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SEED version cvs.1555556707 (3/17/2019 22:5:7) on gum.mcs.anl.gov
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Protein fig|1116050.3.peg.2623: Escherichia coli P0299917.4

This feature in The SEED Viewer

NCBI Taxonomy Id: 1116050

Current Assignment: Membrane fusion component of tripartite multidrug resistance system
Translate Function Assignments



Context on contig APYN01000049 from base 63850 to 76611 (12762 bp)

Fid Start End Size
(nt)
  Gap Find
best
clusters
Pins Fc-sc SS Ev Function Aliases
2618 63850 65175 1326 +       1: 1   Sucrose-6-phosphate hydrolase (EC 3.2.1.B3) locus|ECP02999174_2670, protein_id|ENC55054.1, gi|476967434
2619 66241 65183 1059 - 7         Sucrose specific transcriptional regulator CscR, LacI family locus|ECP02999174_2671, protein_id|ENC55055.1, gi|476967435
2620 66409 66627 219 + 167         -serine permease DsdX # fragment locus|ECP02999174_2672, protein_id|ENC55056.1, gi|476967436
2621 66645 67973 1329 + 17         D-serine ammonia-lyase (EC 4.3.1.18) gene_name|dsdA, locus|ECP02999174_2673, protein_id|ENC55057.1, gi|476967437
2622 69619 68081 1539 - 107         Inner membrane component of tripartite multidrug resistance system locus|ECP02999174_2674, protein_id|ENC55058.1, gi|476967438
2623 70782 69619 1164 - -1         Membrane fusion component of tripartite multidrug resistance system locus|ECP02999174_2675, protein_id|ENC55059.1, gi|476967439
2624 71198 71812 615 + 415       dlit(11914367) Positive transcription regulator EvgA gene_name|evgA, locus|ECP02999174_2676, protein_id|ENC55060.1, gi|476967440
2625 72027 75410 3384 + 214         Hybrid sensory histidine kinase in two-component regulatory system with EvgA gene_name|evgS, locus|ECP02999174_2677, protein_id|ENC55061.1, gi|476967441
2626 76611 75466 1146 - 55         YfdE protein locus|ECP02999174_2678, protein_id|ENC55062.1, gi|476967442

Annotation History   /   View All Related Annotations Help on Annotations



  Subsystems in Which This Protein Plays a Role

This PEG is currently not present in any subsytem.

  Protein Sequence

>fig|1116050.3.peg.2623 Membrane fusion component of tripartite multidrug resistance system
MEQINSNKKHSNRRKYFSLLAVVLFIAFSGAYAYWSMELEDMISTDDAYVTGNADPISAQ
VSGSVTVVNHKDTNYVRQGDILVSLDKTDATIALNKAKNNLANIVRQTNKLYLQDKQYSA
EVASARIQYQQSLEDYNRRVPLAKQGVISKETLEHTKDTLISSKAALNAAIQAYKANKAL
VMNTPLNRQPQVVEAADATKEAWLALKRTDIKSPVTGYIAQRSVQVGETVSPGQSLMAVV
PARQMWVNANFKETQLTDVRIGQSVNIISDLYGENVVFHGRVTGINMGTGNAFSLLPAQN
ATGNWIKIVQRVPVEVSLDPKELMEHPLRIGLSMTATIDTKNEDIAEMPELASTVTSMPA
YTSKALVIDTSPIEKEISNIISHNGQF

MD5 = cdcf0d1d74ed829d9c283f4eec621381


  DNA Sequence

>fig|1116050.3.peg.2623 Membrane fusion component of tripartite multidrug resistance system
gtggaacagattaattcaaataaaaaacattctaacagaagaaaatacttttctttattg
gcggtagttttatttattgcgttttcaggtgcctatgcctattggtcaatggaattagaa
gacatgattagtacagatgacgcctatgtcacggggaatgcagatccaatttctgcacaa
gtctcaggtagtgtcactgtcgttaatcataaagatacgaactacgttcgacaaggtgac
attttagtttcactggataaaactgatgccactatcgcactcaataaagctaaaaataat
ctggcaaatattgttcggcaaacgaataaactatacttacaggataaacaatacagtgcc
gaagtcgcttcagcacgtattcagtatcaacaatctttagaagattataaccgtcgagtg
ccgttagcgaagcagggggttatttcaaaagaaacgctggagcataccaaagatacgtta
ataagtagcaaagcggcattgaatgccgctatccaggcttataaagcgaataaagcttta
gtaatgaacacaccattaaaccgtcagccacaagtcgttgaagcggcggatgcaactaaa
gaagcctggttggcgcttaaacgtacggatattaagagtccggttaccggctatattgcc
cagcgaagtgttcaggtcggcgaaacagtgagccccggacaatcgttaatggctgtcgta
ccggcacgtcaaatgtgggttaatgccaactttaaagaaacacaactcacggatgtacgg
attggtcaatcggtcaatattatcagcgatctttatggtgaaaatgttgtgtttcatggt
cgggtgacagggatcaatatgggaaccggcaatgcgttctccttattacctgcacaaaat
gcgacagggaactggatcaaaatcgttcagcgtgtaccggttgaagtttctcttgatcca
aaagaactcatggaacatcccttgcgtattggtttatcgatgacagcaactattgatacg
aagaacgaagacattgccgagatgcctgagctggcttcaaccgtgacctccatgccggct
tataccagtaaggctttagttatcgataccagtccgatagaaaaagaaattagcaacatt
atttcgcataatggacaattttaa


