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SEED version cvs.1555556707 (3/17/2019 22:5:7) on gum.mcs.anl.gov
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Protein fig|1116007.3.peg.4693: Escherichia coli 2731150

This feature in The SEED Viewer

NCBI Taxonomy Id: 1116007

Current Assignment: Threonine dehydratase biosynthetic (EC 4.3.1.19)
Translate Function Assignments



Context on contig AQEB01000175 from base 18999 to 31140 (12142 bp)

Fid Start End Size
(nt)
  Gap Find
best
clusters
Pins Fc-sc SS Ev Function Aliases
4689 18999 20645 1647 +       1: 1   Acetolactate synthase large subunit (EC 2.2.1.6) locus|EC2731150_4373, protein_id|EMW72987.1, gi|476254220
4690 20642 20905 264 + -4     1: 1 dlit(3550695) Acetolactate synthase small subunit (EC 2.2.1.6) gene_name|ilvM, locus|EC2731150_4374, protein_id|EMW72988.1, gi|476254221
4691 20925 21854 930 + 19     2: 3 1 dlit(9163511)
dlit(3550695)
dlit(3897211)
dlit(3069843)
Branched-chain amino acid aminotransferase (EC 2.6.1.42) gene_name|ilvE, locus|EC2731150_4375, protein_id|EMW72989.1, gi|476254222
4692 21919 23769 1851 + 64     1: 1 dlit(3550695)
dlit(8325851)
dlit(13727223)
Dihydroxy-acid dehydratase (EC 4.2.1.9) gene_name|ilvD, locus|EC2731150_4376, protein_id|EMW72990.1, gi|476254223
4693 23772 25316 1545 + 2     1: 1 dlit(240428) Threonine dehydratase biosynthetic (EC 4.3.1.19) locus|EC2731150_4377, protein_id|EMW72991.1, gi|476254224
4694 26261 25368 894 - 51         HTH-type transcriptional regulator IlvY locus|EC2731150_4378, protein_id|EMW72992.1, gi|476254225
4695 26411 27886 1476 + 149     2: 1 2 dlit(2653423)
dlit(15654896)
dlit(9015391)
Ketol-acid reductoisomerase (EC 1.1.1.86) gene_name|ilvC, locus|EC2731150_4379, protein_id|EMW72993.1, gi|476254226
4696 28254 27973 282 - 86       dlit(8163020) Peptidyl-prolyl cis-trans isomerase PpiC (EC 5.2.1.8) gene_name|ppiC, locus|EC2731150_4380, protein_id|EMW72994.1, gi|476254227
4697 28902 28453 450 - 198         FIG00642180: hypothetical protein locus|EC2731150_4381, protein_id|EMW72995.1, gi|476254228
4698 29119 31140 2022 + 216         ATP-dependent DNA helicase Rep gene_name|rep, locus|EC2731150_4382, protein_id|EMW72996.1, gi|476254229

Annotation History   /   View All Related Annotations Help on Annotations



  Subsystems in Which This Protein Plays a Role

Subsystem Curator Role
Leucine,_Isoleucine,_and_Valine_biosynthesis_PanGenomes Acharya_Geeta_user Threonine dehydratase biosynthetic (EC 4.3.1.19)


  Protein Sequence

>fig|1116007.3.peg.4693 Threonine dehydratase biosynthetic (EC 4.3.1.19)
MADSQPLSGAPEGAEYLRAVLRAPVYEAAQVTPLQKMEKLSSRLDNVILVKREDRQPVHS
FKLRGAYAMMAGLTEEQKAHGVITASAGNHAQGVAFSSARLGVKALIVMPTATADIKVDA
VRGFGGEVLLHGANFDEAKAKAIELSQQQGFTWVPPFDHPMVIAGQGTLALELLQQDAHL
DRVFVPVGGGGLAAGVAVLIKQLMPQIKVIAVEAEDSACLKAALDAGHPVDLPRVGLFAE
GVAVKRIGDETFRLCQEYLDDIITVDSDAICAAMKDLFEDVRAVAEPSGALALAGMKKYI
ALHNIRGERLAHILSGANVNFHGLRYVSERCELGEQREALLAVTIPEEKGSFLKFCQLLG
GRSVTEFNYRFADAKNACIFVGVRLSRGLEERKEILQMLNDGGYSVVDLSDDEMAKLHVR
YMVGGRPSHPLQERLYSFEFPESPGALLRFLNTLGTYWNISLFHYRSHGTDYGRVLAAFE
LGDHEPDFETRLNELGYDCHDETNNPAFRFFLAG

