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SEED version cvs.1555556707 (3/17/2019 22:5:7) on gum.mcs.anl.gov
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Protein fig|1116050.3.peg.2622: Escherichia coli P0299917.4

This feature in The SEED Viewer

NCBI Taxonomy Id: 1116050

Current Assignment: Inner membrane component of tripartite multidrug resistance system
Translate Function Assignments



Context on contig APYN01000049 from base 62612 to 75410 (12799 bp)

Fid Start End Size
(nt)
  Gap Find
best
clusters
Pins Fc-sc SS Ev Function Aliases
2617 63526 62612 915 -           Fructokinase (EC 2.7.1.4) locus|ECP02999174_2669, protein_id|ENC55053.1, gi|476967433
2618 63850 65175 1326 + 323     1: 1   Sucrose-6-phosphate hydrolase (EC 3.2.1.B3) locus|ECP02999174_2670, protein_id|ENC55054.1, gi|476967434
2619 66241 65183 1059 - 7         Sucrose specific transcriptional regulator CscR, LacI family locus|ECP02999174_2671, protein_id|ENC55055.1, gi|476967435
2620 66409 66627 219 + 167         -serine permease DsdX # fragment locus|ECP02999174_2672, protein_id|ENC55056.1, gi|476967436
2621 66645 67973 1329 + 17         D-serine ammonia-lyase (EC 4.3.1.18) gene_name|dsdA, locus|ECP02999174_2673, protein_id|ENC55057.1, gi|476967437
2622 69619 68081 1539 - 107         Inner membrane component of tripartite multidrug resistance system locus|ECP02999174_2674, protein_id|ENC55058.1, gi|476967438
2623 70782 69619 1164 - -1         Membrane fusion component of tripartite multidrug resistance system locus|ECP02999174_2675, protein_id|ENC55059.1, gi|476967439
2624 71198 71812 615 + 415       dlit(11914367) Positive transcription regulator EvgA gene_name|evgA, locus|ECP02999174_2676, protein_id|ENC55060.1, gi|476967440
2625 72027 75410 3384 + 214         Hybrid sensory histidine kinase in two-component regulatory system with EvgA gene_name|evgS, locus|ECP02999174_2677, protein_id|ENC55061.1, gi|476967441

Annotation History   /   View All Related Annotations Help on Annotations



  Subsystems in Which This Protein Plays a Role

This PEG is currently not present in any subsytem.

  Protein Sequence

>fig|1116050.3.peg.2622 Inner membrane component of tripartite multidrug resistance system
MAITKSTPAPLTGGTLWCVTIALSLATFMQMLDSTISNVAIPTISGFLGASTDEGTWVIT
SFGVANAIAIPVTGRLAQRIGELRLFLLSVTFFSLSSLMCSLSTNLDVLIFFRVVQGLMA
GPLIPLSQSLLLRNYPPEKRTFALALWSMTVIIAPICGPILGGYICDNFSWGWIFLINVP
MGIIVLTLCLTLLKGRETETSPVKMNLPGLTLLVLGVGGLQIMLDKGRDLDWFNSSTIII
LTVVSVISLISLVIWESTSENPILDLSLFKSRNFTIGIVSITCAYLFYSGAIVLMPQLLQ
ETMGYNAIWAGLAYAPIGIMPLLISPLIGRYGNKIDMRLLVTFSFLMYAVCYYWRSVTFM
PTIDFTGIILPQFFQGFAVACFFLPLTTISFSGLPDNKFANASSMSNFFRTLSGSVGTSL
TMTLWGRRESLHHSQLTATIDQFNPVFNSSSQIMDKYYGSLSGVLNEINNEITQQSLSIS
ANEIFRMAAIAFILLTVLVWFAKPPFTAKGIG

MD5 = 43c74adba6e4b9dde1e7dc3774c73549


  DNA Sequence

>fig|1116050.3.peg.2622 Inner membrane component of tripartite multidrug resistance system
atggcaatcactaaatcgactccggcaccattaaccggtgggacgttatggtgcgttact
attgcattgtcattagcgacgtttatgcaaatgttggattccactatttctaacgtcgca
ataccgacaatatctggctttctgggagcatcaacagacgaaggcacctgggttatcacc
tcgtttggcgtagcaaatgccattgcgatccctgttaccggcaggctggcacaaagaata
ggcgaattaaggttatttttactttcagtcacttttttttcgctgtcttccttaatgtgt
agtttatcgaccaatcttgatgtgctgatattttttagagtcgttcagggattaatggcg
gggccgttaattccactgtcacagagtttattattaaggaattatccaccagaaaaaaga
acatttgctctggcattatggtcaatgaccgtgattatcgctccgatatgtgggccgata
ttgggcggttatatttgcgataactttagctggggttggatatttttaatcaatgtccct
atggggattatcgtcctgacattatgcttaaccttacttaaaggaagagaaactgaaact
tcaccggtcaaaatgaatctaccaggactgaccctgttagtgctcggtgttggtggcttg
caaattatgcttgataaagggcgcgatctggattggttcaactcgagtacaataataata
ttaacagtagtatcagttatttctctgatctctttagtcatttgggagtcgacctcagag
aacccgattcttgatctcagtttgtttaagtcccgtaacttcaccattggtattgtgagt
atcacatgcgcgtatttattttactctggagcgatcgtccttatgccgcagttactccag
gaaacgatggggtataatgcgatatgggccggacttgcttatgcgcccatcggcatcatg
ccactattaatttcacctttgataggacgttatggcaacaaaatagacatgcggttgtta
gtgacatttagttttttgatgtatgcggtttgctattactggcgttctgtgacatttatg
ccaacgattgattttacaggcatcattttgccacagtttttccagggattcgccgttgcc
tgtttctttttacccttaacaacgatttcgttttcaggcttgccagataataaatttgcc
aatgcctcgagtatgagtaatttttttcgtaccttgtcaggatcagttggtacgtcgttg
acaatgacgctgtggggacgacgcgaatcgttacaccatagtcagttgacagcaaccatc
gatcaatttaaccccgtgtttaattcatcgtcacaaattatggataaatattatggttcg
ctttcaggagttcttaatgaaattaataatgaaataacccagcagtcactttctatttct
gcaaatgagattttccgtatggcggctattgcttttatcttacttacggttttggtttgg
tttgcgaaaccgccgtttacagcgaaaggcattgggtga


