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SEED version cvs.1555556707 (3/17/2019 22:5:7) on aspen.cels.anl.gov
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Protein fig|1074482.3.peg.355: Bifidobacterium breve DPC 6330

This feature in The SEED Viewer

NCBI Taxonomy Id: 1074482

Current Assignment: hypothetical protein
Translate Function Assignments



Context on contig AFXX01000010 from base 38188 to 47298 (9111 bp)

Fid Start End Size
(nt)
  Gap Find
best
clusters
Pins Fc-sc SS Ev Function Aliases
348 38188 38475 288 +           type II DNA modification methyltransferase, putative  
349 38472 39251 780 + -4         Phage antirepressor protein  
350 39244 39465 222 + -8         hypothetical protein  
351 39637 40284 648 + 171         hypothetical protein  
352 40281 40439 159 + -4         hypothetical protein  
353 40436 41398 963 + -4         hypothetical protein  
354 41401 42246 846 + 2         Recombinational DNA repair protein RecT (prophage associated)  
355 42246 42416 171 + -1         hypothetical protein  
356 42416 42916 501 + -1         Single-stranded DNA-binding protein  
357 42916 43059 144 + -1         hypothetical protein  
358 43046 43438 393 + -14         hypothetical protein  
359 43441 43944 504 + 2         hypothetical protein  
360 43941 44138 198 + -4         hypothetical protein  
361 44135 44416 282 + -4         hypothetical protein  
362 44413 44742 330 + -4         hypothetical protein  
363 44739 44915 177 + -4         hypothetical protein  
364 45423 46229 807 + 507         hypothetical protein  
365 46214 46447 234 + -16         hypothetical protein  
366 46444 46620 177 + -4         hypothetical protein  
367 46623 46934 312 + 2         hypothetical protein  
368 46931 47158 228 + -4         hypothetical protein  
369 47155 47298 144 + -4         hypothetical protein  

Annotation History   /   View All Related Annotations Help on Annotations



  Subsystems in Which This Protein Plays a Role

This PEG is currently not present in any subsytem.

  Protein Sequence

>fig|1074482.3.peg.355 hypothetical protein
MDEKIRKYLQWLDSKCAEAERAKELCLDFSYDDGRGDAYGRAKGEFIHIFDVKDGE

MD5 = c77dc6f918019f5f9cb4a7d5516b9085


  DNA Sequence

>fig|1074482.3.peg.355 hypothetical protein
atggacgagaagattcgcaagtacctgcaatggctggacagtaagtgcgccgaagctgaa
agagctaaggaattgtgcctggacttctcttacgacgatgggcgtggggacgcttacggc
agggcaaaaggtgaattcatacacatcttcgacgtgaaggatggtgagtga


  DNA with Flanking Sequence

>fig|1074482.3.peg.355 hypothetical protein
atcgacctggcgcgccgcagcggccagctcgtggacatcagcgcccgagccgtacaccag
ggagacgaattctcctacagttatggtctcaacgaggatttgcgccacgtgccatgcgcc
aaccccggcgaactgacccacgtgtacatggtcgcgcatttcaaggacggtggccactac
ttcctcgttctgaaccgtcaggagatcgagcaggcgagggcgcgcagcaagagcggtaat
ttcggcccgtggaagaccgattacgaggccatggcgaagaagaccgccatccgtcgcgcg
gcaccgtacctgcctttgaccgtgcaggcgcagaccgccgccgccaatgacgacaccacg
cccgattacggcgatgtgttccagccggtgcttgaggatgacggcaccgatgaagccgac
gacgtgaccgccgaagtcctggagccggacatgtcggacaccggcgccgagcctgagacg
gaagcaaaggacggtgagtgatggacgagaagattcgcaagtacctgcaatggctggaca
gtaagtgcgccgaagctgaaagagctaaggaattgtgcctggacttctcttacgacgatg
ggcgtggggacgcttacggcagggcaaaaggtgaattcatacacatcttcgacgtgaagg
atggtgagtgatggccggagagaccgttatcacgatcgtcggcaatctgaccgccgaccc
ggaaacccgcacgactcagaatggtggcacggtctgcaatttcaccatcgccagcacgcc
acgccaatacaacagccagtccggccagtgggaggacggtccagcgttgttcctccgctg
cgccgcttggcgtgacctcgccgcgcattgcgcgcagagcctgtcgaagggcatgcgcgt
gatcgcgcagggacggttgcggcaacactcctatcaagctcaggatggctccaaccgcat
cgtgatcgagatgcaggtggacgagatcggcccgtccctgcggtacgcgaccgcgcaggt
cacgcgcgccgacagccaacgggccacgcgcccccaacccacgggacaacgggccgactc
gccagcgaccgacccgtgggccgccgaccgcgccgccggtggtggcgcgacagcgactga
cccgtgggcggacgcggacggtgaattctga


  Assignments for Essentially Identical Proteins

No essentially identical proteins found

  Links to Related Entries in Other Sites

This PEG has no links.
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  Functional Coupling

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  Attributes

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  Protein Families

No protein families found

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