The SEED: an Annotation/Analysis Tool Provided by FIG
[ Subsystem Forum | Essentiality Data | FIG Tutorials | Peer-to-peer Updates | (New) Clearinghouse | SEED Control Panel | NMPDR | SEED Wiki]
[GOLD | "Complete" Genomes in SEED | ExPASy | IMG | KEGG | NCBI | TIGR cmr | UniProt | Report "Bugz"]

SEED version cvs.1555556707 (3/17/2019 22:5:7) on gum.mcs.anl.gov
The SEED


FIG search

CELLO predictive system

CELLO RESULTS

SeqID: fig|1074482.3.peg.343

Analysis Report:
            SVMLOCALIZATIONRELIABILITY
    Amino Acid Comp.    Periplasmic    0.432
    N-peptide Comp.    Cytoplasmic    0.724
    Partitioned seq. Comp.    Periplasmic    0.469
    Physico-chemical Comp.    Cytoplasmic    0.901
    Neighboring seq. Comp.    OuterMembrane    0.755

CELLO Prediction:
     Cytoplasmic    2.074  *
     Periplasmic    1.223
     OuterMembrane    0.896
     Extracellular    0.546
     InnerMembrane    0.261

*********************************************************************************

[ Home | Documentation]

FIG search