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SEED version cvs.1555556707 (3/17/2019 22:5:7) on aspen.cels.anl.gov
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Protein fig|1155766.14.peg.2470: Enterococcus faecium Aus0004

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NCBI Taxonomy Id: 1155766

Current Assignment: Prophage Clp protease-like protein
Translate Function Assignments


Context on contig NC_017022 from base 2409209 to 2422305 (13097 bp)

Fid Start End Size
(nt)		   Gap Find
best
clusters		 Pins Fc-sc SS Ev Function Aliases
2460 2411725 2409209 2517 -   11     Phage tail length tape-measure protein locus|EFAU004_02370, protein_id|YP_005355571.1, gi|383329687, geneID|11955756
2461 2411925 2411743 183 - 17         FIG00630712: hypothetical protein  
2462 2412161 2411928 234 - 2         FIG00631641: hypothetical protein locus|EFAU004_02371, protein_id|YP_005355572.1, gi|383329688, geneID|11955757
2463 2412918 2412337 582 - 175         FIG00632609: hypothetical protein locus|EFAU004_02372, protein_id|YP_005355573.1, gi|383329689, geneID|11955758
2464 2413334 2412930 405 - 11         FIG00627453: hypothetical protein locus|EFAU004_02373, protein_id|YP_005355574.1, gi|383329690, geneID|11955759
2465 2413728 2413327 402 - -8         FIG00632320: hypothetical protein locus|EFAU004_02374, protein_id|YP_005355575.1, gi|383329691, geneID|11955760
2466 2414071 2413718 354 - -11         FIG00629412: hypothetical protein locus|EFAU004_02375, protein_id|YP_005355576.1, gi|383329692, geneID|11955761
2467 2414372 2414061 312 - -11         FIG00627895: hypothetical protein locus|EFAU004_02376, protein_id|YP_005355577.1, gi|383329693, geneID|11955762
2468 2415244 2414369 876 - -4         Phage protein locus|EFAU004_02377, protein_id|YP_005355578.1, gi|383329694, geneID|11955763
2469 2416414 2415254 1161 - 9 10     major capsid protein b locus|EFAU004_02378, protein_id|YP_005355579.1, gi|383329695, geneID|11955764
2470 2417100 2416414 687 - -1       Prophage Clp protease-like protein locus|EFAU004_02379, protein_id|YP_005355580.1, gi|383329696, geneID|11955765
2471 2418241 2417063 1179 - -38         Portal protein, phage associated locus|EFAU004_02380, protein_id|YP_005355581.1, gi|383329697, geneID|11955766
2472 2419955 2418261 1695 - 19 10     Phage terminase large subunit locus|EFAU004_02381, protein_id|YP_005355582.1, gi|383329698, geneID|11955767
2473 2420247 2419933 315 - -23         hypothetical protein locus|EFAU004_02382, protein_id|YP_005355583.1, gi|383329699, geneID|11955768
2474 2420631 2420350 282 - 102         FIG00627340: hypothetical protein locus|EFAU004_02383, protein_id|YP_005355584.1, gi|383329700, geneID|11955769
2475 2422305 2421889 417 - 1257         Phage transcriptional activator ArpU locus|EFAU004_02386, protein_id|YP_005355587.1, gi|383329703, geneID|11955772

Annotation History   /   View All Related Annotations Help on Annotations


  Subsystems in Which This Protein Plays a Role

This PEG is currently not present in any subsytem.

  Protein Sequence

>fig|1155766.14.peg.2470 Prophage Clp protease-like protein
MTTMKTFLAVKNEGAVPQIFIQGFIGSSWFFEGNTDKGIKNILDSLGDQEEIEVVINSNG
GDVFQGIAIGNLLKSNKAKVNVVINGLAASAASIIAMAGDTIKIYNNAQLMIHRASTYGE
GNVDDFRTIADQLESIDKSVKASYKTRFNGTDEALQELLEKESFMDAETALSYGLVDEII
DAENSSGTEAKKEQSVEEILNDVKEKRAEKIAAFTAALNKTFGQGDVK

