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SEED version cvs.1555556707 (3/17/2019 22:5:7) on gum.mcs.anl.gov
 The SEED


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Protein fig|1074482.3.peg.340: Bifidobacterium breve DPC 6330

This feature in The SEED Viewer

NCBI Taxonomy Id: 1074482

Current Assignment: hypothetical protein
Translate Function Assignments


Context on contig AFXX01000010 from base 29051 to 39465 (10415 bp)

Fid Start End Size
(nt)		   Gap Find
best
clusters		 Pins Fc-sc SS Ev Function Aliases
336 29051 30223 1173 +       2: 3 1   UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227)  
337 30326 31864 1539 + 102     5: 5 1 6 4 2   UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8)  
338 31924 32898 975 + 59         Cell division protein FtsQ homolog  
339 34056 33568 489 - 669         hypothetical protein  
340 34589 34317 273 - 260         hypothetical protein  
341 35022 34897 126 - 307         hypothetical protein  
342 35128 35259 132 + 105         hypothetical protein  
343 35611 35330 282 - 70         hypothetical protein  
344 35809 35937 129 + 197         hypothetical protein  
345 36000 36173 174 + 62         hypothetical protein  
346 36539 36976 438 + 365         methyltransferase, putative  
347 36973 37182 210 + -4         hypothetical protein  
348 38188 38475 288 + 1005         type II DNA modification methyltransferase, putative  
349 38472 39251 780 + -4         Phage antirepressor protein  
350 39244 39465 222 + -8         hypothetical protein  

Annotation History   /   View All Related Annotations Help on Annotations


  Subsystems in Which This Protein Plays a Role

This PEG is currently not present in any subsytem.

  Protein Sequence

>fig|1074482.3.peg.340 hypothetical protein
MSVDVLVYGAVLGYGENDMIRVYVDGPHDEIDGVFPIMAKTLDPSLSDQDIQSQLAKEYP
SNDLVYAETHKLIESAYIDGDHAFLDAKIN

MD5 = 3ea89ce34a1f7255585faadaabe1e6c1


  DNA Sequence

>fig|1074482.3.peg.340 hypothetical protein
ttgtcggtggacgtattggtctatggcgcagtgcttggatacggggagaacgatatgatc
cgcgtctacgtcgatgggccgcatgatgagatcgacggcgtattccccatcatggcgaag
acgcttgatccgtcgctctccgatcaggacatccaaagtcagctggcgaaggagtatccg
tccaatgatcttgtttacgccgagacgcataagttgatcgagagcgcttatatcgatggc
gatcatgcgtttcttgatgcgaaaatcaactag


  DNA with Flanking Sequence

>fig|1074482.3.peg.340 hypothetical protein
acgacggacgagatggcagaccgcgcgcctgctcatcgacccggcagaactagcattggc
ggaacgcatgtacgacgatgacctatggtcgatagccgatgaactcaacgtgaccacgca
ggtgctcacggactaccgagccacgctcaacacatcgccaaacagaatcaaagaaaggtt
tttcaatgcgtaagaaaatcattgccatcacagcggcgacgcttctcctggcgacggcct
gtggctgcggaagccagcaggagccggcccccacgacggccaagacgccggacgtcagcg
cacagcaggagaagccacaacaacaggcagccgagaagacggcgcagagctttgtggatg
agttcaacgcgaactcctcgacaccgataaccgacgtcgagaaattcacgccgagtgatg
cgaacggcccctattatcggacggagtatcgcaccggcgctttctccgacgcggacgcgc
tccacggaaagctaggtcaattgtcggtggacgtattggtctatggcgcagtgcttggat
acggggagaacgatatgatccgcgtctacgtcgatgggccgcatgatgagatcgacggcg
tattccccatcatggcgaagacgcttgatccgtcgctctccgatcaggacatccaaagtc
agctggcgaaggagtatccgtccaatgatcttgtttacgccgagacgcataagttgatcg
agagcgcttatatcgatggcgatcatgcgtttcttgatgcgaaaatcaactagcggcacc
ttataagaagaatgttaaaacttgtagagtcttatatatgtgtaattgagattacatcat
tcttagggattctattacttcaaattctctccgttgtgtaatttgacttccccgctggaa
tgtgcttataattccggcaacaaaagaaaaggcccttgggactgttccagagtcccaagg
gcagacggaaaaccagctagattctccatgcaccagcatactgcaaggcgtggagggaaa
gacgttggaagagatgggataccagaacgcgcaagccgtatacgacatcagccgcaccgg
aagactggcgaaaaaacgcggagaaaacctcaccgtgtacgccatggcgcaacttgtgct
cggctacatggcgatcaacacctacgactgggaccgcgaacacaaccagccaccggagaa
actgcgcaaggtcaacgcgccgtgccgctactacacgctcggctggcgcgcaatagccga
cgcatacggcatg


  Assignments for Essentially Identical Proteins

No essentially identical proteins found

  Links to Related Entries in Other Sites

This PEG has no links.
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  Functional Coupling

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  Attributes

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  Protein Families

No protein families found

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