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SEED version cvs.1555556707 (3/17/2019 22:5:7) on gum.mcs.anl.gov
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Protein fig|1074482.3.peg.373: Bifidobacterium breve DPC 6330

This feature in The SEED Viewer

NCBI Taxonomy Id: 1074482

Current Assignment: gp2, terminase
Translate Function Assignments



Context on contig AFXX01000010 from base 44135 to 56330 (12196 bp)

Fid Start End Size
(nt)
  Gap Find
best
clusters
Pins Fc-sc SS Ev Function Aliases
361 44135 44416 282 +           hypothetical protein  
362 44413 44742 330 + -4         hypothetical protein  
363 44739 44915 177 + -4         hypothetical protein  
364 45423 46229 807 + 507         hypothetical protein  
365 46214 46447 234 + -16         hypothetical protein  
366 46444 46620 177 + -4         hypothetical protein  
367 46623 46934 312 + 2         hypothetical protein  
368 46931 47158 228 + -4         hypothetical protein  
369 47155 47298 144 + -4         hypothetical protein  
370 47637 48044 408 + 338         hypothetical protein  
371 48590 48853 264 + 545         hypothetical protein  
372 48946 49308 363 + 92         hypothetical protein  
373 49322 50935 1614 + 13         gp2, terminase  
374 50957 52363 1407 + 21         hypothetical protein  
375 52360 53106 747 + -4         Putative prohead protease  
376 53121 54323 1203 + 14         Phage major capsid protein #Fam0024  
377 54332 54679 348 + 8         hypothetical protein  
378 54682 55212 531 + 2         hypothetical protein  
379 55209 55607 399 + -4         hypothetical protein  
380 55612 55899 288 + 4         hypothetical protein  
381 55899 56330 432 + -1         hypothetical protein  

Annotation History   /   View All Related Annotations Help on Annotations



  Subsystems in Which This Protein Plays a Role

This PEG is currently not present in any subsytem.

  Protein Sequence

>fig|1074482.3.peg.373 gp2, terminase
MAAENLTVFGAIDDERHGVTLPRIFTPPLRPLTKETSNGFAVIAFAEIMLHVHLYPWQQW
LLVHALELLEDGSYRFRKVIVLVARQNGKTTLMGVLAAWWLFVDSNKHPDRVPPVKFLVV
GAAQTLDNAKGPYNQVKEWCNPQPSTDEEADLVIPDLAAMTQKFVNTNGEEAIITRSKAR
YIVRADKNIRAKSAARVVFDELREQHNDDGWNAVSQTTKAVWSSQLWGISNAGDYRSVAL
RKQVDKGRKLVDEWTRLSADGGNPADVFTSGEQDGSFGYFEWSAPDKCPVDDADAIRHAN
PSLGYGPMTVMSVRSDIDGMTEAAFRTEVLCQWVTADIIPFIGPKMWASGIDSRSTIPDG
NRVVLSVDTSADRKTTYVAAAGIRADGLPHVELIARRDGMLWVPHYLDLLQERWPHITEI
AVQGKGCPAVDFIDPLTEKGWTVHLIEGFRLGACCGRFHDRVREGKLRHLPQPAVEQQVS
VAVSRRLGEVEVWDRTKSALQISGLVAESQALYALETMQAGAETPKYAPSVGVRVRF

MD5 = 917fe288305a195b88c85474fb112c0b


  DNA Sequence

>fig|1074482.3.peg.373 gp2, terminase
atggcggcggagaatctcacggttttcggtgccatcgacgatgagaggcatggtgtgacc
ttgccgcgtatcttcacgccgccgctcaggccgttgaccaaggagacctcgaatggtttc
gcggtgatcgcgttcgcggagatcatgctgcatgtgcatctctacccgtggcagcagtgg
ctgctcgtccatgcgctcgaactgctggaggatggttcgtatcgtttccgcaaggtgatt
gtgcttgtcgcccgccagaatggcaagaccacgctcatgggcgtgctggccgcatggtgg
ctgttcgtcgattccaacaagcatcccgaccgggttccgcccgtcaaattcctcgtggtc
ggtgctgcgcagacgttggacaatgcgaagggcccgtacaatcaggtcaaggagtggtgc
aatcctcagccttctaccgatgaggaagcggatctggtgattccggatcttgccgcgatg
acgcagaaattcgtcaacactaacggcgaggaagcgatcatcacccgctcgaaagcccgg
tatatcgtccgcgccgataagaacattcgagcgaaatcggccgcccgtgtcgtgttcgac
gagctgcgtgagcagcataatgatgatggctggaatgccgtcagccagaccacgaaggcc
gtgtggtcgagccagttgtggggcatttccaatgctggcgactacaggtctgtggcgttg
cgcaagcaggtggacaaggggcgcaagcttgtagacgagtggacgcgcctgagcgccgac
ggtggaaatccggccgacgtgttcacgtccggcgagcaggacggatcgttcggctatttc
gagtggtctgcgcctgacaagtgtccggtggatgatgccgacgccatccggcatgcgaat
ccgtcgctcggctatgggccgatgaccgtcatgtcggttcggtccgacattgacggcatg
accgaggccgcgttccgcaccgaggtcctgtgccagtgggtcacggctgacatcattcct
ttcatcggtccgaaaatgtgggccagtggcatcgactcgcgttccacgatccctgacggt
aatcgtgtcgtcctgtccgtggacacgtctgccgaccgtaagaccacgtatgtggccgcc
gccggaattcgtgcggacggtttgccgcacgtggagctgatagcccgccgtgacggcatg
ctgtgggtgccgcattatctcgaccttttgcaggagcgttggccgcatatcacggagatc
gccgtgcagggcaagggttgtccggcagtggacttcatcgacccgctgaccgaaaaaggg
tggacggtgcatctcatcgaaggattccggctgggcgcgtgctgcgggcgtttccacgac
cgtgtgcgtgagggcaagctgcggcatctcccgcagcctgcagtcgaacagcaggtgagt
gtggccgtgtcccgaaggctcggcgaggtcgaggtgtgggaccgcaccaagtccgcattg
cagatttccggcttggtcgccgaatcgcaggcattgtatgcgttggagacaatgcaggcc
ggagccgagacaccgaaatacgcgccgagcgtcggcgtaagggttagattctga


