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SEED version cvs.1555556707 (3/17/2019 22:5:7) on gum.mcs.anl.gov
The SEED


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Protein fig|1116007.3.peg.4694: Escherichia coli 2731150

This feature in The SEED Viewer

NCBI Taxonomy Id: 1116007

Current Assignment: HTH-type transcriptional regulator IlvY
Translate Function Assignments



Context on contig AQEB01000175 from base 18999 to 32671 (13673 bp)

Fid Start End Size
(nt)
  Gap Find
best
clusters
Pins Fc-sc SS Ev Function Aliases
4689 18999 20645 1647 +       1: 1   Acetolactate synthase large subunit (EC 2.2.1.6) locus|EC2731150_4373, protein_id|EMW72987.1, gi|476254220
4690 20642 20905 264 + -4     1: 1 dlit(3550695) Acetolactate synthase small subunit (EC 2.2.1.6) gene_name|ilvM, locus|EC2731150_4374, protein_id|EMW72988.1, gi|476254221
4691 20925 21854 930 + 19     2: 3 1 dlit(9163511)
dlit(3550695)
dlit(3897211)
dlit(3069843)
Branched-chain amino acid aminotransferase (EC 2.6.1.42) gene_name|ilvE, locus|EC2731150_4375, protein_id|EMW72989.1, gi|476254222
4692 21919 23769 1851 + 64     1: 1 dlit(3550695)
dlit(8325851)
dlit(13727223)
Dihydroxy-acid dehydratase (EC 4.2.1.9) gene_name|ilvD, locus|EC2731150_4376, protein_id|EMW72990.1, gi|476254223
4693 23772 25316 1545 + 2     1: 1 dlit(240428) Threonine dehydratase biosynthetic (EC 4.3.1.19) locus|EC2731150_4377, protein_id|EMW72991.1, gi|476254224
4694 26261 25368 894 - 51         HTH-type transcriptional regulator IlvY locus|EC2731150_4378, protein_id|EMW72992.1, gi|476254225
4695 26411 27886 1476 + 149     2: 1 2 dlit(2653423)
dlit(15654896)
dlit(9015391)
Ketol-acid reductoisomerase (EC 1.1.1.86) gene_name|ilvC, locus|EC2731150_4379, protein_id|EMW72993.1, gi|476254226
4696 28254 27973 282 - 86       dlit(8163020) Peptidyl-prolyl cis-trans isomerase PpiC (EC 5.2.1.8) gene_name|ppiC, locus|EC2731150_4380, protein_id|EMW72994.1, gi|476254227
4697 28902 28453 450 - 198         FIG00642180: hypothetical protein locus|EC2731150_4381, protein_id|EMW72995.1, gi|476254228
4698 29119 31140 2022 + 216         ATP-dependent DNA helicase Rep gene_name|rep, locus|EC2731150_4382, protein_id|EMW72996.1, gi|476254229
4699 32671 31187 1485 - 46         Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase (EC 3.6.1.40) @ Exopolyphosphatase (EC 3.6.1.11) locus|EC2731150_4383, protein_id|EMW72997.1, gi|476254230

Annotation History   /   View All Related Annotations Help on Annotations



  Subsystems in Which This Protein Plays a Role

This PEG is currently not present in any subsytem.

  Protein Sequence

>fig|1116007.3.peg.4694 HTH-type transcriptional regulator IlvY
MDLRDLKTFLHLAESRHFGRSARAMHVSPSTLSRQIQRLEEDLGQPLFVRDNRTVTLTEA
GEELRVFSQQTLLQYQQLRHTIDQQGPSLSGELHIFCSVTAAYSHLPPILDRFRAEHPSV
EIKLTTGDAADAMEKVVTGEADLAIAGKPETLPGAVAFSMLENLAVVLIAPALPCPVRNQ
VSVEKPDWSTVPFIMADQGPVRRRIELWFRRNKISNPMIYATVGGHEAMVSMVALGCGVA
LLPEVVLENSPEPVRNRVMILERSDEKTPFELGVCAQKKRLHEPLIEAFWKILPNHK