MD5 = 54ceeef9606dd6762fe61565bdff995c


  DNA Sequence

>fig|1155766.14.peg.2470 Prophage Clp protease-like protein
atgacgacaatgaaaacatttctagcagtaaagaatgaaggcgcagtaccgcaaattttt
attcagggatttattggttctagttggttctttgaagggaatactgacaagggaatcaaa
aatattttggatagtctaggtgatcaagaagaaattgaagtagtaattaattcaaacggt
ggagacgtatttcaagggattgctattgggaacttacttaagtcaaataaagcaaaagtt
aacgttgtgattaacggcttagccgctagtgctgcttcaattatcgcaatggctggcgat
actataaaaatctacaacaatgcacaattgatgattcaccgcgcttccacatacggagaa
ggaaatgtcgatgacttccgtacgattgctgaccaactggaatcaattgataaatcggta
aaggcttcatataaaacacgattcaatggcacagatgaagcattgcaagaacttcttgaa
aaagaatcgtttatggatgcagaaacagctttgagttatggattggtcgatgaaattatc
gatgcagaaaatagctcaggtactgaagctaaaaaagaacaaagcgttgaagaaattttg
aatgacgttaaagaaaaaagagcagaaaaaattgctgcatttacagcagcattaaataaa
acatttggacaaggagatgtaaaataa


  DNA with Flanking Sequence

>fig|1155766.14.peg.2470 Prophage Clp protease-like protein
ttttatggaagctgataatgcaggtgcggtatttcaattacaaaatgagtacacattaga
agatttcagcggaaacttccaaagcaattcaagagatataaaaaacttaatagacgacat
ctttgagatgacagcagcagcgtttcacgttccgaaaaacctactaaagggagacatgag
tgggttatcggatcaagtggacgcttttttaatgttcgaaatcataccgattgctgaact
tattcaggatgcgtttaacgctagtctctatgaagtagaagaatacttgtcagggaattt
tgtacgtgtggatacaactatgatcaagattactagcttcaaagatttggttgacgctat
tgatgtaggcattagaaatggagtatttacaatcaacgaaggaagagaacgcgttggaaa
tgatcgctctgataaggcgatggcagatgaaatatttataactaaaaacaatcaacaagt
atcgaaaggaggtgaggcgaatgacgacaatgaaaacatttctagcagtaaagaatgaag
gcgcagtaccgcaaatttttattcagggatttattggttctagttggttctttgaaggga
atactgacaagggaatcaaaaatattttggatagtctaggtgatcaagaagaaattgaag
tagtaattaattcaaacggtggagacgtatttcaagggattgctattgggaacttactta
agtcaaataaagcaaaagttaacgttgtgattaacggcttagccgctagtgctgcttcaa
ttatcgcaatggctggcgatactataaaaatctacaacaatgcacaattgatgattcacc
gcgcttccacatacggagaaggaaatgtcgatgacttccgtacgattgctgaccaactgg
aatcaattgataaatcggtaaaggcttcatataaaacacgattcaatggcacagatgaag
cattgcaagaacttcttgaaaaagaatcgtttatggatgcagaaacagctttgagttatg
gattggtcgatgaaattatcgatgcagaaaatagctcaggtactgaagctaaaaaagaac
aaagcgttgaagaaattttgaatgacgttaaagaaaaaagagcagaaaaaattgctgcat
ttacagcagcattaaataaaacatttggacaaggagatgtaaaataatgacagttaaaaa
tttaaaaggtgtaacagctgcaagcgaccaattgatgaaagcttttaaagatggtaacga
agaatcttttagcgcagctatggtaagcttatctaaggaaattcaggataaaattttaga
agaagcaacagcaaaaaatcaagatcaattagtattaatgaaccgtggtcagcgtgtatt
aactacacaagaaacaaaattctataacgaagtagtgaaaaacgaaggttttgcaggggt
cgaagaattagtgccagctactgtatttgaacgtgtatttgaagatttagaacaatctca
tccactattgcaaaaaattacttttgttaacacaactggtgtaacagaatggattgtgtc
acgtggagtcaatccagcatggtggggtaaactttgcgaagctgttaaaaaagttttaga
taatggctttgatgtaattaacatgaagcagttcaagctatcaggttatattcctgtatg
taaggca


  Assignments for Essentially Identical Proteins

No essentially identical proteins found

  Links to Related Entries in Other Sites

This PEG has no links.
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  Functional Coupling

Score Peg Function
11 fig|1155766.14.peg.2460 Phage tail length tape-measure protein
10 fig|1155766.14.peg.2469 major capsid protein b
10 fig|1155766.14.peg.2472 Phage terminase large subunit


  Attributes

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  Protein Families

No protein families found

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