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SEED version cvs.1555556707 (3/17/2019 22:5:7) on gum.mcs.anl.gov
 The SEED


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Protein fig|1074482.3.peg.365: Bifidobacterium breve DPC 6330

This feature in The SEED Viewer

NCBI Taxonomy Id: 1074482

Current Assignment: hypothetical protein
Translate Function Assignments


Context on contig AFXX01000010 from base 40436 to 52363 (11928 bp)

Fid Start End Size
(nt)		   Gap Find
best
clusters		 Pins Fc-sc SS Ev Function Aliases
353 40436 41398 963 +           hypothetical protein  
354 41401 42246 846 + 2         Recombinational DNA repair protein RecT (prophage associated)  
355 42246 42416 171 + -1         hypothetical protein  
356 42416 42916 501 + -1         Single-stranded DNA-binding protein  
357 42916 43059 144 + -1         hypothetical protein  
358 43046 43438 393 + -14         hypothetical protein  
359 43441 43944 504 + 2         hypothetical protein  
360 43941 44138 198 + -4         hypothetical protein  
361 44135 44416 282 + -4         hypothetical protein  
362 44413 44742 330 + -4         hypothetical protein  
363 44739 44915 177 + -4         hypothetical protein  
364 45423 46229 807 + 507         hypothetical protein  
365 46214 46447 234 + -16         hypothetical protein  
366 46444 46620 177 + -4         hypothetical protein  
367 46623 46934 312 + 2         hypothetical protein  
368 46931 47158 228 + -4         hypothetical protein  
369 47155 47298 144 + -4         hypothetical protein  
370 47637 48044 408 + 338         hypothetical protein  
371 48590 48853 264 + 545         hypothetical protein  
372 48946 49308 363 + 92         hypothetical protein  
373 49322 50935 1614 + 13         gp2, terminase  
374 50957 52363 1407 + 21         hypothetical protein  

Annotation History   /   View All Related Annotations Help on Annotations


  Subsystems in Which This Protein Plays a Role

This PEG is currently not present in any subsytem.

  Protein Sequence

>fig|1074482.3.peg.365 hypothetical protein
MPTNITQKNKTLHEIIDWCTDLANELCDAPDGDFYANINANLIKADTLAMVIRHCQHMLD
HPDTMPDETPNQSKDTK

MD5 = 2a1ea2a51f57c0fd51fd68090c91368b


  DNA Sequence

>fig|1074482.3.peg.365 hypothetical protein
atgcccacgaacataacccagaaaaacaaaaccctgcacgaaatcatcgactggtgcacc
gacctcgccaacgagctttgcgacgcaccggacggcgacttctacgccaacatcaacgcc
aacctcataaaggcagacacactggcgatggtcatacgccattgccagcacatgctcgac
catcccgacaccatgccggacgagacaccgaaccaaagcaaggacacgaaatga


  DNA with Flanking Sequence

>fig|1074482.3.peg.365 hypothetical protein
gccaaacgcaagcgtgagcgcgaacggtattctgccgaaagtctgccggcagaaagtgcg
cagactgccggcagaatcgaaacagaatcgggacaaacaccagaacaccagaacaccaga
acaccaaagaaagagaaagaagaatattcttcttctttctccaaagaaaccggcgtgaag
gatttcggcgaatcgcgggagtgcgtcgaaaccgacaagacactggccgtggaatatccg
aacctcgacctcgaatccgcatggctcgcattcgcaggccgccaccaacacgaaacacgc
accattaacgactggacacgccaatggaaaggctggtgccaacgccgcgccaacatgagc
ggcatcccaccctcgaaacgccacatacacacgtggcaatgcgaacacgtcctgcaagcg
ctcggacgcgacaaggaaaccgcccaaccagacgaaacagcatgcacgctcgccgccgaa
ctcaaccggaaggaaaaaccatgcccacgaacataacccagaaaaacaaaaccctgcacg
aaatcatcgactggtgcaccgacctcgccaacgagctttgcgacgcaccggacggcgact
tctacgccaacatcaacgccaacctcataaaggcagacacactggcgatggtcatacgcc
attgccagcacatgctcgaccatcccgacaccatgccggacgagacaccgaaccaaagca
aggacacgaaatgagaaacgacgaaccgaaaaccatgtacagccatgaacgattggaaca
cgagcgccgcaaggcatggagcgaaggctatgccgccggttggaaagaccaggaatgcga
cttcccgcaatatacaagcgaaaacccatacaaggagaccgtcaaaatcgaaaaggaagg
aaagtaatcatggaacacatcgtgcagttcgccatcggcatcgacgacaaggccattcag
aaccgcatcgaggaacacgcctacagtgacgtgctcgacaagctcaccaaaaacgccgtg
gacagtgttttcgcgcacaccaacgcgtattcgcgggaaaacatgtggaatggattgctg
ggggccgctttgcaaagcttcctcgaagaacgcaaggacgagatcatcgacaaggccgcg
aacatgctcgccgaccggttccaacgaacgaagaaatatcgggaagccatgggcgctgtc
atcgaaaaggacggtgaatgatggacggcattgg


  Assignments for Essentially Identical Proteins

No essentially identical proteins found

  Links to Related Entries in Other Sites

This PEG has no links.
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  Functional Coupling

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  Attributes

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  Protein Families

No protein families found

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