Protein Page for fig|1155766.14.peg.2504

SEED version cvs.1555556707 (3/17/2019 22:5:7) on gum.mcs.anl.gov

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Protein fig|1155766.14.peg.2504: Enterococcus faecium Aus0004

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NCBI Taxonomy Id: 1155766

Current Assignment: Phage integrase

Translate Function Assignments

Context on contig NC_017022 from base 2428604 to 2439956 (11353 bp)


Fid	Start	End	Size (nt)		Gap	Fc-sc	SS	Function	Aliases
2491	2428729	2428604	126	-				FIG00631505: hypothetical protein	locus\|EFAU004_02403, protein_id\|YP_005355604.1, gi\|383329720, geneID\|11955789
2492	2428871	2428698	174	-	-32			hypothetical protein	locus\|EFAU004_02404, protein_id\|YP_005355605.1, gi\|383329721, geneID\|11955790
2493	2429056	2428868	189	-	-4			FIG00629649: hypothetical protein	locus\|EFAU004_02405, protein_id\|YP_005355606.1, gi\|383329722, geneID\|11955791
2494	2429361	2429077	285	-	20			FIG00630724: hypothetical protein	locus\|EFAU004_02406, protein_id\|YP_005355607.1, gi\|383329723, geneID\|11955792
2495	2429708	2429409	300	-	47			FIG00629011: hypothetical protein	locus\|EFAU004_02407, protein_id\|YP_005355608.1, gi\|383329724, geneID\|11955793
2496	2430016	2429813	204	-	104			Helix-turn-helix domain protein	locus\|EFAU004_02408, protein_id\|YP_005355609.1, gi\|383329725, geneID\|11955794
2497	2430777	2430031	747	-	14			Phage antirepressor protein	locus\|EFAU004_02409, protein_id\|YP_005355610.1, gi\|383329726, geneID\|11955795
2498	2430855	2431163	309	+	77			hypothetical protein	locus\|EFAU004_02410, protein_id\|YP_005355611.1, gi\|383329727, geneID\|11955796
2499	2431391	2431134	258	-	-30			hypothetical protein	locus\|EFAU004_02411, protein_id\|YP_005355612.1, gi\|383329728, geneID\|11955797
2500	2431829	2431689	141	-	297			hypothetical protein	locus\|EFAU004_02412, protein_id\|YP_005355613.1, gi\|383329729, geneID\|11955798
2501	2432123	2432443	321	+	293	4		Helix-turn-helix motif	locus\|EFAU004_02413, protein_id\|YP_005355614.1, gi\|383329730, geneID\|11955799
2502	2432461	2432892	432	+	17			Protein of unknown function DUF955	locus\|EFAU004_02414, protein_id\|YP_005355615.1, gi\|383329731, geneID\|11955800
2503	2433019	2433603	585	+	126			hypothetical protein	locus\|EFAU004_02415, protein_id\|YP_005355616.1, gi\|383329732, geneID\|11955801
2504	2433714	2434853	1140	+	110			Phage integrase	gene_name\|xerC, locus\|EFAU004_02416, protein_id\|YP_005355617.1, gi\|383329733, geneID\|11955802
2505	2436567	2434942	1626	-	88		1: 1	Heat shock protein 60 family chaperone GroEL	gene_name\|groL, locus\|EFAU004_02417, protein_id\|YP_005355618.1, gi\|383329734, geneID\|11955803
2506	2436902	2436618	285	-	50		1: 1	Heat shock protein 60 family co-chaperone GroES	gene_name\|groS, locus\|EFAU004_02418, protein_id\|YP_005355619.1, gi\|383329735, geneID\|11955804
2507	2437127	2437789	663	+	224			YdiL	locus\|EFAU004_02419, protein_id\|YP_005355620.1, gi\|383329736, geneID\|11955805
2508	2439157	2437865	1293	-	75			PTS system, cellobiose-specific IIC component (EC 2.7.1.69)	locus\|EFAU004_02420, protein_id\|YP_005355621.1, gi\|383329737, geneID\|11955806
2509	2439327	2439956	630	+	169			Rrf2-linked NADH-flavin reductase	locus\|EFAU004_02421, protein_id\|YP_005355622.1, gi\|383329738, geneID\|11955807

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Subsystems in Which This Protein Plays a Role

This PEG is currently not present in any subsytem.

Protein Sequence

>fig|1155766.14.peg.2504 Phage integrase
MWVEQTKDGQFKFIERYVDPYTEKTRKKSTTLTSNSPQAWKKAQKILDKKIKEALENYNK
SDITFGELYKEWYEYYKQHVKRTSYLKVPMMMKHVSKHISDDTIVRNIDETLINKMIEDM
YTFGDLSLNYTKQTKTTLSVMLNYAIDRKYIQRNPALAVKIHPKKVEEEKRKLSMDKKYL
EKEEIDQILKQLYSNPRRKLHGIIAEFLYLTGLRYGELLALQMKDYEDGKISINGTLDYT
SVKMDNAIKTTPKNTYSQREVQLPNRAKELIESVIADNILAGRPTDPDQYIFISTSGTPL
TLHSFNAILHKVEEELELEKSLSSHIFRHSHVSLLSELGVPLKAIMERVGHSDANTTLSI
YNHVTKRAKQQVIDKLNSL

