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SEED version cvs.1555556707 (3/17/2019 22:5:7) on gum.mcs.anl.gov
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Protein fig|1116050.3.peg.3554: Escherichia coli P0299917.4

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NCBI Taxonomy Id: 1116050

Current Assignment: Threonine catabolic operon transcriptional activator TdcA
Translate Function Assignments



Context on contig APYN01000064 from base 119425 to 127892 (8468 bp)

Fid Start End Size
(nt)
  Gap Find
best
clusters
Pins Fc-sc SS Ev Function Aliases
3550 121719 119425 2295 -           2-ketobutyrate formate-lyase (EC 2.3.1.-) / Pyruvate formate-lyase (EC 2.3.1.54) locus|ECP02999174_3618, protein_id|ENC53855.1, gi|476966127
3551 122961 121753 1209 - 33         Acetate kinase (EC 2.7.2.1) @ Propionate kinase (EC 2.7.2.15) locus|ECP02999174_3619, protein_id|ENC53856.1, gi|476966128
3552 124318 122987 1332 - 25         L-threonine transporter, anaerobically inducible locus|ECP02999174_3620, protein_id|ENC53857.1, gi|476966129
3553 125329 124340 990 - 21     1: 1 dlit(9484901) Threonine dehydratase, catabolic (EC 4.3.1.19) @ L-serine dehydratase, (PLP)-dependent (EC 4.3.1.17) locus|ECP02999174_3621, protein_id|ENC53858.1, gi|476966130
3554 126366 125428 939 - 98       dlit(9484901) Threonine catabolic operon transcriptional activator TdcA locus|ECP02999174_3622, protein_id|ENC53859.1, gi|476966131
3555 126555 126899 345 + 188         Threonine catabolic operon transcriptional activator TdcR locus|ECP02999174_3623, protein_id|ENC53860.1, gi|476966132
3556 127155 127694 540 + 255         orf, hypothetical protein locus|ECP02999174_3624, protein_id|ENC53861.1, gi|476966133
3557 127716 127892 177 + 21         hypothetical protein locus|ECP02999174_3625, protein_id|ENC53862.1, gi|476966134

Annotation History   /   View All Related Annotations Help on Annotations



  Subsystems in Which This Protein Plays a Role

This PEG is currently not present in any subsytem.

  Protein Sequence

>fig|1116050.3.peg.3554 Threonine catabolic operon transcriptional activator TdcA
MSTILLPKTQHLVVFQEVIRSGSIGSAAKELGLTQPAVSKIINDIEDYFGVELVVRKNTG
VTLTPAGQLLLSRSESITREMKNMVNEISGMSSEAVVEVSFGFPSLIGFTFMSGMINKFK
EVFPKAQVSMYEAQLSSFLPAIRDGRLDFAIGTLSAEMKLQDLHVEPLFESEFVLVASKS
RTCTGTTTLESLKNEQWVLPQTNMGYYSELLTTLQRNGISIENIVKTDSVVTIYNLVLNA
DFLTVIPCDMTSPFGSNQFITIPVEETLPVAQYAAVWSKNYRIKKAASVLVELAKEYSSY
NGCRRRQLIEVG

MD5 = 1a6ccd40122dc3fb213c88d147319706


  DNA Sequence

>fig|1116050.3.peg.3554 Threonine catabolic operon transcriptional activator TdcA
atgagcactattcttcttccgaaaacgcagcacctggtagtctttcaggaagtcattaga
agtggctctatcggctcggctgcaaaagaattagggttaactcaaccagccgtcagtaaa
atcattaacgatattgaagattattttggtgtggaattagtggtgcggaaaaataccggt
gtaacattaacacctgccggtcaattgttactctcccgttccgaatccattacccgtgaa
atgaaaaatatggttaatgagataagcggtatgtcttctgaggcggtggtggaagtctca
tttggttttccttcattgattggttttacttttatgtcagggatgatcaacaagttcaaa
gaggtgttcccgaaagcgcaggtttctatgtatgaagcgcaactgtcttcgttcttaccg
gcaatccgcgacggtcgactggattttgcgattggtacgttaagtgcagaaatgaagctt
caggatttacatgttgagccgctgttcgagtccgagtttgtgctggtagccagtaagtcc
cgaacatgcaccggcaccaccacgctggagtcgttgaagaacgaacagtgggtgttgcca
caaaccaatatggggtactacagcgagcttcttactacgttacaaagaaatggcatcagt
attgaaaacatcgttaaaaccgactcagtcgtgacaatttataatcttgttctcaatgct
gatttcttaactgtaattccttgtgatatgacgtcaccttttggttcaaatcaatttatt
actattccggttgaagaaacattacctgtggcacaatatgccgcggtatggtcgaaaaat
tatcgtattaaaaaagcagcatcggttttggtggaattagccaaagagtattcatcttat
aatgggtgtagacgaaggcaattaatagaagttggttag


