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SEED version cvs.1555556707 (3/17/2019 22:5:7) on aspen.cels.anl.gov
 The SEED


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Protein fig|1074482.3.peg.368: Bifidobacterium breve DPC 6330

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NCBI Taxonomy Id: 1074482

Current Assignment: hypothetical protein
Translate Function Assignments


Context on contig AFXX01000010 from base 41401 to 52363 (10963 bp)

Fid Start End Size
(nt)		   Gap Find
best
clusters		 Pins Fc-sc SS Ev Function Aliases
354 41401 42246 846 +           Recombinational DNA repair protein RecT (prophage associated)  
355 42246 42416 171 + -1         hypothetical protein  
356 42416 42916 501 + -1         Single-stranded DNA-binding protein  
357 42916 43059 144 + -1         hypothetical protein  
358 43046 43438 393 + -14         hypothetical protein  
359 43441 43944 504 + 2         hypothetical protein  
360 43941 44138 198 + -4         hypothetical protein  
361 44135 44416 282 + -4         hypothetical protein  
362 44413 44742 330 + -4         hypothetical protein  
363 44739 44915 177 + -4         hypothetical protein  
364 45423 46229 807 + 507         hypothetical protein  
365 46214 46447 234 + -16         hypothetical protein  
366 46444 46620 177 + -4         hypothetical protein  
367 46623 46934 312 + 2         hypothetical protein  
368 46931 47158 228 + -4         hypothetical protein  
369 47155 47298 144 + -4         hypothetical protein  
370 47637 48044 408 + 338         hypothetical protein  
371 48590 48853 264 + 545         hypothetical protein  
372 48946 49308 363 + 92         hypothetical protein  
373 49322 50935 1614 + 13         gp2, terminase  
374 50957 52363 1407 + 21         hypothetical protein  

Annotation History   /   View All Related Annotations Help on Annotations


  Subsystems in Which This Protein Plays a Role

This PEG is currently not present in any subsytem.

  Protein Sequence

>fig|1074482.3.peg.368 hypothetical protein
MMDGIGTLDTSIWSGYIVRPKGDMRLYTCRVYETLQEASDVAQERADSRHRPYEVRVTCD
TSQRIIKTFKPRKSK

MD5 = a081ebb3058a9f343ca416d08fed729d


  DNA Sequence

>fig|1074482.3.peg.368 hypothetical protein
atgatggacggcattggcacgttggacacaagcatctggtccggctacatcgtccgcccg
aagggtgatatgagactgtatacatgccgagtgtacgaaacgctccaagaggcatcggat
gtggcgcaggagcgcgccgactcccgccacaggccatacgaggtgcgcgtaacctgcgat
acttcgcagcgaatcatcaagaccttcaaaccaaggaaaagcaaatga


  DNA with Flanking Sequence

>fig|1074482.3.peg.368 hypothetical protein
gcaaggacacgaaatgagaaacgacgaaccgaaaaccatgtacagccatgaacgattgga
acacgagcgccgcaaggcatggagcgaaggctatgccgccggttggaaagaccaggaatg
cgacttcccgcaatatacaagcgaaaacccatacaaggagaccgtcaaaatcgaaaagga
aggaaagtaatcatggaacacatcgtgcagttcgccatcggcatcgacgacaaggccatt
cagaaccgcatcgaggaacacgcctacagtgacgtgctcgacaagctcaccaaaaacgcc
gtggacagtgttttcgcgcacaccaacgcgtattcgcgggaaaacatgtggaatggattg
ctgggggccgctttgcaaagcttcctcgaagaacgcaaggacgagatcatcgacaaggcc
gcgaacatgctcgccgaccggttccaacgaacgaagaaatatcgggaagccatgggcgct
gtcatcgaaaaggacggtgaatgatggacggcattggcacgttggacacaagcatctggt
ccggctacatcgtccgcccgaagggtgatatgagactgtatacatgccgagtgtacgaaa
cgctccaagaggcatcggatgtggcgcaggagcgcgccgactcccgccacaggccatacg
aggtgcgcgtaacctgcgatacttcgcagcgaatcatcaagaccttcaaaccaaggaaaa
gcaaatgaagaaaatactcgaaaacatgatcatcaaatggcatcgagccggatacacgct
cgacgagatcgcgccactcgtgccgcaagtgcccaaagccgcaatcgcggccatcatcca
ccagcacgacaaggagaccagactttgaccgactgccagcactgccacaagcccacgaag
caggcggacaatccactctgccagcactgccgcgaagactactggcagctcatccaccaa
ctcggacacacccaactaccaaccctgcgaagcatcatgctccgacaagcccacatcgga
accccggaacacacgccaaaccgaggaaacgcgccactcccgatcgacacccgcgcacaa
gacctcatcgaagaatcggaagcatggctcgccgaacaagcaggcaaaatcagagcggca
tacgctggatacgactggcggaaagcatggttcgccatcatcagcaacaaacacaccata
ttgacgatgaacaccgcagcagacgact


  Assignments for Essentially Identical Proteins

No essentially identical proteins found

  Links to Related Entries in Other Sites

This PEG has no links.
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  Functional Coupling

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  Attributes

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  Protein Families

No protein families found

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