MD5 = 7fd1502831e5c8bc91be9115a9ef58aa

DNA Sequence

>fig|1155766.14.peg.2504 Phage integrase
gtgtgggttgaacaaaccaaagatggccaattcaagtttattgaaagatatgtagatcct
tatacagaaaaaacacgaaaaaaatctacaacacttacaagtaattcaccacaagcgtgg
aaaaaagctcagaaaattctagataaaaaaattaaagaagcactcgaaaattacaataaa
tcagatatcacttttggtgagctgtataaagaatggtatgaatattataagcagcatgtt
aaacgtactagctatttgaaggttccaatgatgatgaaacatgtttctaagcacataagc
gatgatacaatcgttagaaacattgatgagacactcattaataagatgattgaagatatg
tacacttttggtgatctctcactgaactacacaaagcaaacaaaaacaactctatccgtt
atgctaaactatgcaattgatagaaaatacattcaaagaaaccctgctctagcagttaaa
atccatcctaaaaaagtggaagaagaaaaaagaaagctttctatggataaaaaatatctg
gagaaagaagaaattgatcaaatactgaaacagttatattccaatcctcgcagaaaacta
cacggcataatagctgaatttctatatttgactggtttgagatatggggaattgctagct
ttgcaaatgaaggactatgaggatgggaaaatttccattaatgggaccttagattacaca
tctgtgaaaatggataatgctataaaaacaactccaaaaaatacttattcgcaacgtgaa
gtgcaattacccaatcgtgcaaaagaattgattgaaagtgtgatagctgacaatattctt
gcaggtagacccacagatcccgatcaatatatatttatatctacaagtggcactccgctt
acgctgcactcatttaacgctatactccataaagtagaggaagagttggaattagaaaaa
agtctatcctcacatatattcagacatagccacgtttcactattatctgaattaggcgta
cctcttaaagccattatggagcgtgtagggcattctgatgcaaacacaactctgtctatt
tataaccatgtaacaaaaagagccaaacaacaagtaattgataaactaaatagcctttga

DNA with Flanking Sequence

>fig|1155766.14.peg.2504 Phage integrase
tcttctaaagaagaaaaaagcgataccttctataagattggtgacactgtaaaagttggt
gatgctgaatatacactaaatagtgtagaactaactgatgaaagaaatcaatttgaagaa
aaccaacctgcacaagtagtaaaaattacttataccgtaaaaaatgatggcgattcagat
atccctgtaggtacagatgtggaagtatatggaccagatgacaaaaaatcagagacatat
gccaacgaaaatacaatgggatctgttgctccaggaaaacaaatggatgtaactgctcat
ttcacgttaaaccaaaagggagaaatagaaatccacttctctcctttagtatcatttgaa
aaagcagctatttttaaagcaactgtataataaataaaaaacacgccccaccgtccagag
taagagcgtgcttttagaaaacaaacctatataggtctatttgttatgcctattatagca
aatgataggagatgttaaaagtgtgggttgaacaaaccaaagatggccaattcaagttta
ttgaaagatatgtagatccttatacagaaaaaacacgaaaaaaatctacaacacttacaa
gtaattcaccacaagcgtggaaaaaagctcagaaaattctagataaaaaaattaaagaag
cactcgaaaattacaataaatcagatatcacttttggtgagctgtataaagaatggtatg
aatattataagcagcatgttaaacgtactagctatttgaaggttccaatgatgatgaaac
atgtttctaagcacataagcgatgatacaatcgttagaaacattgatgagacactcatta
ataagatgattgaagatatgtacacttttggtgatctctcactgaactacacaaagcaaa
caaaaacaactctatccgttatgctaaactatgcaattgatagaaaatacattcaaagaa
accctgctctagcagttaaaatccatcctaaaaaagtggaagaagaaaaaagaaagcttt
ctatggataaaaaatatctggagaaagaagaaattgatcaaatactgaaacagttatatt
ccaatcctcgcagaaaactacacggcataatagctgaatttctatatttgactggtttga
gatatggggaattgctagctttgcaaatgaaggactatgaggatgggaaaatttccatta
atgggaccttagattacacatctgtgaaaatggataatgctataaaaacaactccaaaaa
atacttattcgcaacgtgaagtgcaattacccaatcgtgcaaaagaattgattgaaagtg
tgatagctgacaatattcttgcaggtagacccacagatcccgatcaatatatatttatat
ctacaagtggcactccgcttacgctgcactcatttaacgctatactccataaagtagagg
aagagttggaattagaaaaaagtctatcctcacatatattcagacatagccacgtttcac
tattatctgaattaggcgtacctcttaaagccattatggagcgtgtagggcattctgatg
caaacacaactctgtctatttataaccatgtaacaaaaagagccaaacaacaagtaattg
ataaactaaatagcctttgatatttttgccccttctttgccccttttgcttaaaataaaa
caaaaaaagaagaaagaaccctgttaaaatagggttctttcttaattactacatcatacc
gcccatcattgatggatccattgcaggagctgctggcgctgctggttctggtttatctgc
aacgactgcttctgtcgttaataacaaggcagaaacggaagcggcattttgcaaggcaga
acgtgttactttagttgggtctacgatacctgcttcaaccatgtttacccattctccagt
agcagcattgaaaccagtgcctagttccacgttcttcaatttatcaacaatcactgatcc
ttcataaccagcgttttcagcgatttgacgaattggttcttctaaagcacgaacaacgat
cttgatacctgttgccacgtctccttctgcttctacagcagaaactttgctgataacgtt
cactagagctgtaccaccacctgagaccattccttcttct

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  Functional Coupling


Score	Peg	Function
4	fig\|1155766.14.peg.2501	Helix-turn-helix motif

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