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SEED version cvs.1555556707 (3/17/2019 22:5:7) on gum.mcs.anl.gov
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Protein fig|1116050.3.peg.2621: Escherichia coli P0299917.4

This feature in The SEED Viewer

NCBI Taxonomy Id: 1116050

Current Assignment: D-serine ammonia-lyase (EC 4.3.1.18)
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Context on contig APYN01000049 from base 61293 to 75410 (14118 bp)

Fid Start End Size
(nt)
  Gap Find
best
clusters
Pins Fc-sc SS Ev Function Aliases
2616 62540 61293 1248 -       1: 1   Sucrose permease, major facilitator superfamily locus|ECP02999174_2668, protein_id|ENC55052.1, gi|476967432
2617 63526 62612 915 - 71         Fructokinase (EC 2.7.1.4) locus|ECP02999174_2669, protein_id|ENC55053.1, gi|476967433
2618 63850 65175 1326 + 323     1: 1   Sucrose-6-phosphate hydrolase (EC 3.2.1.B3) locus|ECP02999174_2670, protein_id|ENC55054.1, gi|476967434
2619 66241 65183 1059 - 7         Sucrose specific transcriptional regulator CscR, LacI family locus|ECP02999174_2671, protein_id|ENC55055.1, gi|476967435
2620 66409 66627 219 + 167         -serine permease DsdX # fragment locus|ECP02999174_2672, protein_id|ENC55056.1, gi|476967436
2621 66645 67973 1329 + 17         D-serine ammonia-lyase (EC 4.3.1.18) gene_name|dsdA, locus|ECP02999174_2673, protein_id|ENC55057.1, gi|476967437
2622 69619 68081 1539 - 107         Inner membrane component of tripartite multidrug resistance system locus|ECP02999174_2674, protein_id|ENC55058.1, gi|476967438
2623 70782 69619 1164 - -1         Membrane fusion component of tripartite multidrug resistance system locus|ECP02999174_2675, protein_id|ENC55059.1, gi|476967439
2624 71198 71812 615 + 415       dlit(11914367) Positive transcription regulator EvgA gene_name|evgA, locus|ECP02999174_2676, protein_id|ENC55060.1, gi|476967440
2625 72027 75410 3384 + 214         Hybrid sensory histidine kinase in two-component regulatory system with EvgA gene_name|evgS, locus|ECP02999174_2677, protein_id|ENC55061.1, gi|476967441

Annotation History   /   View All Related Annotations Help on Annotations



  Subsystems in Which This Protein Plays a Role

This PEG is currently not present in any subsytem.

  Protein Sequence

>fig|1116050.3.peg.2621 D-serine ammonia-lyase (EC 4.3.1.18)
MENAKMNSLIAQYPLVKDLVALKETTWFNPGTTSLAEGLPYVGLTEQDVQDAHARLSRFA
PYLAKAFPETAATGGIIESELVAIPAMQKRLEKEYQQPISGQLLLKKDSHLPISGSIKAR
GGIYEVLAHAEKLALEAGLLTLDDDYSKLLSPEFKQFFSQYSIAVGSTGNLGLSIGIMSA
RIGFKVTVHMSADARAWKKAKLRSHGVTVVEYEQDYGVAVEEGRKAAQSDPNCFFIDDEN
SRTLFLGYSVAGQRLKAQFAQQGRIVDADNPLFVYLPCGVGGGPGGVAFGLKLAFGDHVH
CFFAEPTHSPCMLLGVHTGLHDQISVQDIGIDNLTAADGLAVGRASGFVGRAMERLLDGF
YTLSDQTMYDMLGWLAQEEGIRLEPSALAGMAGPQRVCASVSYQQMHGFSAEQLRNATHL
VWATGGGMVPEEEMNQYLAKGR

MD5 = 4d967f835c8efed64743cb870a1b3d2c


  DNA Sequence

>fig|1116050.3.peg.2621 D-serine ammonia-lyase (EC 4.3.1.18)
atggaaaacgctaaaatgaactcgctcatcgcccagtatccgttggtaaaggatctggtt
gctcttaaagaaaccacctggtttaatcctggcacgacctcattggctgaaggtttacct
tatgttggcctgaccgaacaggatgttcaggacgcccatgcgcgcttatcccgttttgca
ccctatctggcaaaagcatttcctgaaactgctgccactggggggattattgaatcagaa
ctggttgccattccagctatgcaaaaacggctggaaaaagaatatcagcaaccgatcagc
gggcaactgttactgaaaaaagatagccatttgcccatttccggctccataaaagcacgc
ggcgggatttatgaagtcctggcacacgcagaaaaactggctctggaagcggggttgctg
acgcttgatgatgactacagcaaactgctttctccggagtttaaacagttctttagccaa
tacagcattgctgtgggctcaaccggaaatctggggttatcaatcggcattatgagcgcc
cgcattggctttaaggtgacagttcatatgtctgctgatgcccgggcatggaaaaaagcg
aaactgcgcagccatggcgttacggtcgtggaatatgagcaagattatggtgttgccgtc
gaggaaggacgtaaagcagcgcagtctgacccgaactgtttctttattgatgacgaaaat
tcccgcacgttgttccttgggtattccgtcgctggccagcgtcttaaagcgcaatttgcc
cagcaaggccgtatcgtcgatgctgataaccctctgtttgtctatctgccgtgtggtgtt
ggcggtggtcctggtggcgtcgcattcgggcttaaactggcgtttggcgatcatgttcac
tgcttttttgccgaaccaacgcactccccttgtatgttgttaggcgtccatacaggatta
cacgatcagatttctgttcaggatattggtatcgacaaccttaccgcagcggatggcctt
gcagttggtcgcgcatcaggctttgtcgggcgggcaatggagcgtctgctggatggcttc
tatacccttagcgatcaaaccatgtatgacatgcttggctggctggcgcaggaagaaggt
attcgtcttgaaccttcagcactggcgggtatggccggacctcagcgcgtgtgtgcatca
gtaagttaccaacagatgcacggtttcagcgcagaacaattgcgtaatgccactcatctg
gtgtgggcgacgggaggtggaatggtgccggaagaagagatgaatcaatatctggcaaaa
ggccgttaa


