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SEED version cvs.1555556707 (3/17/2019 22:5:7) on gum.mcs.anl.gov
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Protein fig|1125636.3.peg.4305: Escherichia coli 2854350

This feature in The SEED Viewer

NCBI Taxonomy Id: 1125636

Current Assignment: MG(2+) CHELATASE FAMILY PROTEIN / ComM-related protein
Translate Function Assignments



Context on contig APZL01000139 from base 87 to 8717 (8631 bp)

Fid Start End Size
(nt)
  Gap Find
best
clusters
Pins Fc-sc SS Ev Function Aliases
rna.107 87 206 120 +           5S RNA  
rna.108 259 332 74 + 52         tRNA-Asp-GTC  
rna.109 344 416 73 + 11         tRNA-Trp-CCA  
4303 1354 515 840 - 98         HTH-type transcriptional regulator hdfR locus|EC2854350_4132, protein_id|END37814.1, gi|477055050
4304 1473 1811 339 + 118         UPF0438 protein YifE locus|EC2854350_4133, protein_id|END37815.1, gi|477055051
4305 3356 1836 1521 - 24         MG(2+) CHELATASE FAMILY PROTEIN / ComM-related protein locus|EC2854350_4134, protein_id|END37816.1, gi|477055052
4306 3947 5593 1647 + 590     1: 1   Acetolactate synthase large subunit (EC 2.2.1.6) locus|EC2854350_4135, protein_id|END37817.1, gi|477055053
4307 5590 5853 264 + -4     1: 1 dlit(3550695) Acetolactate synthase small subunit (EC 2.2.1.6) gene_name|ilvM, locus|EC2854350_4136, protein_id|END37818.1, gi|477055054
4308 5873 6802 930 + 19     2: 2 1 dlit(9163511)
dlit(3550695)
dlit(3897211)
dlit(3069843)
Branched-chain amino acid aminotransferase (EC 2.6.1.42) gene_name|ilvE, locus|EC2854350_4137, protein_id|END37819.1, gi|477055055
4309 6867 8717 1851 + 64     1: 1   Dihydroxy-acid dehydratase (EC 4.2.1.9) gene_name|ilvD, locus|EC2854350_4138, protein_id|END37820.1, gi|477055056

Annotation History   /   View All Related Annotations Help on Annotations



  Subsystems in Which This Protein Plays a Role

This PEG is currently not present in any subsytem.

  Protein Sequence

>fig|1125636.3.peg.4305 MG(2+) CHELATASE FAMILY PROTEIN / ComM-related protein
MSLSIVHTRAALGVNAPPITVEVHISKGLPGLTMVGLPETTVKEARDRVRSAIINSGYEY
PAKKITINLAPADLPKEGGRYDLPIAIALLAASEQLTANKLDEYELVGELALTGALRGVP
GAISSATEAIKSGRKIIVVKDNEDEVGLINGEGCLIADHLQAVCAFLEGKHALERPKPTD
AVSRALQHDLSDVVGQEQGKRGLEITAAGGHNLLLIGPPGTGKTMLASRINGLLPDLSNE
EALESAAILSLVNAESVQKQWRQRPFRSPHHSASLTAMVGGGAIPGPGEISLAHNGVLFL
DELPEFERRTLDALREPIESGQIHLSRTRAKITYPARFQLVAAMNPSPTGHYQGNHNRCT
PEQTLRYLNRLSGPFLDRFDLSLEIPLPPPGILSKTVVPGESSATVKQRVMAARERQFKR
QNKLNAWLDSPEIRQFCKLESEDAMWLEGTLIHLGLSIRAWQRLLKVARTIADIDQSDII
TRQHLQEAVSYRAIDRLLIHLQKLLT

MD5 = 8ae20adfe28758cbcd9a264ba11e4130


  DNA Sequence

>fig|1125636.3.peg.4305 MG(2+) CHELATASE FAMILY PROTEIN / ComM-related protein
atgtcactgtcaattgttcatacccgcgcagccctgggagtaaatgcgcccccgatcact
gttgaggtacatatcagtaaaggtctacccggcttaacgatggtaggcttaccagaaaca
actgtaaaagaagctcgcgatcgcgtgcgcagcgccattatcaatagcggatatgaatat
ccggcgaaaaaaatcaccatcaaccttgctccagccgatctgccaaaagaagggggacga
tatgatttacctatcgccattgcgttgctggcggcctcagaacagcttacagccaataag
ttagatgaatatgaattagtcggagaactggctcttacaggcgctctgcgtggcgttccc
ggtgcaatctccagtgcaactgaagctattaagtcgggcagaaaaattatcgtcgtgaaa
gataacgaagatgaagtggggctaattaacggtgaaggatgcctgatagccgatcatctg
caagctgtctgtgcgtttctggaaggtaagcacgctctcgaacgcccgaaaccaactgat
gcagtatcccgggcgctacaacatgatctcagtgatgttgtcggtcaggaacaaggaaag
cgaggactggaaattaccgccgctggcgggcacaaccttttactgattgggccgccggga
acaggtaaaacaatgctcgccagccgtattaatggcctgttgccagatttaagcaatgaa
gaggcactggagagcgctgcgatattaagtctggtaaatgctgagtcagtacaaaaacaa
tggcggcagcgcccgttccgctcacctcatcacagtgcgtcgttaactgcgatggtgggc
ggtggtgcaattccagggccaggtgaaatttcgctggcgcataacggcgtgctttttctt
gatgagttacctgaatttgaacggcgtacactggatgccttgcgagagccgattgaatcc
gggcagatccatctttcacgcacgcgagcaaaaataacctatccagcccgtttccagctt
gttgcggcgatgaatcccagccctaccggacattatcagggaaaccataaccgctgcacg
ccagaacagacattacgttatctcaaccggctctcggggccctttctcgaccgcttcgat
ctctcactggagatcccattaccaccccccggcattttgagtaaaacggtagtgccggga
gaaagcagcgccaccgttaaacaacgcgtaatggccgccagagagcgccaatttaagcgg
cagaataaactgaatgcctggctggatagtccggaaatacgccaattctgcaaacttgag
agcgaagatgcgatgtggttggaaggaacactgatccatctggggttatcgattcgtgcc
tggcagcggttattgaaagttgcacgaaccattgctgatattgatcagtctgacattatc
acacgtcagcatttgcaggaggcagttagctatcgtgcgattgaccgtttgctcatccat
ctgcaaaaactactgacataa


