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SEED version cvs.1555556707 (3/17/2019 22:5:7) on gum.mcs.anl.gov
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Protein fig|1155766.14.peg.2472: Enterococcus faecium Aus0004

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NCBI Taxonomy Id: 1155766

Current Assignment: Phage terminase large subunit
Translate Function Assignments


Context on contig NC_017022 from base 2412930 to 2424994 (12065 bp)

Fid Start End Size
(nt)		   Gap Find
best
clusters		 Pins Fc-sc SS Ev Function Aliases
2464 2413334 2412930 405 -           FIG00627453: hypothetical protein locus|EFAU004_02373, protein_id|YP_005355574.1, gi|383329690, geneID|11955759
2465 2413728 2413327 402 - -8         FIG00632320: hypothetical protein locus|EFAU004_02374, protein_id|YP_005355575.1, gi|383329691, geneID|11955760
2466 2414071 2413718 354 - -11         FIG00629412: hypothetical protein locus|EFAU004_02375, protein_id|YP_005355576.1, gi|383329692, geneID|11955761
2467 2414372 2414061 312 - -11         FIG00627895: hypothetical protein locus|EFAU004_02376, protein_id|YP_005355577.1, gi|383329693, geneID|11955762
2468 2415244 2414369 876 - -4         Phage protein locus|EFAU004_02377, protein_id|YP_005355578.1, gi|383329694, geneID|11955763
2469 2416414 2415254 1161 - 9 12     major capsid protein b locus|EFAU004_02378, protein_id|YP_005355579.1, gi|383329695, geneID|11955764
2470 2417100 2416414 687 - -1 30     Prophage Clp protease-like protein locus|EFAU004_02379, protein_id|YP_005355580.1, gi|383329696, geneID|11955765
2471 2418241 2417063 1179 - -38 13     Portal protein, phage associated locus|EFAU004_02380, protein_id|YP_005355581.1, gi|383329697, geneID|11955766
2472 2419955 2418261 1695 - 19       Phage terminase large subunit locus|EFAU004_02381, protein_id|YP_005355582.1, gi|383329698, geneID|11955767
2473 2420247 2419933 315 - -23         hypothetical protein locus|EFAU004_02382, protein_id|YP_005355583.1, gi|383329699, geneID|11955768
2474 2420631 2420350 282 - 102         FIG00627340: hypothetical protein locus|EFAU004_02383, protein_id|YP_005355584.1, gi|383329700, geneID|11955769
2475 2422305 2421889 417 - 1257         Phage transcriptional activator ArpU locus|EFAU004_02386, protein_id|YP_005355587.1, gi|383329703, geneID|11955772
2476 2422513 2422382 132 - 76         hypothetical protein locus|EFAU004_02387, protein_id|YP_005355588.1, gi|383329704, geneID|11955773
2477 2422646 2422503 144 - -11         hypothetical protein locus|EFAU004_02388, protein_id|YP_005355589.1, gi|383329705, geneID|11955774
2478 2422960 2422643 318 - -4         FIG00631129: hypothetical protein locus|EFAU004_02389, protein_id|YP_005355590.1, gi|383329706, geneID|11955775
2479 2423160 2422957 204 - -4         FIG00630572: hypothetical protein locus|EFAU004_02390, protein_id|YP_005355591.1, gi|383329707, geneID|11955776
2480 2424024 2423851 174 - 690         hypothetical protein locus|EFAU004_02393, protein_id|YP_005355594.1, gi|383329710, geneID|11955779
2481 2424581 2424021 561 - -4         conserved hypothetical protein - phage associated locus|EFAU004_02394, protein_id|YP_005355595.1, gi|383329711, geneID|11955780
2482 2424994 2424578 417 - -4         FIG00631830: hypothetical protein locus|EFAU004_02395, protein_id|YP_005355596.1, gi|383329712, geneID|11955781

Annotation History   /   View All Related Annotations Help on Annotations


  Subsystems in Which This Protein Plays a Role

This PEG is currently not present in any subsytem.

