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SEED version cvs.1555556707 (3/17/2019 22:5:7) on gum.mcs.anl.gov
 The SEED


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Protein fig|155920.4.peg.3348: Xylella fastidiosa subsp. sandyi Ann-1

This feature in The SEED Viewer

NCBI Taxonomy Id: 155920

Current Assignment: Phage protein
Translate Function Assignments


Context on contig NZ_AAAM03000044 from base 271 to 9945 (9675 bp)

Fid Start End Size
(nt)		   Gap Find
best
clusters		 Pins Fc-sc SS Ev Function Aliases
3340 271 603 333 +           hypothetical protein locus|XfasoDRAFT_2196, protein_id|ZP_00682449.1, gi|71900314
3341 600 1061 462 + -4         conserved hypothetical protein locus|XfasoDRAFT_2197, protein_id|ZP_00682450.1, gi|71900315
3342 1058 1465 408 + -4         FIG01217517: hypothetical protein locus|XfasoDRAFT_2198, protein_id|ZP_00682451.1, gi|71900316
3343 1462 1653 192 + -4         FIG01218187: hypothetical protein locus|XfasoDRAFT_2199, protein_id|ZP_00682452.1, gi|71900317
3344 1677 1868 192 + 23         conserved hypothetical protein locus|XfasoDRAFT_2227, protein_id|ZP_00682480.1, gi|71900345
3345 1900 2094 195 + 31         FIG01217231: hypothetical protein locus|XfasoDRAFT_2228, protein_id|ZP_00682481.1, gi|71900346
3346 2151 2582 432 + 56         FIG01217753: hypothetical protein locus|XfasoDRAFT_2200, protein_id|ZP_00682453.1, gi|71900318
3347 2594 3856 1263 + 11 9     Phage protein locus|XfasoDRAFT_2201, protein_id|ZP_00682454.1, gi|71900319
3348 3856 4422 567 + -1       Phage protein locus|XfasoDRAFT_2202, protein_id|ZP_00682455.1, gi|71900320
3349 4491 5657 1167 + 68         Phage antirepressor protein locus|XfasoDRAFT_2203, protein_id|ZP_00682456.1, gi|71900321, InterPro:IPR003497
3350 5659 7839 2181 + 1 10     phage-related DNA polymerase locus|XfasoDRAFT_2204, protein_id|ZP_00682457.1, gi|71900322, InterPro:IPR001098
3351 7836 8114 279 + -4         Phage protein locus|XfasoDRAFT_2205, protein_id|ZP_00682458.1, gi|71900323
3352 8442 8116 327 - 1         Phage protein locus|XfasoDRAFT_2206, protein_id|ZP_00682459.1, gi|71900324
3353 8527 9945 1419 + 84         DNA helicase, phage-associated locus|XfasoDRAFT_2207, protein_id|ZP_00682460.1, gi|71900325, InterPro:IPR000330, InterPro:IPR000566, InterPro:IPR001410

Annotation History   /   View All Related Annotations Help on Annotations


  Subsystems in Which This Protein Plays a Role

This PEG is currently not present in any subsytem.

  Protein Sequence

>fig|155920.4.peg.3348 Phage protein
MKLTLKNVRLAFPVLFEPKKVNGEGEAAFSACFLIDPADPQVKALNQAIDKMANDKWGVK
AAAQLKQMRMGDRVALHDGDLKASYDGFAGHLYVSARNKSRPLVVDRDRTPLTAQDGRPY
AGCYVNANIELWAQDNNYGKRINASLGGVQFLRDGEAFAGGGVASVEDFEDLSNVAELVD
VEEAMPWG

MD5 = 6fd26d379f650f0f795efefab50cab13


  DNA Sequence

>fig|155920.4.peg.3348 Phage protein
atgaaactcaccctaaaaaacgtgcgcttagccttccccgtgttgtttgaacccaagaaa
gtcaatggcgaaggcgaggccgcattctcggcctgcttcctgattgaccctgccgacccg
caagtcaaagcccttaaccaggccattgacaagatggccaatgacaaatggggcgttaag
gcggcggctcagcttaaacagatgcgtatgggcgacagagtcgccttgcatgatggcgac
ctgaaagccagctatgacgggtttgcagggcacctatacgtctctgcgcgtaacaagtca
cggccactggtggtcgaccgtgaccggaccccgctcaccgcgcaggacggcaggccgtat
gccggatgttacgtcaacgccaacatagaactctgggcgcaggacaacaactacggcaag
cggattaacgcctcactgggtggcgtgcagttcctgcgtgatggcgaggcgttcgctgga
ggcggtgtggccagcgtggaggacttcgaggacctgagcaacgtcgccgagctggtggat
gttgaagaagccatgccgtgggggtga


