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SEED version cvs.1555556707 (3/17/2019 22:5:7) on gum.mcs.anl.gov
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Protein fig|1074482.3.peg.353: Bifidobacterium breve DPC 6330

This feature in The SEED Viewer

NCBI Taxonomy Id: 1074482

Current Assignment: hypothetical protein
Translate Function Assignments


Context on contig AFXX01000010 from base 35330 to 46447 (11118 bp)

Fid Start End Size
(nt)		   Gap Find
best
clusters		 Pins Fc-sc SS Ev Function Aliases
343 35611 35330 282 -           hypothetical protein  
344 35809 35937 129 + 197         hypothetical protein  
345 36000 36173 174 + 62         hypothetical protein  
346 36539 36976 438 + 365         methyltransferase, putative  
347 36973 37182 210 + -4         hypothetical protein  
348 38188 38475 288 + 1005         type II DNA modification methyltransferase, putative  
349 38472 39251 780 + -4         Phage antirepressor protein  
350 39244 39465 222 + -8         hypothetical protein  
351 39637 40284 648 + 171         hypothetical protein  
352 40281 40439 159 + -4         hypothetical protein  
353 40436 41398 963 + -4         hypothetical protein  
354 41401 42246 846 + 2         Recombinational DNA repair protein RecT (prophage associated)  
355 42246 42416 171 + -1         hypothetical protein  
356 42416 42916 501 + -1         Single-stranded DNA-binding protein  
357 42916 43059 144 + -1         hypothetical protein  
358 43046 43438 393 + -14         hypothetical protein  
359 43441 43944 504 + 2         hypothetical protein  
360 43941 44138 198 + -4         hypothetical protein  
361 44135 44416 282 + -4         hypothetical protein  
362 44413 44742 330 + -4         hypothetical protein  
363 44739 44915 177 + -4         hypothetical protein  
364 45423 46229 807 + 507         hypothetical protein  
365 46214 46447 234 + -16         hypothetical protein  

Annotation History   /   View All Related Annotations Help on Annotations


  Subsystems in Which This Protein Plays a Role

This PEG is currently not present in any subsytem.

  Protein Sequence

>fig|1074482.3.peg.353 hypothetical protein
MKRIPLKDTERYTIERFRQCKKTERHLAWLKSRKAGVGGSDMSTILGLNSFKTPYELWLE
KTGRVEPEDISDKWAIVKGNALENELRKRFRANHPEMLVTDGTDKQFIMRGKPYLRASLD
GILQGEDGSFGILEIKTASNRRAGDWHDEDGSLRIPPYYLAQVEFYALVTGWTWGVVYAA
IGDDEPVEIPFKADVEDMGAIDKAAADFWRFVTTGTPPQLTGGDVQKAFPEPAPDIVDES
DDDDLYDLLARYESTSNRAKELKNEQKALQEQIIVRIGSHTGVRCGNLQATYKPTTRKEY
VVKATTYRKFAFKSTEEKEQ

MD5 = 5a7ff84bd1381401f867fa08dce53251


  DNA Sequence

>fig|1074482.3.peg.353 hypothetical protein
atgaaacgtatcccactcaaggacacggaacgctacacgattgaacggttccggcagtgc
aagaagacggaacgtcatctcgcgtggttgaaaagccgtaaggcgggtgtgggcggttcc
gacatgagcacgatcctcggcctgaattccttcaagacaccgtacgaattgtggcttgag
aagaccggccgcgtggaaccggaggacatctcggacaagtgggcgatcgtcaagggcaat
gccttggagaacgagctcaggaagcgtttccgcgccaatcatccggaaatgctcgtcacg
gacggcaccgacaagcagttcatcatgcgcgggaagccatacctgcgcgcttcccttgac
ggcatcctgcaaggtgaggacggaagttttggaatccttgaaatcaaaacggcgagcaac
cgtcgagcgggggactggcatgacgaggacggcagcctccgaatcccaccttattatctc
gcccaagtcgagttctacgcgcttgtaacgggatggacgtggggagtcgtgtacgcggcc
atcggagacgacgagccggtagagattccgttcaaggccgacgtggaggatatgggcgcg
atcgacaaggccgcagccgacttctggcgtttcgtcaccaccggcacgccaccgcaattg
accggcggcgacgtgcagaaggcgttcccggaacccgctccggacatcgtggacgaaagc
gacgacgatgacctctacgacctgctcgcaagatacgagagcacgtccaaccgcgcgaag
gaactgaaaaacgagcagaaggcattgcaggagcagatcatcgtgcgcatcggctcgcat
acgggcgtgcgttgcggcaacctccaagccacctacaagccgacgacccgcaaggaatac
gtcgtcaaagccaccacataccgcaaattcgcattcaaatccaccgaagaaaaggagcaa
taa


