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SEED version cvs.1555556707 (3/17/2019 22:5:7) on gum.mcs.anl.gov
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Protein fig|1074482.3.peg.361: Bifidobacterium breve DPC 6330

This feature in The SEED Viewer

NCBI Taxonomy Id: 1074482

Current Assignment: hypothetical protein
Translate Function Assignments



Context on contig AFXX01000010 from base 38472 to 50935 (12464 bp)

Fid Start End Size
(nt)
  Gap Find
best
clusters
Pins Fc-sc SS Ev Function Aliases
349 38472 39251 780 +           Phage antirepressor protein  
350 39244 39465 222 + -8         hypothetical protein  
351 39637 40284 648 + 171         hypothetical protein  
352 40281 40439 159 + -4         hypothetical protein  
353 40436 41398 963 + -4         hypothetical protein  
354 41401 42246 846 + 2         Recombinational DNA repair protein RecT (prophage associated)  
355 42246 42416 171 + -1         hypothetical protein  
356 42416 42916 501 + -1         Single-stranded DNA-binding protein  
357 42916 43059 144 + -1         hypothetical protein  
358 43046 43438 393 + -14         hypothetical protein  
359 43441 43944 504 + 2         hypothetical protein  
360 43941 44138 198 + -4         hypothetical protein  
361 44135 44416 282 + -4         hypothetical protein  
362 44413 44742 330 + -4         hypothetical protein  
363 44739 44915 177 + -4         hypothetical protein  
364 45423 46229 807 + 507         hypothetical protein  
365 46214 46447 234 + -16         hypothetical protein  
366 46444 46620 177 + -4         hypothetical protein  
367 46623 46934 312 + 2         hypothetical protein  
368 46931 47158 228 + -4         hypothetical protein  
369 47155 47298 144 + -4         hypothetical protein  
370 47637 48044 408 + 338         hypothetical protein  
371 48590 48853 264 + 545         hypothetical protein  
372 48946 49308 363 + 92         hypothetical protein  
373 49322 50935 1614 + 13         gp2, terminase  

Annotation History   /   View All Related Annotations Help on Annotations



  Subsystems in Which This Protein Plays a Role

This PEG is currently not present in any subsytem.

  Protein Sequence

>fig|1074482.3.peg.361 hypothetical protein
MSAAETDEKTLPMTDTHYAVSIRRIYDAHTDMLKGYKLILWEMQEKARIAVAARDYPTGM
LEPIPQQTLDDADTLARIFQCKNYRNDETEMWE

MD5 = 3503197605d268c584c7b297cf485d78


  DNA Sequence

>fig|1074482.3.peg.361 hypothetical protein
atgagcgcagcggaaaccgatgaaaaaacactgcctatgactgatacgcactatgcagtc
agcatcaggagaatctacgacgcgcataccgacatgctcaaggggtacaagctgatcctc
tgggaaatgcaggaaaaagcccggatagctgtagcggcacgcgactatccgaccggaatg
ctcgaaccgataccgcaacaaacgttggatgatgctgacacgttagcacgcatattccaa
tgcaagaactacaggaacgacgaaacggagatgtgggaatga


  DNA with Flanking Sequence

>fig|1074482.3.peg.361 hypothetical protein
ctccatgccgtccgaggtgccgaatcaaagcgaggacacgaaaaagagcagtgtgtcaga
actcctcccgcatgacatgggtctgcgcgtggaacttgatacgaacgaaacatactacct
gaaaagcgggtgggcggaacgctgtgacgggatttatgggcttgcttgcggatacgtgca
ttatgccgaaggcattacgtggtttaaagatccggctcgcatcgcgatcatgaacagcca
cgtgaagctggcagtcccattcgatgaacatgaaaccgaaaccaccaagcaaagcgagga
cgcgaaatgacgattgacgaactgcatgattactgccgttacctcttcgacgagaaccat
gtgcatggcgtgcctgacaagtggagcgaaggctacgagttcgcgctcagccttgtcatg
ttcaagtgccatgagggattaacagacgaagaccgtcagagaatcgccgactggcgtgaa
aaacattggaaggacacgaaatgagcgcagcggaaaccgatgaaaaaacactgcctatga
ctgatacgcactatgcagtcagcatcaggagaatctacgacgcgcataccgacatgctca
aggggtacaagctgatcctctgggaaatgcaggaaaaagcccggatagctgtagcggcac
gcgactatccgaccggaatgctcgaaccgataccgcaacaaacgttggatgatgctgaca
cgttagcacgcatattccaatgcaagaactacaggaacgacgaaacggagatgtgggaat
gagtatcgcggatgatgaagctgagaaggcgtatccgacccgccactgggatggaacgca
tgtcaaggaacagttttgctgcgacacggacgatttgcaggaagcatacctgcgcggtcg
caacgcgccacccacgaatgccgagatagaggccgtggcgaaaagactgtgctacctctc
acaaccgccactctggttcccgaccgagccgccagccgaacaagagaagaacctatggcg
gaacatgggcatgtgcgacgcgcaagacgaatggcttgacaaggcacgagacctgctcga
aaccgcacggaaggcggtaaacgaatgagcaagacgatcaagtatgtggaatgcgcccac
tgcggcgagaccgtcggcacatattacgtgacatgcccctactgcgggtacaagctggcc
atgcgcaggccgacaactggcatggacccgctgtatggcatgaccgacgacgaattctac
cgagggctcgggagcatgtgat


  Assignments for Essentially Identical Proteins

No essentially identical proteins found

  Links to Related Entries in Other Sites

This PEG has no links.
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  Functional Coupling

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  Attributes

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  Protein Families

No protein families found

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