The SEED: an Annotation/Analysis Tool Provided by FIG
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SEED version cvs.1555556707 (Wed Apr 17 22:05:07 2019) on gum.mcs.anl.gov
The SEED

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Please read the subsystem conflict resolution tutorial

Subsystems queued for installation

User ID:
Selected Subsystem Name Curator Ver # Cur Ver # Subs Out Roles Out Subs In Roles In Action
Magnetosome VeronikaV 148 162
Magnetosome VeronikaV 148 162
OF COG3236 ofrelin 113 113 30 14 45 8 Show analysis Restart analysis
mycobacteria acid response swairjo 133 133 26 14 4 3 Show analysis Restart analysis
Omega-amidase SvetaG 138 164 48 24 14 9 Show analysis Restart analysis
D-nopaline catabolic operon SvetaG 128 131 10 4 19 3 Show analysis Restart analysis
Mycobacterium virulence operon involved in an Esx-1 secretion system margovan 133 none 1 6 0 0 Show analysis Restart analysis
AOU COG3236 almudenaortiz 138 138 50 17 31 6 Show analysis Restart analysis
diegorojas S4-like diegorojas 148 none 80 23 68 9 Show analysis Restart analysis
COG3230 lilihuang 146 none 52 16 46 8 Show analysis Restart analysis
DDP1 PUTATIVE MIHIR MANDAL_MIHIR_user 112 115 6 5 2 1 Show analysis Restart analysis
At1g52510 AT4G12830 (COG0596) SvetaG 229 none 9 11 4 4 Show analysis Restart analysis
At2g23840 SvetaG 208 201 49 15 45 6 Show analysis Restart analysis
At3g21300 SvetaG 191 203 21 19 12 5 Show analysis Restart analysis
At3g50560 SvetaG 191 173 36 9 29 5 Show analysis Restart analysis
At4g10620 At3g57180 At3g47450 SvetaG 165 176 62 29 52 13 Show analysis Restart analysis
At4g17370 SvetaG 178 181 0 0 0 0 Show analysis Restart analysis
At5g47760 SvetaG 248 none 16 7 12 5 Show analysis Restart analysis
FIG039061: hypothetical protein related to heme utilization SvetaG 244 246 35 27 41 18 Show analysis Restart analysis
CFE Sulfur Oxidation cedwardson 118 130 11 20 9 17 Show analysis Restart analysis
m(6)t(6)A methlytransferase TsaA Thiaville_Patrick_user 113 118 6 3 1 1 Show analysis Restart analysis
Mycobacterial lipid and multidrug efflux system proteins MmpL, MmpS SvetaG 194 217 2 1 3 2 Show analysis Restart analysis
Cytochrome bo ubiquinol oxidase SvetaG 135 136 25 13 22 6 Show analysis Restart analysis
Heme O and Heme A biosynthesis SvetaG 152 194 25 9 21 3 Show analysis Restart analysis
Mycobacterial lipid and multidrug efflux system proteins MmpL, MmpS SvetaG 217 217 2 1 3 2 Show analysis Restart analysis
Bacterial Sphingolipids SvetaG 320 322 27 10 5 3 Show analysis Restart analysis
5-oxoprolinase TEMP SvetaG 107 113 6 3 0 0 Show analysis Restart analysis
Tripartite multidrug efflux systems (of RND type) in Pseudomonas SvetaG 263 263 14 21 0 0 Show analysis Restart analysis
Heme O and Heme A biosynthesis (with selected terminal oxidases) SvetaG 121 154 40 48 29 15 Show analysis Restart analysis
Heme and Siroheme Biosynthesis with hypotheticals SvetaG 742 752 120 77 95 28 Show analysis Restart analysis
Outer membrane porins in Pseudomonas and Acinetobacter SvetaG 292 308 1 1 0 0 Show analysis Restart analysis
Antibiotic targets in cell wall biosynthesis SvetaG 262 none Queued as job J_01936
COG0523 MTA cHaas 113 none Queued as job J_01937
DOE - COG0523 cHaas 141 none Queued as job J_01938
   

The following functionality is still experimental. It will install the selected subsystems, applying all assignments contained therein. 


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