MD5 = 755c07b6b18983c8c3bcf48b2eaa87f2


  DNA Sequence

>fig|1116007.3.peg.4694 HTH-type transcriptional regulator IlvY
gtggatttacgcgatctgaaaaccttcctgcatctggcggaaagccgccattttggccgc
agcgcgcgggcgatgcacgttagcccatccacgctctcacggcagattcagcgcctggaa
gaagatctcggtcagccgctgtttgtgcgcgataaccgcacggtgacgctgactgaagcg
ggcgaagagctgcgcgttttctcccagcaaacgctgttgcagtatcagcagttgcgccac
accatcgatcagcaagggccgtcgctctctggcgaattacatatcttctgctcggtgacc
gctgcctacagccatctgccgccgattctggatcgcttccgcgcggaacacccgtcggtg
gagattaaacttactactggtgatgcggcagatgcgatggaaaaggtggtcactggtgaa
gcggatctggcgattgcgggtaaaccggaaaccttgcccggcgcagtggcgttttcgatg
ctggagaatctggcagtagtgctgattgcccccgcgctgccctgcccggtgcgtaatcag
gtgtcggtagagaagccggactggtcaacggtgccgtttattatggccgatcaggggccg
gtacgccgccgcattgaactgtggtttcgacgcaataaaatcagtaacccgatgatttac
gccacggttggcgggcatgaagcgatggtatcgatggtggcactcggctgtggcgtggca
ttgttgccggaagtggtgctggaaaacagccccgaaccggtgcgtaaccgcgtgatgatt
ttagagcgcagcgatgagaaaacgccgtttgagctgggcgtgtgtgcgcagaaaaagcgg
ctacatgagccgctaattgaggcattctggaagattttgccgaaccacaaatga


  DNA with Flanking Sequence

>fig|1116007.3.peg.4694 HTH-type transcriptional regulator IlvY
ggtgcgcactacatcagagtgctgcttgtccggcgtcaggttaatcaccagatccgcctg
tgggatcagttcttcgtaagtacccactttaaaaccattttcggtcgctttacgccagga
cgcgcgcttctcggcaatcgcttctttacgcagagcgtaggagatatcgagaccagaatc
acgcatgttcaggccctggttcagaccctgtgcgccacagccgacgatgactactttttt
accctgaaggtagctcgcgccatcggcgaattcatcgcggcccataaagcgacatttgcc
cagctgtgccagctgctggcgcagattcagtgtattgaagtagttagccatggtgattcc
tcgtgatgttgtgcttcttattgttcggttcgcgtttgcgagattgaattcactatatga
caggaaatttattgcggaaattgatatattcacaacgtcacattgcaatttttgcaacgt
caacatcgagggctgtccctgtggatttacgcgatctgaaaaccttcctgcatctggcgg
aaagccgccattttggccgcagcgcgcgggcgatgcacgttagcccatccacgctctcac
ggcagattcagcgcctggaagaagatctcggtcagccgctgtttgtgcgcgataaccgca
cggtgacgctgactgaagcgggcgaagagctgcgcgttttctcccagcaaacgctgttgc
agtatcagcagttgcgccacaccatcgatcagcaagggccgtcgctctctggcgaattac
atatcttctgctcggtgaccgctgcctacagccatctgccgccgattctggatcgcttcc
gcgcggaacacccgtcggtggagattaaacttactactggtgatgcggcagatgcgatgg
aaaaggtggtcactggtgaagcggatctggcgattgcgggtaaaccggaaaccttgcccg
gcgcagtggcgttttcgatgctggagaatctggcagtagtgctgattgcccccgcgctgc
cctgcccggtgcgtaatcaggtgtcggtagagaagccggactggtcaacggtgccgttta
ttatggccgatcaggggccggtacgccgccgcattgaactgtggtttcgacgcaataaaa
tcagtaacccgatgatttacgccacggttggcgggcatgaagcgatggtatcgatggtgg
cactcggctgtggcgtggcattgttgccggaagtggtgctggaaaacagccccgaaccgg
tgcgtaaccgcgtgatgattttagagcgcagcgatgagaaaacgccgtttgagctgggcg
tgtgtgcgcagaaaaagcggctacatgagccgctaattgaggcattctggaagattttgc
cgaaccacaaatgacgttgtcgcgcgggtaggcctgataagcgaagcgctatcaggcatt
tttccctaacccgccaaaaagaacctgaacgccgggttattggtttcgtcgtggcaatcg
tagcccagctcattcagccgggtttcgaaatccggttcatggtcgccaagttcgaacgcc
gccagtacgcgcccgtagtcggtgccatggctgcgatagtggaacaaagaaatgttccag
tacgtacccagcgtgttgaggaagcgcagcagcgcgcccggtgattccgggaattcgaag
ctgtagaggcgttcctgcaacggatgcgatggacgtccgccgaccatatagcgcacgtgt
agcttcgccatttcgtcgtcggagagatcaaccacgctgtagccgccgtcgttgagcatc
tgcaaaatttctttgcgctcttcgaggccgcggctcaggcgcacaccgacaaagatgcag
gcgtttttggcatcggcaaaacggtagttgaact


  Assignments for Essentially Identical Proteins

No essentially identical proteins found

  Links to Related Entries in Other Sites

This PEG has no links.
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  Functional Coupling

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  Attributes

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  Protein Families

No protein families found

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