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SEED version cvs.1555556707 (3/17/2019 22:5:7) on gum.mcs.anl.gov
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Protein fig|1116050.3.peg.3555: Escherichia coli P0299917.4

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NCBI Taxonomy Id: 1116050

Current Assignment: Threonine catabolic operon transcriptional activator TdcR
Translate Function Assignments



Context on contig APYN01000064 from base 119425 to 127892 (8468 bp)

Fid Start End Size
(nt)
  Gap Find
best
clusters
Pins Fc-sc SS Ev Function Aliases
3550 121719 119425 2295 -           2-ketobutyrate formate-lyase (EC 2.3.1.-) / Pyruvate formate-lyase (EC 2.3.1.54) locus|ECP02999174_3618, protein_id|ENC53855.1, gi|476966127
3551 122961 121753 1209 - 33         Acetate kinase (EC 2.7.2.1) @ Propionate kinase (EC 2.7.2.15) locus|ECP02999174_3619, protein_id|ENC53856.1, gi|476966128
3552 124318 122987 1332 - 25         L-threonine transporter, anaerobically inducible locus|ECP02999174_3620, protein_id|ENC53857.1, gi|476966129
3553 125329 124340 990 - 21     1: 1 dlit(9484901) Threonine dehydratase, catabolic (EC 4.3.1.19) @ L-serine dehydratase, (PLP)-dependent (EC 4.3.1.17) locus|ECP02999174_3621, protein_id|ENC53858.1, gi|476966130
3554 126366 125428 939 - 98       dlit(9484901) Threonine catabolic operon transcriptional activator TdcA locus|ECP02999174_3622, protein_id|ENC53859.1, gi|476966131
3555 126555 126899 345 + 188         Threonine catabolic operon transcriptional activator TdcR locus|ECP02999174_3623, protein_id|ENC53860.1, gi|476966132
3556 127155 127694 540 + 255         orf, hypothetical protein locus|ECP02999174_3624, protein_id|ENC53861.1, gi|476966133
3557 127716 127892 177 + 21         hypothetical protein locus|ECP02999174_3625, protein_id|ENC53862.1, gi|476966134

Annotation History   /   View All Related Annotations Help on Annotations



  Subsystems in Which This Protein Plays a Role

This PEG is currently not present in any subsytem.

  Protein Sequence

>fig|1116050.3.peg.3555 Threonine catabolic operon transcriptional activator TdcR
MTGITIFYGDNIIRYVVNIKKGLRPYFKQLPDNYQAKFELNLMSKFSNFIINKPFSAINT
AARHIFSRYLLENKHLFYQYFKISNTGIDHLEQLINVNFFSSDRTSFCECNRFP

MD5 = 552d3383fbd1a24645da97abbdf32504


  DNA Sequence

>fig|1116050.3.peg.3555 Threonine catabolic operon transcriptional activator TdcR
atgacggggataaccatattttatggcgataacatcattcgttatgtggttaatataaaa
aaggggctgagaccatatttcaagcaattaccggataattaccaggcaaaatttgagtta
aatttaatgagcaagttctcaaattttattataaataaaccattttcagcgataaatact
gcggcacgtcacattttttcacgctatttgttggagaacaaacatttattttatcaatat
tttaaaatttcgaatacaggtattgatcatctcgaacaattgattaacgtcaactttttc
tcttctgacaggacgtcattttgtgaatgcaatcgttttccataa


  DNA with Flanking Sequence

>fig|1116050.3.peg.3555 Threonine catabolic operon transcriptional activator TdcR
aggaaaaccaaatgagacttccaccaccgcctcagaagacataccgcttatctcattaac
catatttttcatttcacgggtaatggattcggaacgggagagtaacaattgaccggcagg
tgttaatgttacaccggtatttttccgcaccactaattccacaccaaaataatcttcaat
atcgttaatgattttactgacggctggttgagttaaccctaattcttttgcagccgagcc
gatagagccacttctaatgacttcctgaaagactaccaggtgctgcgttttcggaagaag
aatagtgctcataacgacctacgttaattacctcattgacggcatgaagtgtatcaaaat
gaaatgaacaggatatgtgcgaccactcacaaattaactttcaatactttccatggtatc
gttacgcaaattaaatacctttaaatatcaacaagttaaagtataaaaatcagcataaac
cctgatttttgtcaaaaaaaatgacggggataaccatattttatggcgataacatcattc
gttatgtggttaatataaaaaaggggctgagaccatatttcaagcaattaccggataatt
accaggcaaaatttgagttaaatttaatgagcaagttctcaaattttattataaataaac
cattttcagcgataaatactgcggcacgtcacattttttcacgctatttgttggagaaca
aacatttattttatcaatattttaaaatttcgaatacaggtattgatcatctcgaacaat
tgattaacgtcaactttttctcttctgacaggacgtcattttgtgaatgcaatcgttttc
cataaattcttctcccctcataggcgacgaatagcattttgtgttgaggatcacaaaacg
aataattgctggtcgccgcgataaggtcagacgaagtcaacaagggggattttcactgtg
ctttacatcagcgtaggacacagaatgttgcttcgtttactgtaacgccgggtaaatgag
cgttttttgatagtgcgtaagtgtcgtgcgaggaaaataagcatctattattgtttgtca
tgacgacaaggcaggcatcaatgaaaggcttcccaattgcacatatttttcacccttcaa
tcccgccaatgcacgcagtggttaacaatcacaatagaaatattgattattggacggtaa
aaagaaagtttgcagaaattgtctccaccaatgacgttaataaaatttacagtataagta
atgaactgcggagagtattatctgcaattactgcattgaatttctatcaaggcgatgttc
cttctgtcatgatccgaatccaacc


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  Attributes

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  Protein Families

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