  DNA with Flanking Sequence

>fig|1074482.3.peg.373 gp2, terminase
accccgacgaggtaggggcggtgaaatcctgaaaacagagcaaccacgcaacactgcccg
cgtggttgctcttcctctccccgatgatgttttttgttgatgggtcgcgcgtgaaggagg
ctttatggcagttaagaagggtgtttccgagcgtcgtttcccgcatgagtccgtggctga
tgcgttggagaggtctttgcgtaatgcgaagtcgttgcgtgccgagaatgcggctgtcgt
ggccgctgcgcgtatccttgccaaccggattgattcgatttgcgagactggtttcattga
cgagaacgggaaattggacaatgtgtcggttccgacgtttttgaaatactgccagtcgct
tggtttgacggtggatgttccggctaaggttggtcggcctgcgaagccgaaggccgaggc
gaagcaggagaagccgaagagcgacaaggttgtgcagatggcggatttcatgaagcgttt
cggctaggaggcggtgtctgatggcggcggagaatctcacggttttcggtgccatcgacg
atgagaggcatggtgtgaccttgccgcgtatcttcacgccgccgctcaggccgttgacca
aggagacctcgaatggtttcgcggtgatcgcgttcgcggagatcatgctgcatgtgcatc
tctacccgtggcagcagtggctgctcgtccatgcgctcgaactgctggaggatggttcgt
atcgtttccgcaaggtgattgtgcttgtcgcccgccagaatggcaagaccacgctcatgg
gcgtgctggccgcatggtggctgttcgtcgattccaacaagcatcccgaccgggttccgc
ccgtcaaattcctcgtggtcggtgctgcgcagacgttggacaatgcgaagggcccgtaca
atcaggtcaaggagtggtgcaatcctcagccttctaccgatgaggaagcggatctggtga
ttccggatcttgccgcgatgacgcagaaattcgtcaacactaacggcgaggaagcgatca
tcacccgctcgaaagcccggtatatcgtccgcgccgataagaacattcgagcgaaatcgg
ccgcccgtgtcgtgttcgacgagctgcgtgagcagcataatgatgatggctggaatgccg
tcagccagaccacgaaggccgtgtggtcgagccagttgtggggcatttccaatgctggcg
actacaggtctgtggcgttgcgcaagcaggtggacaaggggcgcaagcttgtagacgagt
ggacgcgcctgagcgccgacggtggaaatccggccgacgtgttcacgtccggcgagcagg
acggatcgttcggctatttcgagtggtctgcgcctgacaagtgtccggtggatgatgccg
acgccatccggcatgcgaatccgtcgctcggctatgggccgatgaccgtcatgtcggttc
ggtccgacattgacggcatgaccgaggccgcgttccgcaccgaggtcctgtgccagtggg
tcacggctgacatcattcctttcatcggtccgaaaatgtgggccagtggcatcgactcgc
gttccacgatccctgacggtaatcgtgtcgtcctgtccgtggacacgtctgccgaccgta
agaccacgtatgtggccgccgccggaattcgtgcggacggtttgccgcacgtggagctga
tagcccgccgtgacggcatgctgtgggtgccgcattatctcgaccttttgcaggagcgtt
ggccgcatatcacggagatcgccgtgcagggcaagggttgtccggcagtggacttcatcg
acccgctgaccgaaaaagggtggacggtgcatctcatcgaaggattccggctgggcgcgt
gctgcgggcgtttccacgaccgtgtgcgtgagggcaagctgcggcatctcccgcagcctg
cagtcgaacagcaggtgagtgtggccgtgtcccgaaggctcggcgaggtcgaggtgtggg
accgcaccaagtccgcattgcagatttccggcttggtcgccgaatcgcaggcattgtatg
cgttggagacaatgcaggccggagccgagacaccgaaatacgcgccgagcgtcggcgtaa
gggttagattctgattttccaagagaggagagtgaatgggtttccttgacaggctcctca
gcaataacgccgcaaccgtgggcatgaagatggccgaggccgtcgagcatcccatgccgg
ccacgagcatcccgctcgtcaacggtgattgctggccgtccgacatggacttctacgggg
acgcttccggcatctactgccgtgagtacgcggtgcgtgtcgtgatcgacttcatcaccc
gcaatatcgcctcgctgccattcaaggtgtatcgaaagaacgctgatggtgactccgagg
aggtcaccagtggagcgttggccgacctgatgaagcgtccttcgccattgccgggcatga
cgcgctatcggttccttagcatgctgcttcgtgacatgctgctcgatgaccggtggcttt
gcctgcttggtgtgaatggtggccgtttcgcgctccgtcgcataccatccgactgctatc
agctggctggtaacgctttcggcgagattaccgg


  Assignments for Essentially Identical Proteins

No essentially identical proteins found

  Links to Related Entries in Other Sites

This PEG has no links.
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  Functional Coupling

Score Peg Function


  Attributes

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  Protein Families

No protein families found

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