The SEED: an Annotation/Analysis Tool Provided by FIG
[ Subsystem Forum | Essentiality Data | FIG Tutorials | Peer-to-peer Updates | (New) Clearinghouse | SEED Control Panel | NMPDR | SEED Wiki] [GOLD | "Complete" Genomes in SEED | ExPASy | IMG | KEGG | NCBI | TIGR cmr | UniProt | Report "Bugz"]
|
![]() |
Fid | Start | End | Size (nt) |
Gap | Find best clusters |
Pins | Fc-sc | SS | Ev | Function | Aliases | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
806 | 804 | 115 | 690 | - | ![]() |
Phage antitermination protein Q | locus|ECO10030_12359, protein_id|EJF04004.1, gi|394431855 | |||||
807 | 1280 | 2239 | 960 | + | 475 | ![]() |
Outer membrane protein | locus|ECO10030_12364, protein_id|EJF04005.1, gi|394431856 | ||||
808 | 2998 | 2636 | 363 | - | 396 | ![]() |
Holliday junction resolvase / Crossover junction endodeoxyribonuclease rusA (EC 3.1.22.-) | locus|ECO10030_12374, protein_id|EJF04007.1, gi|394431858 | ||||
809 | 3285 | 2995 | 291 | - | -4 | ![]() |
hypothetical protein | locus|ECO10030_12379, protein_id|EJF04008.1, gi|394431859 | ||||
810 | 4007 | 3285 | 723 | - | -1 | ![]() |
Phage DNA binding protein Roi | locus|ECO10030_12384, protein_id|EJF04009.1, gi|394431860 | ||||
811 | 4176 | 4000 | 177 | - | -8 | ![]() |
Phage NinF | locus|ECO10030_12389, protein_id|EJF04010.1, gi|394431861 |
Annotation History / View All Related Annotations | Help on Annotations |
Score | Peg | Function |
---|
Key Link Explains Key |
Value |
---|
Compare Regions |
| Psi-Blast | TMpred | TMHMM | Gram negative PSORT | Gram negative SignalP | Gram positive PSORT | Gram positive SignalP | LipoP | Radar | PPSearch | Gram negative CELLO | Gram positive CELLO | ProDom | PDB | RNAFold |
> Show tool descriptions