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SEED version cvs.1555556707 (3/17/2019 22:5:7) on gum.mcs.anl.gov
 The SEED


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Protein fig|155920.4.peg.3345: Xylella fastidiosa subsp. sandyi Ann-1

This feature in The SEED Viewer

NCBI Taxonomy Id: 155920

Current Assignment: FIG01217231: hypothetical protein
Translate Function Assignments


Context on contig NZ_AAAM03000044 from base 271 to 7839 (7569 bp)

Fid Start End Size
(nt)		   Gap Find
best
clusters		 Pins Fc-sc SS Ev Function Aliases
3340 271 603 333 +           hypothetical protein locus|XfasoDRAFT_2196, protein_id|ZP_00682449.1, gi|71900314
3341 600 1061 462 + -4         conserved hypothetical protein locus|XfasoDRAFT_2197, protein_id|ZP_00682450.1, gi|71900315
3342 1058 1465 408 + -4         FIG01217517: hypothetical protein locus|XfasoDRAFT_2198, protein_id|ZP_00682451.1, gi|71900316
3343 1462 1653 192 + -4         FIG01218187: hypothetical protein locus|XfasoDRAFT_2199, protein_id|ZP_00682452.1, gi|71900317
3344 1677 1868 192 + 23         conserved hypothetical protein locus|XfasoDRAFT_2227, protein_id|ZP_00682480.1, gi|71900345
3345 1900 2094 195 + 31         FIG01217231: hypothetical protein locus|XfasoDRAFT_2228, protein_id|ZP_00682481.1, gi|71900346
3346 2151 2582 432 + 56         FIG01217753: hypothetical protein locus|XfasoDRAFT_2200, protein_id|ZP_00682453.1, gi|71900318
3347 2594 3856 1263 + 11         Phage protein locus|XfasoDRAFT_2201, protein_id|ZP_00682454.1, gi|71900319
3348 3856 4422 567 + -1         Phage protein locus|XfasoDRAFT_2202, protein_id|ZP_00682455.1, gi|71900320
3349 4491 5657 1167 + 68         Phage antirepressor protein locus|XfasoDRAFT_2203, protein_id|ZP_00682456.1, gi|71900321, InterPro:IPR003497
3350 5659 7839 2181 + 1         phage-related DNA polymerase locus|XfasoDRAFT_2204, protein_id|ZP_00682457.1, gi|71900322, InterPro:IPR001098

Annotation History   /   View All Related Annotations Help on Annotations


  Subsystems in Which This Protein Plays a Role

This PEG is currently not present in any subsytem.

  Protein Sequence

>fig|155920.4.peg.3345 FIG01217231: hypothetical protein
MSPPMPTALLMRSMSDNELVSDLTTRQAVERFTPVERELLSRLKGLLEDYEAVRDALEQD
GDAL

MD5 = 4629d848c2f75973da85088efa8cbee5


  DNA Sequence

>fig|155920.4.peg.3345 FIG01217231: hypothetical protein
atgtcgcctcccatgccgacagcactactcatgcgttcaatgagtgataacgaacttgtg
agtgacctaacaaccaggcaagccgtggagcgttttacgcctgtggaaagggagttgtta
tcgcgtcttaaaggcttgctagaagactacgaagcggtgcgtgacgcactggagcaagac
ggcgatgcgctgtga