  DNA with Flanking Sequence

>fig|1116050.3.peg.3554 Threonine catabolic operon transcriptional activator TdcA
cctgtcagaagagaaaaagttgacgttaatcaattgttcgagatgatcaatacctgtatt
cgaaattttaaaatattgataaaataaatgtttgttctccaacaaatagcgtgaaaaaat
gtgacgtgccgcagtatttatcgctgaaaatggtttatttataataaaatttgagaactt
gctcattaaatttaactcaaattttgcctggtaattatccggtaattgcttgaaatatgg
tctcagccccttttttatattaaccacataacgaatgatgttatcgccataaaatatggt
tatccccgtcattttttttgacaaaaatcagggtttatgctgatttttatactttaactt
gttgatatttaaaggtatttaatttgcgtaacgataccatggaaagtattgaaagttaat
ttgtgagtggtcgcacatatcctgttcatttcattttgatacacttcatgccgtcaatga
ggtaattaacgtaggtcgttatgagcactattcttcttccgaaaacgcagcacctggtag
tctttcaggaagtcattagaagtggctctatcggctcggctgcaaaagaattagggttaa
ctcaaccagccgtcagtaaaatcattaacgatattgaagattattttggtgtggaattag
tggtgcggaaaaataccggtgtaacattaacacctgccggtcaattgttactctcccgtt
ccgaatccattacccgtgaaatgaaaaatatggttaatgagataagcggtatgtcttctg
aggcggtggtggaagtctcatttggttttccttcattgattggttttacttttatgtcag
ggatgatcaacaagttcaaagaggtgttcccgaaagcgcaggtttctatgtatgaagcgc
aactgtcttcgttcttaccggcaatccgcgacggtcgactggattttgcgattggtacgt
taagtgcagaaatgaagcttcaggatttacatgttgagccgctgttcgagtccgagtttg
tgctggtagccagtaagtcccgaacatgcaccggcaccaccacgctggagtcgttgaaga
acgaacagtgggtgttgccacaaaccaatatggggtactacagcgagcttcttactacgt
tacaaagaaatggcatcagtattgaaaacatcgttaaaaccgactcagtcgtgacaattt
ataatcttgttctcaatgctgatttcttaactgtaattccttgtgatatgacgtcacctt
ttggttcaaatcaatttattactattccggttgaagaaacattacctgtggcacaatatg
ccgcggtatggtcgaaaaattatcgtattaaaaaagcagcatcggttttggtggaattag
ccaaagagtattcatcttataatgggtgtagacgaaggcaattaatagaagttggttagt
tatttgtttttatttaaacataaataatccacctgtctgttttgcaggtgtcggttacgg
ttacctacatatttaattcaggcgaagaggttttataatgcatattacatacgatctgcc
ggttgctattgatgacattattgaagcgaaacaacgactggctgggcgaatttataaaac
aggcatgcctcgctcaaactattttagtgaacgttgcaaaggtgaaatattcctgaagtt
tgaaaatatgcagcgtacgggttcatttaaaattcgtggcgcatttaataaattaagttc
actgactgatgcggaaaaacgtaaaggtgtagtggcctgttctgcgggcaaccatgcgca
aggggtttcgctctcctgcgcgatgctgggtatcgacggtaaagtggtgatgccaaaagg
tgcgccaaaatccaaagtagcggcaacgtgcgactactccgcagaagtcgttctgcatgg
tgataatttcaacgacact


  Assignments for Essentially Identical Proteins

No essentially identical proteins found

  Links to Related Entries in Other Sites

This PEG has no links.
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  Functional Coupling

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  Attributes

Help on Attributes

Key
Link Explains Key
Value
evidence_code dlit(9484901);gjo


  Protein Families

No protein families found

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