The SEED: an Annotation/Analysis Tool Provided by FIG
[ Subsystem Forum | Essentiality Data | FIG Tutorials | Peer-to-peer Updates | (New) Clearinghouse | SEED Control Panel | NMPDR | SEED Wiki] [GOLD | "Complete" Genomes in SEED | ExPASy | IMG | KEGG | NCBI | TIGR cmr | UniProt | Report "Bugz"]
|
![]() |
Fid | Start | End | Size (nt) |
Gap | Find best clusters |
Pins | Fc-sc | SS | Ev | Function | Aliases | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
333 | 25223 | 26329 | 1107 | + | ![]() |
![]() |
12 | 2: 1 5 | Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13) | |||
334 | 26385 | 27830 | 1446 | + | 55 | ![]() |
![]() |
12 | 2: 4 2 | UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9) | ||
335 | 27817 | 29034 | 1218 | + | -14 | ![]() |
![]() |
16 | Peptidoglycan glycosyltransferase FtsW (EC 2.4.1.129) | |||
336 | 29051 | 30223 | 1173 | + | 16 | ![]() |
![]() |
13 | 2: 7 1 | UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) | ||
337 | 30326 | 31864 | 1539 | + | 102 | ![]() |
![]() |
5: 8 1 3 6 2 | UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8) | |||
338 | 31924 | 32898 | 975 | + | 59 | ![]() |
![]() |
17 | Cell division protein FtsQ homolog | |||
339 | 34056 | 33568 | 489 | - | 669 | ![]() |
hypothetical protein | |||||
340 | 34589 | 34317 | 273 | - | 260 | ![]() |
hypothetical protein | |||||
341 | 35022 | 34897 | 126 | - | 307 | ![]() |
hypothetical protein | |||||
342 | 35128 | 35259 | 132 | + | 105 | ![]() |
hypothetical protein | |||||
343 | 35611 | 35330 | 282 | - | 70 | ![]() |
hypothetical protein | |||||
344 | 35809 | 35937 | 129 | + | 197 | ![]() |
hypothetical protein | |||||
345 | 36000 | 36173 | 174 | + | 62 | ![]() |
hypothetical protein | |||||
346 | 36539 | 36976 | 438 | + | 365 | ![]() |
methyltransferase, putative |
Annotation History / View All Related Annotations | Help on Annotations |
Subsystem | Curator | Role |
---|---|---|
4_4_13 | El_Yacoubi_Basma_user | UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8) |
BEY_LIP | El_Yacoubi_Basma_user | UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8) |
YggSTF | El_Yacoubi_Basma_user | UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8) |
YggS_2015 | vcrecy | UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8) |
gh_DUF179 | Hutinet_Geoffrey_user | UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8) |
Score | Peg | Function |
---|---|---|
12 | fig|1074482.3.peg.333 | Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13) |
12 | fig|1074482.3.peg.334 | UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9) |
16 | fig|1074482.3.peg.335 | Peptidoglycan glycosyltransferase FtsW (EC 2.4.1.129) |
13 | fig|1074482.3.peg.336 | UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) |
17 | fig|1074482.3.peg.338 | Cell division protein FtsQ homolog |
Key Link Explains Key |
Value |
---|
Compare Regions |
| Psi-Blast | TMpred | TMHMM | Gram negative PSORT | Gram negative SignalP | Gram positive PSORT | Gram positive SignalP | LipoP | Radar | PPSearch | Gram negative CELLO | Gram positive CELLO | ProDom | PDB | RNAFold |
> Show tool descriptions