig|155920.4.peg.3353: Xylella fastidiosa subsp. sandyi Ann-1

This feature in The SEED Viewer

NCBI Taxonomy Id: 155920

Current Assignment: DNA helicase, phage-associated
Translate Function Assignments



Context on contig NZ_AAAM03000044 from base 2594 to 15400 (12807 bp)

Fid Start End Size
(nt)
  Gap Find
best
clusters
Pins Fc-sc SS Ev Function Aliases
3347 2594 3856 1263 +           Phage protein locus|XfasoDRAFT_2201, protein_id|ZP_00682454.1, gi|71900319
3348 3856 4422 567 + -1         Phage protein locus|XfasoDRAFT_2202, protein_id|ZP_00682455.1, gi|71900320
3349 4491 5657 1167 + 68         Phage antirepressor protein locus|XfasoDRAFT_2203, protein_id|ZP_00682456.1, gi|71900321, InterPro:IPR003497
3350 5659 7839 2181 + 1 7     phage-related DNA polymerase locus|XfasoDRAFT_2204, protein_id|ZP_00682457.1, gi|71900322, InterPro:IPR001098
3351 7836 8114 279 + -4 8     Phage protein locus|XfasoDRAFT_2205, protein_id|ZP_00682458.1, gi|71900323
3352 8442 8116 327 - 1         Phage protein locus|XfasoDRAFT_2206, protein_id|ZP_00682459.1, gi|71900324
3353 8527 9945 1419 + 84       DNA helicase, phage-associated locus|XfasoDRAFT_2207, protein_id|ZP_00682460.1, gi|71900325, InterPro:IPR000330, InterPro:IPR000566, InterPro:IPR001410
3354 9958 10182 225 + 12         hypothetical protein  
rna.54 11519 11445 75 - 1262     1: 8   tRNA-Val-CAC  
3356 11848 11579 270 - 59         Type IV pilus biogenesis protein PilZ locus|XfasoDRAFT_2209, protein_id|ZP_00682462.1, gi|71900327, InterPro:IPR009875
3357 12924 11932 993 - 83     2: 9 7   DNA polymerase III delta prime subunit (EC 2.7.7.7) locus|XfasoDRAFT_2210, protein_id|ZP_00682463.1, gi|71900328, InterPro:IPR000449, InterPro:IPR003439
3358 14024 12921 1104 - -4     3: 1 5 6   FIG004453: protein YceG like locus|XfasoDRAFT_2211, protein_id|ZP_00682464.1, gi|71900329, InterPro:IPR003770
3359 15400 14087 1314 - 62     6: 3 11 4 12 2 10   Para-aminobenzoate synthase, aminase component (EC 2.6.1.85) locus|XfasoDRAFT_2212, protein_id|ZP_00682465.1, gi|71900330, InterPro:IPR005801, InterPro:IPR006805, InterPro:IPR010118

Annotation History   /   View All Related Annotations Help on Annotations



  Subsystems in Which This Protein Plays a Role

This PEG is currently not present in any subsytem.

  Protein Sequence

>fig|155920.4.peg.3353 DNA helicase, phage-associated
MNLRPYQHTIVDFILTHPRCNLFVPMGLGKTVATLTALDVLLVVEDIAPILVIAPLRVAA
TTWPDEVAKFPHLRHLRVSVVVGSAAARRHALEQDADIYCINYDNLKWLVEFYKDRWPFR
MVVADECSKLKGFRLRQGTRRARALAKHVHTKVERYIGLTGTPAPNGLQDLWALMWMVDR
GARLGTHFKAFIDRWFRAVQIGSDPHAVRLVPAPNASQEIQDKIRDLCLSLDPHAYFDLR
QPIVNTIRVALPEHAQRLYKAMEQDMFIALECGAEVEAFNAASKTIKCLQLANGALYTDD
TRQAWEVVHDAKLEALHDIIEEAAGMPVLVAYHFKSDVARLQRAFPKGRALDKNPDTIRD
WNAGNIPVLFAHPASAGHGLNLQDGGNILAFFGHWWDLEQYQQIIERIGPTRQAQAGHTR
PVFIHHIVAANTVDELVMARRESKREVQDLLLEAVKRRETGKQLTSQGAIAL