  DNA with Flanking Sequence

>fig|155920.4.peg.3345 FIG01217231: hypothetical protein
acagcgcaagaagcgcattggtatcaccgtagcggtatcgatgccatgcaggagaactac
gcatgatcccctgcaccatcaccgcacgcaccaagcagggtgtgtacacctatatcggcc
tgtttcagaaaactgttgaggcgaagtctgacgcctaccggcgctttgggttcccagccg
ttattgccgtcacagccatccaccgcaaatcaatgcgaaacaacacgcatcccagcccgc
cacgtgcggcgtgatttgacacaggaaaaacctaccgatgaaccgctatcgcacaccgaa
agaacaacacgctgcacgttgcaatgactacgcacaccctgggttagcccactgcatttt
gcgcgatacccaagcaatgcccaatgcactacgcatcgccaattaccgcgttcgccgcgc
gcactacgaagccgccaaaacgctttcatcgttattgattaaacactaatcccgaacgtg
tttctggaaggagtttttatatgtcgcctcccatgccgacagcactactcatgcgttcaa
tgagtgataacgaacttgtgagtgacctaacaaccaggcaagccgtggagcgttttacgc
ctgtggaaagggagttgttatcgcgtcttaaaggcttgctagaagactacgaagcggtgc
gtgacgcactggagcaagacggcgatgcgctgtgatgacaacggacaacacatcggaacg
gaacaacccacacacgagagaaaaaaaacccatgtttcctatcaccgtcacgattaccga
tcaggcccaattaaacgctgtgttagcggtgcttaacccgccccgcagcacgagcagccc
cgcgcaacctgtgtttgacgatacaccgcgcagcgataacgcccctagccctccaccggc
ggcacctcctcccccaacggatgtggcgcaaccggcggccaaccctgctgctgctcagag
cacaacggacgttatgagcacgcctgggtatcttgaggcggcgaaggcgttaacggccct
gtctaaagagcttggcaatacatacgccaaagacgtgttgaagtcatttggcgtggctgg
cctctctcaaatccctccggagttgtacccaacgctgatggagcgcatcgaaggatttta
catcgcccacgaacgcggtttgcccttagacggtgagacatgagccagcacgcca


  Assignments for Essentially Identical Proteins

Id Organism Who ASSIGN Assignment
fig|155919.4.peg.2318 Xylella fastidiosa Dixon FIG   FIG01217231: hypothetical protein
fig|405440.3.peg.1078 Xylella fastidiosa M12 FIG   FIG01217231: hypothetical protein
fig|405440.5.peg.1391 Xylella fastidiosa M12 FIG   FIG01217231: hypothetical protein
gb|ACA12132.1 Xylella fastidiosa M12     conserved hypothetical protein
gb|EAO12658.1 Xylella fastidiosa Dixon     conserved hypothetical protein
gb|EAO32017.1 Xylella fastidiosa Ann-1     conserved hypothetical protein
gi|167965122 Xylella fastidiosa M12 NCBI   conserved hypothetical protein
gi|170730329 Xylella fastidiosa M12 NCBI   hypothetical protein Xfasm12_1181
gi|71162934 Xylella fastidiosa Dixon NCBI   conserved hypothetical protein
gi|71276326 Xylella fastidiosa Dixon NCBI   conserved hypothetical protein
gi|71729921 Xylella fastidiosa Ann-1 NCBI   conserved hypothetical protein
gi|71900346 Xylella fastidiosa Ann-1 NCBI   conserved hypothetical protein
img|638354993 Xylella fastidiosa Dixon IMG   conserved hypothetical protein
img|638358238 Xylella fastidiosa Ann-1 IMG   conserved hypothetical protein
img|641649200 Xylella fastidiosa M12 IMG   hypothetical protein
kegg|xfm:Xfasm12_1181 Xylella fastidiosa M12 KEGG   hypothetical protein
ref|YP_001775762.1 Xylella fastidiosa M12 RefSeq   hypothetical protein Xfasm12_1181
ref|ZP_00652604.1 Xylella fastidiosa Dixon RefSeq   conserved hypothetical protein
ref|ZP_00682481.1 Xylella fastidiosa Ann-1 RefSeq   conserved hypothetical protein
tr|B0U2Q3 Xylella fastidiosa (strain M12) TrEMBL   Putative uncharacterized protein
tr|Q3R453 Xylella fastidiosa Ann-1 TrEMBL   Putative uncharacterized protein
tr|Q3RD86 Xylella fastidiosa Dixon TrEMBL   Putative uncharacterized protein


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  Functional Coupling

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  Attributes

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  Protein Families

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