MD5 = 4dc325fe6b3788855c5faaf3514c2344


  DNA Sequence

>fig|1116007.3.peg.4693 Threonine dehydratase biosynthetic (EC 4.3.1.19)
atggctgactcgcaacccctgtccggtgctccggaaggtgccgaatatttaagagcagtg
ctgcgcgcgccggtttacgaggcggcgcaggttacgccgctacaaaaaatggaaaaactg
tcgtcgcgtcttgataacgtcattctggtgaagcgcgaagatcgccagccagtgcacagc
tttaagctgcgcggcgcatacgccatgatggcgggcctgacggaagaacagaaagcgcac
ggcgtgatcactgcttctgcgggtaaccacgcgcagggcgtcgcgttttcttctgcgcgg
ttaggcgtgaaggccctgatcgttatgccaaccgccaccgccgacatcaaagtcgacgcg
gtgcgcggcttcggcggcgaagtgctgctccacggcgcgaactttgatgaagcgaaagcc
aaagcgatcgaactgtcacagcagcaggggttcacctgggtgccgccgttcgaccatccg
atggtgattgccgggcaaggcacgctggcgctggaactgctccagcaggacgcccatctc
gaccgcgtatttgtgccagtcggcggcggcggtctggctgctggcgtggcggtgctgatc
aaacaactgatgccgcaaatcaaagtgatcgccgtagaagcggaagactccgcctgcctg
aaagcagcgctggatgcgggtcatccggttgatctgccgcgtgtagggctatttgctgaa
ggcgtagcggtaaaacgcatcggtgacgaaaccttccgtttatgccaggagtatctcgac
gacatcatcaccgtcgatagcgatgcgatctgtgcggcgatgaaggatttattcgaagat
gtgcgcgcggtggcggaaccctctggcgcgctggcgctggcgggaatgaaaaaatatatc
gccctgcacaacattcgcggcgaacggctggcgcatattctttccggtgccaacgtgaac
ttccacggcctgcgctacgtctcagaacgctgcgaactgggcgaacagcgtgaagcgttg
ttggcggtgaccattccggaagaaaaaggcagcttcctcaaattctgccaactgcttggc
gggcgttcggtcaccgagttcaactaccgttttgccgatgccaaaaacgcctgcatcttt
gtcggtgtgcgcctgagccgcggcctcgaagagcgcaaagaaattttgcagatgctcaac
gacggcggctacagcgtggttgatctctccgacgacgaaatggcgaagctacacgtgcgc
tatatggtcggcggacgtccatcgcatccgttgcaggaacgcctctacagcttcgaattc
ccggaatcaccgggcgcgctgctgcgcttcctcaacacgctgggtacgtactggaacatt
tctttgttccactatcgcagccatggcaccgactacgggcgcgtactggcggcgttcgaa
cttggcgaccatgaaccggatttcgaaacccggctgaatgagctgggctacgattgccac
gacgaaaccaataacccggcgttcaggttctttttggcgggttag


