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SEED version cvs.1555556707 (3/17/2019 22:5:7) on gum.mcs.anl.gov
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Protein fig|1116050.3.peg.2620: Escherichia coli P0299917.4

This feature in The SEED Viewer

NCBI Taxonomy Id: 1116050

Current Assignment: -serine permease DsdX # fragment
Translate Function Assignments


Context on contig APYN01000049 from base 61293 to 71812 (10520 bp)

Fid Start End Size
(nt)		   Gap Find
best
clusters		 Pins Fc-sc SS Ev Function Aliases
2616 62540 61293 1248 -       1: 1   Sucrose permease, major facilitator superfamily locus|ECP02999174_2668, protein_id|ENC55052.1, gi|476967432
2617 63526 62612 915 - 71         Fructokinase (EC 2.7.1.4) locus|ECP02999174_2669, protein_id|ENC55053.1, gi|476967433
2618 63850 65175 1326 + 323     1: 1   Sucrose-6-phosphate hydrolase (EC 3.2.1.B3) locus|ECP02999174_2670, protein_id|ENC55054.1, gi|476967434
2619 66241 65183 1059 - 7         Sucrose specific transcriptional regulator CscR, LacI family locus|ECP02999174_2671, protein_id|ENC55055.1, gi|476967435
2620 66409 66627 219 + 167         -serine permease DsdX # fragment locus|ECP02999174_2672, protein_id|ENC55056.1, gi|476967436
2621 66645 67973 1329 + 17         D-serine ammonia-lyase (EC 4.3.1.18) gene_name|dsdA, locus|ECP02999174_2673, protein_id|ENC55057.1, gi|476967437
2622 69619 68081 1539 - 107         Inner membrane component of tripartite multidrug resistance system locus|ECP02999174_2674, protein_id|ENC55058.1, gi|476967438
2623 70782 69619 1164 - -1         Membrane fusion component of tripartite multidrug resistance system locus|ECP02999174_2675, protein_id|ENC55059.1, gi|476967439
2624 71198 71812 615 + 415       dlit(11914367) Positive transcription regulator EvgA gene_name|evgA, locus|ECP02999174_2676, protein_id|ENC55060.1, gi|476967440

Annotation History   /   View All Related Annotations Help on Annotations


  Subsystems in Which This Protein Plays a Role

This PEG is currently not present in any subsytem.

  Protein Sequence

>fig|1116050.3.peg.2620 -serine permease DsdX # fragment
MLPLYPDISPEIIAIAIGSGAIGCTIVTDSLFWLVKQYCGATLNETFKYYTTATFIASVV
ALAGTFLLSFII

MD5 = 466aaae196e1850f872bc5ae40222528


  DNA Sequence

>fig|1116050.3.peg.2620 -serine permease DsdX # fragment
gtgctgccgctgtatcccgacatcagcccggaaattattgcgattgctatcggttcaggt
gcaattggctgcacgatcgttacggactcgcttttctggctagtgaagcaatattgcggc
gctacgctcaatgaaacatttaaatactatacgacagcgacatttatcgcttcagtcgtc
gctctggcgggcacattcctgctgtcatttatcatctaa


  DNA with Flanking Sequence

>fig|1116050.3.peg.2620 -serine permease DsdX # fragment
ctcgctggcggtttgctcaatggcaagcagaatatcaacagagaaaggagtggtagccgt
gtcctgcgccagcacggcgagagtcgacggcttacgtccttgagcgcgcatcttacgggc
ggaaagatcaggaacataattcagggtctggattgcctgcaatacgcggtcacgcgttgc
aggacgcacagattctgcattatgcatcacccgggagactgtcatcatcgacactcccgc
caggcgtgcgacatcctttaatgaagccatacccaagccgtttgccgtaaaacgggcact
gtagcagaaacagacgtcactggcgagatccaacgccctatcacctgacacagcaataca
ataaaaaataacaataattcccggacaattgtccccaattccgcctctgttctcgccaac
gagtaaccatataggcaagtaagtaaaacatgccaactggcatcgccaacctggagaaga
aaatataaatatggatcattgtgctgccgctgtatcccgacatcagcccggaaattattg
cgattgctatcggttcaggtgcaattggctgcacgatcgttacggactcgcttttctggc
tagtgaagcaatattgcggcgctacgctcaatgaaacatttaaatactatacgacagcga
catttatcgcttcagtcgtcgctctggcgggcacattcctgctgtcatttatcatctaag
cgcaaagagacgtactatggaaaacgctaaaatgaactcgctcatcgcccagtatccgtt
ggtaaaggatctggttgctcttaaagaaaccacctggtttaatcctggcacgacctcatt
ggctgaaggtttaccttatgttggcctgaccgaacaggatgttcaggacgcccatgcgcg
cttatcccgttttgcaccctatctggcaaaagcatttcctgaaactgctgccactggggg
gattattgaatcagaactggttgccattccagctatgcaaaaacggctggaaaaagaata
tcagcaaccgatcagcgggcaactgttactgaaaaaagatagccatttgcccatttccgg
ctccataaaagcacgcggcgggatttatgaagtcctggcacacgcagaaaaactggctct
ggaagcggggttgctgacgcttgatgatgactacagcaaactgctttctccggagtttaa
acagttctttagccaatac


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No essentially identical proteins found

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  Functional Coupling

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  Attributes

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  Protein Families

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