  DNA with Flanking Sequence

>fig|155920.4.peg.3348 Phage protein
gtcccgcagctcagctacgcggccctgcgcacgtttgacaacaccacgctggcctgcctg
tttggcgcaacagagttaatcgaatcctggtgcaaatctattcgcgacagggcggcagcg
gagttgctttcaggccagcccgtgcctggatacaaggtggttcaaggccgacacgggccg
cgccgttgggtggatgagacagccgccgaggacgcgctcaaacagctgcgcatcaaattc
aaagacatgtacgacgtgtctctcatcagccccacgcgtgccgagaaactctaccaggcc
ggagtcattggtgatcgccagtggccaaagctccaaccgctcattcatagggcagcaggg
acgcccgttgttgttcccacatcggataaacgccccccgctcgcccttcaagacgcgacg
gatttccaggacttgagcgacatgcccatccccccactcccagacacagcaccctcactt
caatctcaggagacaccgtaatgaaactcaccctaaaaaacgtgcgcttagccttccccg
tgttgtttgaacccaagaaagtcaatggcgaaggcgaggccgcattctcggcctgcttcc
tgattgaccctgccgacccgcaagtcaaagcccttaaccaggccattgacaagatggcca
atgacaaatggggcgttaaggcggcggctcagcttaaacagatgcgtatgggcgacagag
tcgccttgcatgatggcgacctgaaagccagctatgacgggtttgcagggcacctatacg
tctctgcgcgtaacaagtcacggccactggtggtcgaccgtgaccggaccccgctcaccg
cgcaggacggcaggccgtatgccggatgttacgtcaacgccaacatagaactctgggcgc
aggacaacaactacggcaagcggattaacgcctcactgggtggcgtgcagttcctgcgtg
atggcgaggcgttcgctggaggcggtgtggccagcgtggaggacttcgaggacctgagca
acgtcgccgagctggtggatgttgaagaagccatgccgtgggggtgaaccccgatgtggg
agggcgtttcgtcctcccacgccccagctccccttatccctgtatggacaacctcatgaa
tacaccctctgagttcactctccagtttgaatcccacgccgtgcgtgtccagcttgatga
acatgagcggcgatggtttaacgccaatgacatttgcacggcgttggagttgttaaatcc
atgtgccgcacttgctcagcatgtgggtgccgagaatgtatcgaaacgcaaaaccatcga
cgccgttgggtggactaagcacgccaactatttgaacgagtcaggggtgtacgccttgct
catcggcagcaccaaagaggcggctaaacgctttagacagtggctgaccgatgaagcgct
gcccgcagctcaaaaagcagggcatcacatcatccctctgcacagcgcaatcgacagtgc
gccttccgccccaagccccttccaacacacagagaaccacacaatgaacgcaatcactcc
attccaa


  Assignments for Essentially Identical Proteins

Id Organism Who ASSIGN Assignment
fig|155919.4.peg.2321 Xylella fastidiosa Dixon FIG   Phage protein
gb|EAO12597.1 Xylella fastidiosa Dixon     phage-related protein
gb|EAO31991.1 Xylella fastidiosa Ann-1     phage-related protein
gi|71162873 Xylella fastidiosa Dixon NCBI   phage-related protein
gi|71276265 Xylella fastidiosa Dixon NCBI   phage-related protein
gi|71729895 Xylella fastidiosa Ann-1 NCBI   phage-related protein
gi|71900320 Xylella fastidiosa Ann-1 NCBI   phage-related protein
img|638354996 Xylella fastidiosa Dixon IMG   phage-related protein
img|638358241 Xylella fastidiosa Ann-1 IMG   phage-related protein
ref|ZP_00652543.1 Xylella fastidiosa Dixon RefSeq   phage-related protein
ref|ZP_00682455.1 Xylella fastidiosa Ann-1 RefSeq   phage-related protein
tr|Q3R450 Xylella fastidiosa Ann-1 TrEMBL   Phage-related protein
tr|Q3RD83 Xylella fastidiosa Dixon TrEMBL   Phage-related protein


  Links to Related Entries in Other Sites

This PEG has no links.
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  Functional Coupling

Score Peg Function
9 fig|155920.4.peg.3347 Phage protein
10 fig|155920.4.peg.3350 phage-related DNA polymerase


  Attributes

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  Protein Families

No protein families found

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