  Protein Sequence

>fig|1155766.14.peg.2472 Phage terminase large subunit
MNQFLSYKHIENWFKAIEEGTIKVCKEQLLLKNYLEERVFTREDIYFDKQMVEDSINIPA
QYFPFELIPWEKFLQCFIYGVRWKKDKTLVFNRYLSLMGRGNGKTGFASWNNFFLLTAKH
GIKNYDIDIYANNESQAKTSFDDVFKVIKDHPDLDKKVFKATKEVIQNIATNSKLRYNTA
NARTKDGKRPGANRFDEIHENEDYSMINVATSGGGKIRDYREFYDTTNGHVRGGPLDDII
EESKMILSGELGIDKDGAEFSSLFPFICRLDNDNEVDDPDMWEKACPTINYNADLKRKMF
QEYSQMQRNAGLRLTFMTKRMNRPMEDTRFAVASYDDVLHTKEKEFPEKMDEVIGTVDFA
DRRDFASVGLLGKYDKDVYFTQHTFIHESALRLQNIKREVIDISIDQGKSQIVHGKNIEA
DYIVGWFLEMSNKYYIKKIAMDMYRAKILKPALEEAGFTVEIVRSGSVTHGMLKDLVDDL
FINQRLFFGDDAIMRWYCMNVYEEHISNGNIRYEKIEPETRKTDGFFSFLHGLNFLDDIY
DSAPVTVTNSSVENTGTGFTPLVF

MD5 = bf7a16caa975b9406e36b75934fafc4e


  DNA Sequence

>fig|1155766.14.peg.2472 Phage terminase large subunit
atgaatcaattcctgagttataagcatattgaaaattggttcaaagctatagaagaaggc
actatcaaggtatgcaaagagcaattattgctaaaaaattatctagaagaaagagtcttt
actagagaagatatttacttcgataagcagatggtagaggattcaatcaatataccagca
caatactttccattcgaattaattccgtgggaaaaatttctacaatgttttatttatggt
gttcgatggaaaaaagataaaacactagtgttcaatagatatctttcattaatgggacgt
ggtaatggtaaaactggttttgcttcttggaacaacttctttctactaaccgctaaacac
ggtattaaaaattatgatattgatatctatgccaataatgaaagccaagcaaagactagt
tttgatgatgtatttaaagtaattaaagatcatcctgatttagataaaaaagtatttaaa
gctacgaaggaagttattcaaaatatcgctacaaacagcaaacttcgttataacacggca
aatgctagaacaaaagatgggaagcgaccaggtgcaaaccgctttgatgaaattcacgaa
aatgaagattattcaatgataaatgtggctacttctggtggtggtaaaattcgagattat
agagaattttatgatacaactaatggtcatgttcgtggtggtccgcttgatgacattata
gaagaatcaaaaatgattctttctggagaacttggaattgacaaggatggagcagaattt
tctagtttgtttccatttatttgtcgcttggataacgataatgaagttgatgatcccgac
atgtgggaaaaagcttgtccaactattaattacaatgcagatttaaaacggaaaatgttt
caagaatactctcaaatgcaacgtaatgctggtttaagacttacgttcatgaccaaacga
atgaacagacctatggaagatacacgatttgctgttgcttcatatgatgatgttctgcat
acgaaagaaaaagaatttcctgaaaaaatggatgaagtgataggaacagtcgattttgct
gatagacgagattttgccagcgttgggttgctaggaaaatacgataaagatgtttatttt
acacaacatacttttatccacgaatcagcccttcgattacaaaacatcaaacgagaggtt
atagatatttctatagatcaaggaaaatcacagatcgttcatggaaaaaatatagaagct
gattatattgtaggttggtttcttgaaatgagtaataaatattatattaaaaaaatcgct
atggatatgtaccgtgcaaaaatattgaagcccgctttagaagaagcaggttttactgtg
gaaattgttcgaagcggatctgttacacatggtatgttaaaagatctggttgatgacctt
tttattaatcaacgtttattttttggtgacgatgcgattatgcgttggtattgcatgaat
gtatatgaagagcatatttctaatggaaatatacgctatgaaaaaatagaacctgaaact
agaaaaacggatggctttttttcattccttcatggtttgaattttttagatgatatttat
gattctgctcctgtaacagtcacaaatagctcagtagaaaatacaggaactggatttact
cctctagtattctaa