  DNA with Flanking Sequence

>fig|1125636.3.peg.4305 MG(2+) CHELATASE FAMILY PROTEIN / ComM-related protein
acccccggacctttcggtgcgggggtcttagttcgttaaggcttgatctctaagcctttc
ctcgtccaagtgcagccccgcacggtgggataataatcaccaccacgctaatcacgacca
ggctaatcactcgtagaagggctgtcattttgtcttttcttgcatcttgttcgaaggaat
gcctaaagagttaccatagattttgcgaatagcacaagatatttttgggcctatttttat
gatggctttaataatttcaatagaaattgttgttttttaaaaagaaaatagtgagtgaaa
aaaattcaatttcagtataaatgttgttcccttcctcgtagttcatcctttgtccgctgc
atttttgcgagcatcattccaccgccagaacaactcaacttcacttgcacaaataaacag
gaatcagccactaaaattcacgaattagcgggctacagcagcgatatcttatgcacataa
tggtgactcaaggagggcttatgtcactgtcaattgttcatacccgcgcagccctgggag
taaatgcgcccccgatcactgttgaggtacatatcagtaaaggtctacccggcttaacga
tggtaggcttaccagaaacaactgtaaaagaagctcgcgatcgcgtgcgcagcgccatta
tcaatagcggatatgaatatccggcgaaaaaaatcaccatcaaccttgctccagccgatc
tgccaaaagaagggggacgatatgatttacctatcgccattgcgttgctggcggcctcag
aacagcttacagccaataagttagatgaatatgaattagtcggagaactggctcttacag
gcgctctgcgtggcgttcccggtgcaatctccagtgcaactgaagctattaagtcgggca
gaaaaattatcgtcgtgaaagataacgaagatgaagtggggctaattaacggtgaaggat
gcctgatagccgatcatctgcaagctgtctgtgcgtttctggaaggtaagcacgctctcg
aacgcccgaaaccaactgatgcagtatcccgggcgctacaacatgatctcagtgatgttg
tcggtcaggaacaaggaaagcgaggactggaaattaccgccgctggcgggcacaaccttt
tactgattgggccgccgggaacaggtaaaacaatgctcgccagccgtattaatggcctgt
tgccagatttaagcaatgaagaggcactggagagcgctgcgatattaagtctggtaaatg
ctgagtcagtacaaaaacaatggcggcagcgcccgttccgctcacctcatcacagtgcgt
cgttaactgcgatggtgggcggtggtgcaattccagggccaggtgaaatttcgctggcgc
ataacggcgtgctttttcttgatgagttacctgaatttgaacggcgtacactggatgcct
tgcgagagccgattgaatccgggcagatccatctttcacgcacgcgagcaaaaataacct
atccagcccgtttccagcttgttgcggcgatgaatcccagccctaccggacattatcagg
gaaaccataaccgctgcacgccagaacagacattacgttatctcaaccggctctcggggc
cctttctcgaccgcttcgatctctcactggagatcccattaccaccccccggcattttga
gtaaaacggtagtgccgggagaaagcagcgccaccgttaaacaacgcgtaatggccgcca
gagagcgccaatttaagcggcagaataaactgaatgcctggctggatagtccggaaatac
gccaattctgcaaacttgagagcgaagatgcgatgtggttggaaggaacactgatccatc
tggggttatcgattcgtgcctggcagcggttattgaaagttgcacgaaccattgctgata
ttgatcagtctgacattatcacacgtcagcatttgcaggaggcagttagctatcgtgcga
ttgaccgtttgctcatccatctgcaaaaactactgacataaaaaaagggcatttcgccct
ttttattaatcatcagaatcggtgtagtcttcagcaccttcaacctgcggtttaccgccg
gaaagggtgtgaaaacgttttggacgcttaatacgcgtcatatacttggaccacacgcgt
tctgcttctgtcactggctcacgttcgccacggcatactgctacgaagagtttctcttcc
tcggtaaccggctcgcgtttgccaagatccaactcattgaaggcataaccatgacgctca
agcagttgtgcctctttgatggtgaaatcaccatgacgagagaatccacgtggataatgt
ttattgtcgaaatatcgattagtcgtcgtaaagctttccgccatcctgcacgctcctaat
tctttgaccgagctagttatggcgcggagtattagttacgcttgacagagtgtaaaacaa
aacatttaaatcataacgacaaataattttgcggagagcactgtggatacggaattgtta
a


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  Attributes

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  Protein Families

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