MD5 = 8b94e3b31a9af72f9fcd89e6d0e18cb6


  DNA Sequence

>fig|155920.4.peg.3353 DNA helicase, phage-associated
atgaacctgcgcccctaccaacacaccatcgttgatttcatcctgacgcacccacgctgc
aatctattcgtgcccatgggtttaggaaagacggtggcaacgctgacggcgttagatgtg
ctcctggtggtcgaagacattgcgcctattttggtgattgctccgctgcgcgttgctgcc
acgacatggccggatgaggtggccaagttcccccatttgcgccatctgcgggtgtccgtg
gtcgtgggtagtgcggcggcacgtcgccacgccttggagcaggacgcggatatctactgc
attaattacgacaatctgaaatggttagtggagttttacaaggaccgttggccgttccgt
atggtggtcgccgatgagtgctccaagctgaaagggttccggctgcggcaaggaacacgg
cgcgcccgcgcactggccaagcatgtgcataccaaggtggagcgctacattgggttgacc
ggcacgcccgcgccgaatgggctacaggacctgtgggcgctgatgtggatggtggatcgt
ggggcacggcttgggactcattttaaagcgtttatcgatcgctggttccgtgcggtgcag
atcggcagtgatccgcatgcggtgcgccttgtgcccgcgccaaatgcatctcaagagatt
caagacaagatacgcgacctctgtttatcacttgatccacatgcgtatttcgatttacgc
cagccgattgtcaatacgattcgcgttgcgttgccagaacatgcgcaacgtctgtacaag
gccatggaacaagacatgttcatcgccttggaatgcggtgccgaagtagaagcctttaac
gccgccagtaaaaccataaaatgcctgcaactggccaatggtgcgctgtataccgatgac
acacgccaggcttgggaagtcgtccacgacgcaaaactagaggcgctgcacgacattatc
gaagaagccgccggtatgccggtgttggtggcgtatcactttaaaagtgatgtagcacgg
ttgcagcgtgccttccccaaggggcgtgctttggacaaaaaccccgacacgatccgcgat
tggaatgcggggaacattcccgtgctatttgcccatccggccagtgccggtcatggctta
aatctgcaagacggcggaaatattttggccttcttcggccactggtgggacctggagcag
taccagcagatcatcgaacgcatcggaccgacacgtcaggcgcaagccggacatacgcgg
cctgtatttattcaccacatcgtggcggcgaacacggtggatgaattggtgatggcccgc
cgtgaatccaaacgcgaagtacaggacctgctgctggaagcggtgaaacgcagagaaaca
ggcaaacaactcacatcacaaggagcaatcgcgttatga