  DNA with Flanking Sequence

>fig|1155766.14.peg.2472 Phage terminase large subunit
taaagataataacgtcgaaagaataaaaaatgtttttggatatagtattgaagagattaa
ttattacattgacttcgctgaagctttcattccgatggtgagataacccccccttaaaat
aaatcgcaaattttttgggggtgatgaaacggagggggctgtcaggaaaagagatttttt
cgaactttatcatgaaaggagggctaaaatgtttaaaaacgaattgtctcaaaatcgcta
cagagaaaaattacgccgctctttaataagccaattggaaagtcagaaaacaaatattga
gccattcttagataatgttgatcgttatatcagtttatgggaaacggcgatatcactgga
agaagatatatccgagaacggcattagactggagaatggtaaaaagaatgaatcagtagc
gttgcttgtttctgtcaacaaacaaatgggattgatgttggataaacttgccattactcc
tgaattggtaggtgaagcaaatgaatcaattcctgagttataagcatattgaaaattggt
tcaaagctatagaagaaggcactatcaaggtatgcaaagagcaattattgctaaaaaatt
atctagaagaaagagtctttactagagaagatatttacttcgataagcagatggtagagg
attcaatcaatataccagcacaatactttccattcgaattaattccgtgggaaaaatttc
tacaatgttttatttatggtgttcgatggaaaaaagataaaacactagtgttcaatagat
atctttcattaatgggacgtggtaatggtaaaactggttttgcttcttggaacaacttct
ttctactaaccgctaaacacggtattaaaaattatgatattgatatctatgccaataatg
aaagccaagcaaagactagttttgatgatgtatttaaagtaattaaagatcatcctgatt
tagataaaaaagtatttaaagctacgaaggaagttattcaaaatatcgctacaaacagca
aacttcgttataacacggcaaatgctagaacaaaagatgggaagcgaccaggtgcaaacc
gctttgatgaaattcacgaaaatgaagattattcaatgataaatgtggctacttctggtg
gtggtaaaattcgagattatagagaattttatgatacaactaatggtcatgttcgtggtg
gtccgcttgatgacattatagaagaatcaaaaatgattctttctggagaacttggaattg
acaaggatggagcagaattttctagtttgtttccatttatttgtcgcttggataacgata
atgaagttgatgatcccgacatgtgggaaaaagcttgtccaactattaattacaatgcag
atttaaaacggaaaatgtttcaagaatactctcaaatgcaacgtaatgctggtttaagac
ttacgttcatgaccaaacgaatgaacagacctatggaagatacacgatttgctgttgctt
catatgatgatgttctgcatacgaaagaaaaagaatttcctgaaaaaatggatgaagtga
taggaacagtcgattttgctgatagacgagattttgccagcgttgggttgctaggaaaat
acgataaagatgtttattttacacaacatacttttatccacgaatcagcccttcgattac
aaaacatcaaacgagaggttatagatatttctatagatcaaggaaaatcacagatcgttc
atggaaaaaatatagaagctgattatattgtaggttggtttcttgaaatgagtaataaat
attatattaaaaaaatcgctatggatatgtaccgtgcaaaaatattgaagcccgctttag
aagaagcaggttttactgtggaaattgttcgaagcggatctgttacacatggtatgttaa
aagatctggttgatgacctttttattaatcaacgtttattttttggtgacgatgcgatta
tgcgttggtattgcatgaatgtatatgaagagcatatttctaatggaaatatacgctatg
aaaaaatagaacctgaaactagaaaaacggatggctttttttcattccttcatggtttga
attttttagatgatatttatgattctgctcctgtaacagtcacaaatagctcagtagaaa
atacaggaactggatttactcctctagtattctaacttgaaaggaggtgagaaagtgggg
atttttcaaaaggcggtaggatacttcacaaaaaaagcaacggttcctttagaagaatac
ttttgtaaattgcaagttgattttgtgtatcgaaaatttgcgattgaaacttgtattgat
ttgattgcaaatgcgatgagtaaagcggaattcaagtcatatgaagatggaaaaaataaa
aagaatgatctttactataggctgaatgtagctcctaataagaaaaataatgcaacagaa
tttagaaaaaaactgatcaggagattaatattctacaatgaagtattgatcgtttctccg
tctaataattctagcgaaatatttattgcggatagttgggatgtcacagaatatgcattg
aaagatgatgtgttttctcaagtgcaaattaacaacatagtccttgatagagaatttcta
gaaagtgatgttatctatataaaatacgcagatcaacaaattaggcaactagtcg


  Assignments for Essentially Identical Proteins

No essentially identical proteins found

  Links to Related Entries in Other Sites

This PEG has no links.
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  Functional Coupling

Score Peg Function
12 fig|1155766.14.peg.2469 major capsid protein b
30 fig|1155766.14.peg.2470 Prophage Clp protease-like protein
13 fig|1155766.14.peg.2471 Portal protein, phage associated


  Attributes

Help on Attributes

Key
Link Explains Key		 Value


  Protein Families

No protein families found

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