  DNA with Flanking Sequence

>fig|1116007.3.peg.4693 Threonine dehydratase biosynthetic (EC 4.3.1.19)
gcgaaagtgtacgaaagccaggacgatgcggtagaagcgattctcggcggtaaagttgtc
gccggagatgtggtagtaattcgctatgaaggcccgaaaggcggtccggggatgcaggaa
atgctctacccaaccagcttcctgaaatcaatgggtctcggcaaagcctgtgcgctgatc
accgacggtcgtttctctggtggcacctctggtctttccatcggccacgtctcaccggaa
gcggcaagcggcggcagcattggcctgattgaagatggtgacctgatcgctatcgacatc
ccgaaccgtggcattcagttacaggtaagcgatgccgaactggcggcgcgtcgtgaagcg
caggacgctcgaggtgacaaagcctggacgccgaaaaatcgtgaacgtcaggtctccttt
gccctgcgtgcttatgccagcctggcaaccagcgccgacaaaggcgcggtgcgcgataaa
tcgaaactggggggttaataatggctgactcgcaacccctgtccggtgctccggaaggtg
ccgaatatttaagagcagtgctgcgcgcgccggtttacgaggcggcgcaggttacgccgc
tacaaaaaatggaaaaactgtcgtcgcgtcttgataacgtcattctggtgaagcgcgaag
atcgccagccagtgcacagctttaagctgcgcggcgcatacgccatgatggcgggcctga
cggaagaacagaaagcgcacggcgtgatcactgcttctgcgggtaaccacgcgcagggcg
tcgcgttttcttctgcgcggttaggcgtgaaggccctgatcgttatgccaaccgccaccg
ccgacatcaaagtcgacgcggtgcgcggcttcggcggcgaagtgctgctccacggcgcga
actttgatgaagcgaaagccaaagcgatcgaactgtcacagcagcaggggttcacctggg
tgccgccgttcgaccatccgatggtgattgccgggcaaggcacgctggcgctggaactgc
tccagcaggacgcccatctcgaccgcgtatttgtgccagtcggcggcggcggtctggctg
ctggcgtggcggtgctgatcaaacaactgatgccgcaaatcaaagtgatcgccgtagaag
cggaagactccgcctgcctgaaagcagcgctggatgcgggtcatccggttgatctgccgc
gtgtagggctatttgctgaaggcgtagcggtaaaacgcatcggtgacgaaaccttccgtt
tatgccaggagtatctcgacgacatcatcaccgtcgatagcgatgcgatctgtgcggcga
tgaaggatttattcgaagatgtgcgcgcggtggcggaaccctctggcgcgctggcgctgg
cgggaatgaaaaaatatatcgccctgcacaacattcgcggcgaacggctggcgcatattc
tttccggtgccaacgtgaacttccacggcctgcgctacgtctcagaacgctgcgaactgg
gcgaacagcgtgaagcgttgttggcggtgaccattccggaagaaaaaggcagcttcctca
aattctgccaactgcttggcgggcgttcggtcaccgagttcaactaccgttttgccgatg
ccaaaaacgcctgcatctttgtcggtgtgcgcctgagccgcggcctcgaagagcgcaaag
aaattttgcagatgctcaacgacggcggctacagcgtggttgatctctccgacgacgaaa
tggcgaagctacacgtgcgctatatggtcggcggacgtccatcgcatccgttgcaggaac
gcctctacagcttcgaattcccggaatcaccgggcgcgctgctgcgcttcctcaacacgc
tgggtacgtactggaacatttctttgttccactatcgcagccatggcaccgactacgggc
gcgtactggcggcgttcgaacttggcgaccatgaaccggatttcgaaacccggctgaatg
agctgggctacgattgccacgacgaaaccaataacccggcgttcaggttctttttggcgg
gttagggaaaaatgcctgatagcgcttcgcttatcaggcctacccgcgcgacaacgtcat
ttgtggttcggcaaaatcttccagaatgcctcaattagcggctcatgtagccgctttttc
tgcgcacacacgcccagctcaaacggcgttttctcatcgctgcgctctaaaatcatcacg
cggttacgcaccggttcggggctgttttccagcaccacttccggcaacaatgccacgcca
cagccgagtgccaccatcgataccatcgcttcatgcccgccaaccgtggcgtaaatcatc
gggttactgattttattgcgtcgaaaccacagttcaatgcggcggcgtaccggcccctga
tcggccataataaacggcaccgttgaccagtccggcttctctaccgacacctgattacgc
accgggcagggcagcgcgggggcaatcagcactactgccagattctccagcatcgaaaac
gccactgcgccgggcaaggtttccg


  Assignments for Essentially Identical Proteins

No essentially identical proteins found

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  Functional Coupling

Score Peg Function


  Attributes

Help on Attributes

Key
Link Explains Key
Value
evidence_code dlit(240428);SvetaG


  Protein Families

No protein families found

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