  DNA with Flanking Sequence

>fig|155920.4.peg.3353 DNA helicase, phage-associated
agtccgtgagcatgagcgcctgcgtcgcatgggccagcgcgtggtcgtggtcgattcctt
taaaggcgtggatgaggtgctggcgtgactcagaaaaacgctttgatgatcagtgccacc
aggctagtgacgatcacaccgaacatccattttagtagcagcatttcgccttttatttca
gcgaaccctttatgtacatcaacgaaccctttatgtacatcagcgaaccctttatctatt
tttgattcgagctttaattccagctcccgcaaatctcgctttgtcgcaaggtcttgcaaa
ttcgtttctagcacttccgccaaggcttcggcttccgcctccgcatgggccgcaggaacc
cctgccgttttcagccggttcgcaaatttaagcgtatcgaacgctacggatgtcacacat
acccccgctttagctccatgtgatggcgagtatagcagtgcgcctcccgcccatcctgaa
gcgctgcacggagcgttggcatgaacctgcgcccctaccaacacaccatcgttgatttca
tcctgacgcacccacgctgcaatctattcgtgcccatgggtttaggaaagacggtggcaa
cgctgacggcgttagatgtgctcctggtggtcgaagacattgcgcctattttggtgattg
ctccgctgcgcgttgctgccacgacatggccggatgaggtggccaagttcccccatttgc
gccatctgcgggtgtccgtggtcgtgggtagtgcggcggcacgtcgccacgccttggagc
aggacgcggatatctactgcattaattacgacaatctgaaatggttagtggagttttaca
aggaccgttggccgttccgtatggtggtcgccgatgagtgctccaagctgaaagggttcc
ggctgcggcaaggaacacggcgcgcccgcgcactggccaagcatgtgcataccaaggtgg
agcgctacattgggttgaccggcacgcccgcgccgaatgggctacaggacctgtgggcgc
tgatgtggatggtggatcgtggggcacggcttgggactcattttaaagcgtttatcgatc
gctggttccgtgcggtgcagatcggcagtgatccgcatgcggtgcgccttgtgcccgcgc
caaatgcatctcaagagattcaagacaagatacgcgacctctgtttatcacttgatccac
atgcgtatttcgatttacgccagccgattgtcaatacgattcgcgttgcgttgccagaac
atgcgcaacgtctgtacaaggccatggaacaagacatgttcatcgccttggaatgcggtg
ccgaagtagaagcctttaacgccgccagtaaaaccataaaatgcctgcaactggccaatg
gtgcgctgtataccgatgacacacgccaggcttgggaagtcgtccacgacgcaaaactag
aggcgctgcacgacattatcgaagaagccgccggtatgccggtgttggtggcgtatcact
ttaaaagtgatgtagcacggttgcagcgtgccttccccaaggggcgtgctttggacaaaa
accccgacacgatccgcgattggaatgcggggaacattcccgtgctatttgcccatccgg
ccagtgccggtcatggcttaaatctgcaagacggcggaaatattttggccttcttcggcc
actggtgggacctggagcagtaccagcagatcatcgaacgcatcggaccgacacgtcagg
cgcaagccggacatacgcggcctgtatttattcaccacatcgtggcggcgaacacggtgg
atgaattggtgatggcccgccgtgaatccaaacgcgaagtacaggacctgctgctggaag
cggtgaaacgcagagaaacaggcaaacaactcacatcacaaggagcaatcgcgttatgaa
caacccatcaaatgaaaagcatcaagacaccccgccactcgagttatccgatgaatgtgc
gcgtattcgcgaacacatgtcctttatcgaagccttggtcactaatatggtcgctgaaaa
agagaaagaagaaagacgcggaagcggaaaaactcaaagagggaacccaccgagaggccg
cattaggggagttacaggagcgtactacaggagggcacggggatgagcgctgctgaaaaa
cttcccgagttgtataccgaagaggaagccgcacgccgactcctcgtcagcaaagccaca
ctcacccgagaacgcatggcgggccggatacatcccattcgtatcagtacccggatttac
aggtacagcaatcaaatcattgaggagtacattcaacaatgcaggaacgtccaggacaaa
tcgggaaatactggctcagtcggcgtaccgactctaaaaactggtatcgaacatggtgcg
agtctgctactcgacggac


  Assignments for Essentially Identical Proteins

Id Organism Who ASSIGN Assignment
GO:0003677       F:DNA binding
GO:0005524       F:ATP binding
fig|155919.4.peg.103 Xylella fastidiosa Dixon FIG   DNA helicase, phage-associated
gb|EAO13942.1 Xylella fastidiosa Dixon     SNF2-related
gb|EAO31996.1 Xylella fastidiosa Ann-1     SNF2-related
gi|71164228 Xylella fastidiosa Dixon NCBI   SNF2-related
gi|71274496 Xylella fastidiosa Dixon NCBI   SNF2-related
gi|71729900 Xylella fastidiosa Ann-1 NCBI   SNF2-related
gi|71900325 Xylella fastidiosa Ann-1 NCBI   SNF2-related
img|638353203 Xylella fastidiosa Dixon IMG   SNF2-related
img|638358246 Xylella fastidiosa Ann-1 IMG   SNF2-related
ref|ZP_00650784.1 Xylella fastidiosa Dixon RefSeq   SNF2-related
ref|ZP_00682460.1 Xylella fastidiosa Ann-1 RefSeq   SNF2-related
tr|Q3R445 Xylella fastidiosa Ann-1 TrEMBL   SNF2-related
tr|Q3RI87 Xylella fastidiosa Dixon TrEMBL   SNF2-related


  Links to Related Entries in Other Sites

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  Functional Coupling

Score Peg Function
7 fig|155920.4.peg.3350 phage-related DNA polymerase
8 fig|155920.4.peg.3351 Phage protein


  Attributes

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  Protein Families

No protein families found

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