Protein Page for fig|1165952.3.peg.810

SEED version cvs.1555556707 (3/17/2019 22:5:7) on aspen.cels.anl.gov

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Protein fig|1165952.3.peg.810: Escherichia coli O26:H11 str. CVM10030

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NCBI Taxonomy Id: 1165952

Current Assignment: Phage DNA binding protein Roi

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Context on contig AKBA01000028 from base 115 to 4176 (4062 bp)


Fid	Start	End	Size (nt)		Gap	Function	Aliases
806	804	115	690	-		Phage antitermination protein Q	locus\|ECO10030_12359, protein_id\|EJF04004.1, gi\|394431855
807	1280	2239	960	+	475	Outer membrane protein	locus\|ECO10030_12364, protein_id\|EJF04005.1, gi\|394431856
808	2998	2636	363	-	396	Holliday junction resolvase / Crossover junction endodeoxyribonuclease rusA (EC 3.1.22.-)	locus\|ECO10030_12374, protein_id\|EJF04007.1, gi\|394431858
809	3285	2995	291	-	-4	hypothetical protein	locus\|ECO10030_12379, protein_id\|EJF04008.1, gi\|394431859
810	4007	3285	723	-	-1	Phage DNA binding protein Roi	locus\|ECO10030_12384, protein_id\|EJF04009.1, gi\|394431860
811	4176	4000	177	-	-8	Phage NinF	locus\|ECO10030_12389, protein_id\|EJF04010.1, gi\|394431861

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This PEG is currently not present in any subsytem.

Protein Sequence

>fig|1165952.3.peg.810 Phage DNA binding protein Roi
MNELINGNAIKMTSIEIAELVGKRHDNVKRTIETLAKNGVIRLPQIEVSERINNLGFNVQ
YEHYVFEGEQGKRDSIVVVAQLSPEFTARLVDRWRELEETAVNIPKTLPEALRLAADLAE
QKMQLENQLAIAAPKVEFADRVGEASGILIGNFAKVVGIGPNKLFAWMRDHKILIASGSR
RNVPMQEYMDRGYFTVKETAVNTNHGIQISFTTKITGRGQQWLTRKLLDNGMLKVTGEAA

MD5 = dc2a5647a3cbd8d6c4bc7d00e1981fa6

DNA Sequence

>fig|1165952.3.peg.810 Phage DNA binding protein Roi
atgaatgagttaataaatggcaatgccatcaaaatgacaagcattgaaatagctgagttg
gtgggtaagcgtcatgacaatgtgaaacgtaccatcgaaacgctggctaaaaatggtgtt
atccggcttcctcaaattgaggtttccgaaagaatcaataacttagggttcaatgttcag
tacgagcattacgtcttcgagggcgaacaaggtaagcgagacagtattgtcgttgttgcc
cagttgtcgccagagttcaccgctcgtcttgttgaccgttggcgagagcttgaagaaact
gcggttaatatccccaaaacgttaccggaagcgttgcgccttgctgctgatcttgctgag
cagaaaatgcaactggaaaaccagctcgcaattgccgcacctaaagttgagtttgccgat
cgcgttggcgaggccagcggaattttgattggaaactttgcaaaggttgttggtattggt
ccaaacaaactgtttgcgtggatgcgcgatcacaaaatccttattgcttcaggttcccgg
cgcaatgtgccaatgcaggaatatatggatcgcggctatttcacagtgaaagaaacagcg
gtcaacacaaatcacggaatacagatatcgttcaccacaaaaatcaccgggcgtggtcaa
cagtggctgaccagaaagctgctcgataacggaatgctgaaagtaacaggggaggctgct
taa

DNA with Flanking Sequence

>fig|1165952.3.peg.810 Phage DNA binding protein Roi
gaaagccatgcttagcccatcccaatcccttcaataccagaaagaaagcgtcgagcgagc
tttaacgtgcgctaactgcggtcagaagctgcatgtgctggaagttcacgtgtgtgagta
ctgctgcgcagaactgatgagcgatccgaatagctcaatgtacgaggaagaagacgatga
atgagttaataaatggcaatgccatcaaaatgacaagcattgaaatagctgagttggtgg
gtaagcgtcatgacaatgtgaaacgtaccatcgaaacgctggctaaaaatggtgttatcc
ggcttcctcaaattgaggtttccgaaagaatcaataacttagggttcaatgttcagtacg
agcattacgtcttcgagggcgaacaaggtaagcgagacagtattgtcgttgttgcccagt
tgtcgccagagttcaccgctcgtcttgttgaccgttggcgagagcttgaagaaactgcgg
ttaatatccccaaaacgttaccggaagcgttgcgccttgctgctgatcttgctgagcaga
aaatgcaactggaaaaccagctcgcaattgccgcacctaaagttgagtttgccgatcgcg
ttggcgaggccagcggaattttgattggaaactttgcaaaggttgttggtattggtccaa
acaaactgtttgcgtggatgcgcgatcacaaaatccttattgcttcaggttcccggcgca
atgtgccaatgcaggaatatatggatcgcggctatttcacagtgaaagaaacagcggtca
acacaaatcacggaatacagatatcgttcaccacaaaaatcaccgggcgtggtcaacagt
ggctgaccagaaagctgctcgataacggaatgctgaaagtaacaggggaggctgcttaat
ggctaacctacgcaaagaatctcgcggcagagaatgccaggtacgtatttacggcatatg
caatggcaatcctgaaactacagttctggcacattaccggatggctggaatttgcggaac
gggaatgaagcctgacgacctgatcggcgcatgggcttgtagcgcgtgtcacgatgaaat
cgaccgacgcacccataacctcgacaacaaagacgccagactttaccacctcgaaggcgt
gatcaggacgcaggcgatactgctgaaggaggggaagattaagtcatgaacgaatatcag
tttgtgcttccatacccgccgtcggtgaatacctactggcgaagacggggaagccaatac
tacatcagcgataaaggccagaaataccgaaaagacgttcagcaaatcatccaccaactc
aagttagatattttcaccaaatcacgactccgcatcaaagtaatcgcagacgttccagac
tcccgccgccgcgacctag

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