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SEED version cvs.1555556707 (3/17/2019 22:5:7) on gum.mcs.anl.gov
 The SEED


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Protein fig|1074482.3.peg.350: Bifidobacterium breve DPC 6330

This feature in The SEED Viewer

NCBI Taxonomy Id: 1074482

Current Assignment: hypothetical protein
Translate Function Assignments


Context on contig AFXX01000010 from base 34317 to 44742 (10426 bp)

Fid Start End Size
(nt)		   Gap Find
best
clusters		 Pins Fc-sc SS Ev Function Aliases
340 34589 34317 273 -           hypothetical protein  
341 35022 34897 126 - 307         hypothetical protein  
342 35128 35259 132 + 105         hypothetical protein  
343 35611 35330 282 - 70         hypothetical protein  
344 35809 35937 129 + 197         hypothetical protein  
345 36000 36173 174 + 62         hypothetical protein  
346 36539 36976 438 + 365         methyltransferase, putative  
347 36973 37182 210 + -4         hypothetical protein  
348 38188 38475 288 + 1005         type II DNA modification methyltransferase, putative  
349 38472 39251 780 + -4         Phage antirepressor protein  
350 39244 39465 222 + -8         hypothetical protein  
351 39637 40284 648 + 171         hypothetical protein  
352 40281 40439 159 + -4         hypothetical protein  
353 40436 41398 963 + -4         hypothetical protein  
354 41401 42246 846 + 2         Recombinational DNA repair protein RecT (prophage associated)  
355 42246 42416 171 + -1         hypothetical protein  
356 42416 42916 501 + -1         Single-stranded DNA-binding protein  
357 42916 43059 144 + -1         hypothetical protein  
358 43046 43438 393 + -14         hypothetical protein  
359 43441 43944 504 + 2         hypothetical protein  
360 43941 44138 198 + -4         hypothetical protein  
361 44135 44416 282 + -4         hypothetical protein  
362 44413 44742 330 + -4         hypothetical protein  

Annotation History   /   View All Related Annotations Help on Annotations


  Subsystems in Which This Protein Plays a Role

This PEG is currently not present in any subsytem.

  Protein Sequence

>fig|1074482.3.peg.350 hypothetical protein
MSDDLLTPADLAAMLGMSPRTLANWRSTGKGPPYLKIGVEPPEGHQDRRKVRYQRQIAEK
WALAHKYQRTVAR

MD5 = de2fcc55e87854d17e1c1d243cafb7dd


  DNA Sequence

>fig|1074482.3.peg.350 hypothetical protein
atgagtgacgatctgctcacgccagccgaccttgccgccatgctcggcatgagcccacgc
accctcgccaactggcggagtaccggcaagggcccgccgtacttgaaaatcggcgtggaa
ccgccggaaggccatcaggacaggcgtaaggtccgctaccagcgtcaaatcgcggaaaag
tgggctttggcacacaagtaccagaggacggtggcgagatga


  DNA with Flanking Sequence

>fig|1074482.3.peg.350 hypothetical protein
taagcgttgggtgacgcatgaggtactgccccagattcgcaagaccggcggctacattcc
aaccacagacgcggatgatgacatgaccatcctcgcgaaggccgtgatgatcggccaacg
caccatggaggaacagaagcgacgcatcgccgcgcaggaatcacacatcaaagaactgga
acccaaggcacggttcgcggacgccgtggccgcgtcggacggcacgtgcctgatcgggga
actggcgaagatgctgcgtcagaacggtttggacatcggccagaaccgacttttcgagat
tcttcgacaggacgggtatctcggcaagaccggctcgaaccgcaacgtgccaacacagaa
ggccatggacttgggactgttccgaatcaaggaaaccgccatcacccattcggacggtca
cgtgaccatcaaccgcaccgcgaaggtcaccggcaaaggccagacgtacttcatcagccg
ctactgcccacgcgccgaccatgagtgacgatctgctcacgccagccgaccttgccgcca
tgctcggcatgagcccacgcaccctcgccaactggcggagtaccggcaagggcccgccgt
acttgaaaatcggcgtggaaccgccggaaggccatcaggacaggcgtaaggtccgctacc
agcgtcaaatcgcggaaaagtgggctttggcacacaagtaccagaggacggtggcgagat
gaaaaacggagtgttcgttccggtgacacggattaaaagcagtccagacgtcaaaacgac
gggaaagcacgcgtcgacaccggcaagccgaccctcacgcagcagggaatcgacgtggac
gggttcatccgcgaaaaccacgcgctcatcgaaaacttaagaaaaggaacacgttgaaac
acgaatacacggacggcgaactcgccgaactgaagaaaatctacgacgagttgggcgagg
ccggtctcgacatcacggaaatgcgggcgttacgcaagtccggactactcacgaatggcc
ttccggcgaaaccggaagcgccgtcgaaacgagacctcatcctcgcgcactgcaagaaac
gcattgaccaaggccaaccgttcgacggcaaggaaaccgccgaagcgctcaacctaagcc
agaaaacggtcggcaacattctcggccaactccgcaaggaaggactattgccggccttcg
acaagcattcaccacgcagcaa


  Assignments for Essentially Identical Proteins

No essentially identical proteins found

  Links to Related Entries in Other Sites

This PEG has no links.
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  Functional Coupling

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  Attributes

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  Protein Families

No protein families found

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