  DNA with Flanking Sequence

>fig|1116050.3.peg.2623 Membrane fusion component of tripartite multidrug resistance system
ctaagatttcaatatcgtttttgatcaataaattacgaattgctgcgatagcaagaggat
ggtcatcaataattattgcgttcatagattattccctttgcaatgaagcatctcccttct
ccctgtagtaatacagacataaggcgtcatctcattttctcaataaaaataagaaaatct
gagcttcctttaagataattcgacaagtataccatataaatagtcggcataaatgaaatg
tcaacaataaaatcagggattataccgatgatttatagtttcaagttagcactataagtc
ttctcactaatcctacaggcgtaagaattgtattgcaaaagccacggtttagtcctctgt
tgttttttttgcacctcatttaaattaggcctccaacgttcctgggataatgtgcaacac
atgcactgtgtttgatatgaagaatgaatgctcttttcattcaattcataaatttcatct
atgagaaatgagagataatagtggaacagattaattcaaataaaaaacattctaacagaa
gaaaatacttttctttattggcggtagttttatttattgcgttttcaggtgcctatgcct
attggtcaatggaattagaagacatgattagtacagatgacgcctatgtcacggggaatg
cagatccaatttctgcacaagtctcaggtagtgtcactgtcgttaatcataaagatacga
actacgttcgacaaggtgacattttagtttcactggataaaactgatgccactatcgcac
tcaataaagctaaaaataatctggcaaatattgttcggcaaacgaataaactatacttac
aggataaacaatacagtgccgaagtcgcttcagcacgtattcagtatcaacaatctttag
aagattataaccgtcgagtgccgttagcgaagcagggggttatttcaaaagaaacgctgg
agcataccaaagatacgttaataagtagcaaagcggcattgaatgccgctatccaggctt
ataaagcgaataaagctttagtaatgaacacaccattaaaccgtcagccacaagtcgttg
aagcggcggatgcaactaaagaagcctggttggcgcttaaacgtacggatattaagagtc
cggttaccggctatattgcccagcgaagtgttcaggtcggcgaaacagtgagccccggac
aatcgttaatggctgtcgtaccggcacgtcaaatgtgggttaatgccaactttaaagaaa
cacaactcacggatgtacggattggtcaatcggtcaatattatcagcgatctttatggtg
aaaatgttgtgtttcatggtcgggtgacagggatcaatatgggaaccggcaatgcgttct
ccttattacctgcacaaaatgcgacagggaactggatcaaaatcgttcagcgtgtaccgg
ttgaagtttctcttgatccaaaagaactcatggaacatcccttgcgtattggtttatcga
tgacagcaactattgatacgaagaacgaagacattgccgagatgcctgagctggcttcaa
ccgtgacctccatgccggcttataccagtaaggctttagttatcgataccagtccgatag
aaaaagaaattagcaacattatttcgcataatggacaattttaatggcaatcactaaatc
gactccggcaccattaaccggtgggacgttatggtgcgttactattgcattgtcattagc
gacgtttatgcaaatgttggattccactatttctaacgtcgcaataccgacaatatctgg
ctttctgggagcatcaacagacgaaggcacctgggttatcacctcgtttggcgtagcaaa
tgccattgcgatccctgttaccggcaggctggcacaaagaataggcgaattaaggttatt
tttactttcagtcacttttttttcgctgtcttccttaatgtgtagtttatcgaccaatct
tgatgtgctgatattttttagagtcgttcagggattaatggcggggccgttaattccact
gtcacagagtttattattaaggaattatccaccagaaaaaagaacatttgctctggcatt
atggtcaatgaccgtgattatcgctccgatatgtgggccgatattgggcggttatatttg
cgat


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  Attributes

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  Protein Families

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