  DNA with Flanking Sequence

>fig|1116050.3.peg.2622 Inner membrane component of tripartite multidrug resistance system
cgaagtgttcaggtcggcgaaacagtgagccccggacaatcgttaatggctgtcgtaccg
gcacgtcaaatgtgggttaatgccaactttaaagaaacacaactcacggatgtacggatt
ggtcaatcggtcaatattatcagcgatctttatggtgaaaatgttgtgtttcatggtcgg
gtgacagggatcaatatgggaaccggcaatgcgttctccttattacctgcacaaaatgcg
acagggaactggatcaaaatcgttcagcgtgtaccggttgaagtttctcttgatccaaaa
gaactcatggaacatcccttgcgtattggtttatcgatgacagcaactattgatacgaag
aacgaagacattgccgagatgcctgagctggcttcaaccgtgacctccatgccggcttat
accagtaaggctttagttatcgataccagtccgatagaaaaagaaattagcaacattatt
tcgcataatggacaattttaatggcaatcactaaatcgactccggcaccattaaccggtg
ggacgttatggtgcgttactattgcattgtcattagcgacgtttatgcaaatgttggatt
ccactatttctaacgtcgcaataccgacaatatctggctttctgggagcatcaacagacg
aaggcacctgggttatcacctcgtttggcgtagcaaatgccattgcgatccctgttaccg
gcaggctggcacaaagaataggcgaattaaggttatttttactttcagtcactttttttt
cgctgtcttccttaatgtgtagtttatcgaccaatcttgatgtgctgatattttttagag
tcgttcagggattaatggcggggccgttaattccactgtcacagagtttattattaagga
attatccaccagaaaaaagaacatttgctctggcattatggtcaatgaccgtgattatcg
ctccgatatgtgggccgatattgggcggttatatttgcgataactttagctggggttgga
tatttttaatcaatgtccctatggggattatcgtcctgacattatgcttaaccttactta
aaggaagagaaactgaaacttcaccggtcaaaatgaatctaccaggactgaccctgttag
tgctcggtgttggtggcttgcaaattatgcttgataaagggcgcgatctggattggttca
actcgagtacaataataatattaacagtagtatcagttatttctctgatctctttagtca
tttgggagtcgacctcagagaacccgattcttgatctcagtttgtttaagtcccgtaact
tcaccattggtattgtgagtatcacatgcgcgtatttattttactctggagcgatcgtcc
ttatgccgcagttactccaggaaacgatggggtataatgcgatatgggccggacttgctt
atgcgcccatcggcatcatgccactattaatttcacctttgataggacgttatggcaaca
aaatagacatgcggttgttagtgacatttagttttttgatgtatgcggtttgctattact
ggcgttctgtgacatttatgccaacgattgattttacaggcatcattttgccacagtttt
tccagggattcgccgttgcctgtttctttttacccttaacaacgatttcgttttcaggct
tgccagataataaatttgccaatgcctcgagtatgagtaatttttttcgtaccttgtcag
gatcagttggtacgtcgttgacaatgacgctgtggggacgacgcgaatcgttacaccata
gtcagttgacagcaaccatcgatcaatttaaccccgtgtttaattcatcgtcacaaatta
tggataaatattatggttcgctttcaggagttcttaatgaaattaataatgaaataaccc
agcagtcactttctatttctgcaaatgagattttccgtatggcggctattgcttttatct
tacttacggttttggtttggtttgcgaaaccgccgtttacagcgaaaggcattgggtgat
gataaaaggagggggttatagcgggtaagaccggggatcttaagtctgcgccatcggcag
catcgctcacccagggaaaggattgcgatgctgcgttgaaacgttattaacggccttttg
ccagatattgattcatctcttcttccggcaccattccacctcccgtcgcccacaccagat
gagtggcattacgcaattgttctgcgctgaaaccgtgcatctgttggtaacttactgatg
cacacacgcgctgaggtccggccatacccgccagtgctgaaggttcaagacgaatacctt
cttcctgcgccagccagccaagcatgtcatacatggtttgatcgctaagggtatagaagc
catccagcagacgctccattgcccgcccgacaaagcctgatgcgcgaccaactgcaaggc
catccgctgcggtaaggttgtcgataccaatatcctgaacagaaatctgatcgtgtaatc
ctgtatggacgcctaacaa


  Assignments for Essentially Identical Proteins

No essentially identical proteins found

  Links to Related Entries in Other Sites

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  Functional Coupling

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  Attributes

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  Protein Families

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