  DNA with Flanking Sequence

>fig|1074482.3.peg.353 hypothetical protein
ggccttcgacaagcattcaccacgcagcaaagcacgggaaaccaccacaaccggaaagaa
gaaagaaaccatgaccaccacacagaaactcacagcgaccagcatcaccgcagagaaact
cacaccgaccggcatcaccaccggaaccatcagcgtcaggccacaagccacagccgatcc
acgcgccatcatctccaacgcattgaccggcattttcgacgcagtaagcgcattgcaacg
aaccgcattccaagccaacgacaaggtcgtctacggattcgccacgaaactcctcaacgg
cgaactcatggacctgaaagccaactactcgaaggacgtggcgaaatgagactcaatttc
aatagcaaggatggcgttttcgccatcaaagccgaaagcgaagaggaaaaagcccaactc
aaaacgtcggcacccgccatctgcaatctcatcatcgattttttcgacgctgaagtccaa
gaaatgaaggcgacgaaggaatgaaacgtatcccactcaaggacacggaacgctacacga
ttgaacggttccggcagtgcaagaagacggaacgtcatctcgcgtggttgaaaagccgta
aggcgggtgtgggcggttccgacatgagcacgatcctcggcctgaattccttcaagacac
cgtacgaattgtggcttgagaagaccggccgcgtggaaccggaggacatctcggacaagt
gggcgatcgtcaagggcaatgccttggagaacgagctcaggaagcgtttccgcgccaatc
atccggaaatgctcgtcacggacggcaccgacaagcagttcatcatgcgcgggaagccat
acctgcgcgcttcccttgacggcatcctgcaaggtgaggacggaagttttggaatccttg
aaatcaaaacggcgagcaaccgtcgagcgggggactggcatgacgaggacggcagcctcc
gaatcccaccttattatctcgcccaagtcgagttctacgcgcttgtaacgggatggacgt
ggggagtcgtgtacgcggccatcggagacgacgagccggtagagattccgttcaaggccg
acgtggaggatatgggcgcgatcgacaaggccgcagccgacttctggcgtttcgtcacca
ccggcacgccaccgcaattgaccggcggcgacgtgcagaaggcgttcccggaacccgctc
cggacatcgtggacgaaagcgacgacgatgacctctacgacctgctcgcaagatacgaga
gcacgtccaaccgcgcgaaggaactgaaaaacgagcagaaggcattgcaggagcagatca
tcgtgcgcatcggctcgcatacgggcgtgcgttgcggcaacctccaagccacctacaagc
cgacgacccgcaaggaatacgtcgtcaaagccaccacataccgcaaattcgcattcaaat
ccaccgaagaaaaggagcaataatcatgggagcaatcgcacagcaggcgcagggacagca
gatggtcgaaatgacgccgaaacaaaatctgaaaatgatgatgaagaaaagctggccgcg
catcgccagcgtcgtcggcaacaacatcagccccgaccgcctctaccagatgtgcgtgtc
cgcgatcaacaaaacgccaaaactcgcggaatgctcgccgcaaagcgtgctctcctgctt
catgacctgcagcgcgctcggattggaaccgtccaacgtggacggactgggccgcgccta
cgtgctgcccttccgcaacaagaagaccggaggcatggaggccacgttcatcatgggcta
tcgcggcatgatcgacctggcgcgccgcagcggccagctcgtggacatcagcgcccgagc
cgtacaccagggagacgaattctcctacagttatggtctcaacgaggatttgcgccacgt
gccatgcgccaaccccggcgaactgacccacgtgtacatggtc


  Assignments for Essentially Identical Proteins

No essentially identical proteins found

  Links to Related Entries in Other Sites

This PEG has no links.
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  Functional Coupling

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  Attributes

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Key
Link Explains Key		 Value


  Protein Families

No protein families found

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