  DNA with Flanking Sequence

>fig|1116050.3.peg.2621 D-serine ammonia-lyase (EC 4.3.1.18)
ccgccaggcgtgcgacatcctttaatgaagccatacccaagccgtttgccgtaaaacggg
cactgtagcagaaacagacgtcactggcgagatccaacgccctatcacctgacacagcaa
tacaataaaaaataacaataattcccggacaattgtccccaattccgcctctgttctcgc
caacgagtaaccatataggcaagtaagtaaaacatgccaactggcatcgccaacctggag
aagaaaatataaatatggatcattgtgctgccgctgtatcccgacatcagcccggaaatt
attgcgattgctatcggttcaggtgcaattggctgcacgatcgttacggactcgcttttc
tggctagtgaagcaatattgcggcgctacgctcaatgaaacatttaaatactatacgaca
gcgacatttatcgcttcagtcgtcgctctggcgggcacattcctgctgtcatttatcatc
taagcgcaaagagacgtactatggaaaacgctaaaatgaactcgctcatcgcccagtatc
cgttggtaaaggatctggttgctcttaaagaaaccacctggtttaatcctggcacgacct
cattggctgaaggtttaccttatgttggcctgaccgaacaggatgttcaggacgcccatg
cgcgcttatcccgttttgcaccctatctggcaaaagcatttcctgaaactgctgccactg
gggggattattgaatcagaactggttgccattccagctatgcaaaaacggctggaaaaag
aatatcagcaaccgatcagcgggcaactgttactgaaaaaagatagccatttgcccattt
ccggctccataaaagcacgcggcgggatttatgaagtcctggcacacgcagaaaaactgg
ctctggaagcggggttgctgacgcttgatgatgactacagcaaactgctttctccggagt
ttaaacagttctttagccaatacagcattgctgtgggctcaaccggaaatctggggttat
caatcggcattatgagcgcccgcattggctttaaggtgacagttcatatgtctgctgatg
cccgggcatggaaaaaagcgaaactgcgcagccatggcgttacggtcgtggaatatgagc
aagattatggtgttgccgtcgaggaaggacgtaaagcagcgcagtctgacccgaactgtt
tctttattgatgacgaaaattcccgcacgttgttccttgggtattccgtcgctggccagc
gtcttaaagcgcaatttgcccagcaaggccgtatcgtcgatgctgataaccctctgtttg
tctatctgccgtgtggtgttggcggtggtcctggtggcgtcgcattcgggcttaaactgg
cgtttggcgatcatgttcactgcttttttgccgaaccaacgcactccccttgtatgttgt
taggcgtccatacaggattacacgatcagatttctgttcaggatattggtatcgacaacc
ttaccgcagcggatggccttgcagttggtcgcgcatcaggctttgtcgggcgggcaatgg
agcgtctgctggatggcttctatacccttagcgatcaaaccatgtatgacatgcttggct
ggctggcgcaggaagaaggtattcgtcttgaaccttcagcactggcgggtatggccggac
ctcagcgcgtgtgtgcatcagtaagttaccaacagatgcacggtttcagcgcagaacaat
tgcgtaatgccactcatctggtgtgggcgacgggaggtggaatggtgccggaagaagaga
tgaatcaatatctggcaaaaggccgttaataacgtttcaacgcagcatcgcaatcctttc
cctgggtgagcgatgctgccgatggcgcagacttaagatccccggtcttacccgctataa
ccccctccttttatcatcacccaatgcctttcgctgtaaacggcggtttcgcaaaccaaa
ccaaaaccgtaagtaagataaaagcaatagccgccatacggaaaatctcatttgcagaaa
tagaaagtgactgctgggttatttcattattaatttcattaagaactcctgaaagcgaac
cataatatttatccataatttgtgacgatgaattaaacacggggttaaattgatcgatgg
ttgctgtcaactgactatggtgtaacgattcgcgtcgtccccacagcgtcattgtcaacg
acgtaccaactgatcctgacaaggtacgaaaaaaattactcatactcgaggcattggcaa
atttattatctggcaagcctgaaaacgaaatcgttgttaagggtaaaaa


  Assignments for Essentially Identical Proteins

No essentially identical proteins found

  Links to Related Entries in Other Sites

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  Functional Coupling

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  Attributes

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  Protein Families

No protein families found

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