The SEED: an Annotation/Analysis Tool Provided by FIG
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SEED version cvs.1555556707 (Wed Apr 17 22:05:07 2019) on gum.mcs.anl.gov
The SEED

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Please read the subsystem conflict resolution tutorial

Subsystems queued for installation

User ID:
Selected Subsystem Name Curator Ver # Cur Ver # Subs Out Roles Out Subs In Roles In Action
Experimental-PTPS vcrecy 241 241 110 40 100 18 Show analysis Restart analysis Queued as job J_04930
Magnetosome VeronikaV 148 162
Magnetosome VeronikaV 148 162
OF COG3236 ofrelin 113 none 93 48 57 11 Show analysis Restart analysis Queued as job J_04944
mycobacteria acid response swairjo 133 133 26 14 4 3 Show analysis Restart analysis Queued as job J_04965
Omega-amidase SvetaG 138 164 48 24 14 9 Show analysis Restart analysis Queued as job J_04943
D-nopaline catabolic operon SvetaG 128 131 10 4 19 3 Show analysis Restart analysis Queued as job J_04955
Mycobacterium virulence operon involved in an Esx-1 secretion system margovan 133 none 1 6 0 0 Show analysis Restart analysis Queued as job J_04952
AOU COG3236 almudenaortiz 138 138 62 21 50 8 Show analysis Restart analysis Queued as job J_04931
diegorojas S4-like diegorojas 148 none 80 23 68 9 Show analysis Restart analysis Queued as job J_04966
COG3230 lilihuang 146 none 47 14 46 8 Show analysis Restart analysis Queued as job J_04933
DDP1 PUTATIVE MIHIR MANDAL_MIHIR_user 112 115 2 2 2 1 Show analysis Restart analysis Queued as job J_04963
At1g52510 AT4G12830 (COG0596) SvetaG 229 none 9 11 4 4 Show analysis Restart analysis Queued as job J_04941
At2g23840 SvetaG 208 201 49 15 45 6 Show analysis Restart analysis Queued as job J_04957
At3g21300 SvetaG 191 203 21 19 12 5 Show analysis Restart analysis Queued as job J_04958
At3g50560 SvetaG 191 173 32 8 29 5 Show analysis Restart analysis Queued as job J_04940
At4g10620 At3g57180 At3g47450 SvetaG 165 176 69 30 52 13 Show analysis Restart analysis Queued as job J_04937
At4g17370 SvetaG 178 181 0 0 0 0 Show analysis Restart analysis Queued as job J_04953
At5g47760 SvetaG 248 none 15 6 12 5 Show analysis Restart analysis Queued as job J_04959
FIG039061: hypothetical protein related to heme utilization SvetaG 244 246 35 27 41 18 Show analysis Restart analysis Queued as job J_04945
CFE Sulfur Oxidation cedwardson 118 130 11 20 9 17 Show analysis Restart analysis Queued as job J_04961
m(6)t(6)A methlytransferase TsaA Thiaville_Patrick_user 113 118 6 3 1 1 Show analysis Restart analysis Queued as job J_04962
Mycobacterial lipid and multidrug efflux system proteins MmpL, MmpS SvetaG 194 217 2 1 3 2 Show analysis Restart analysis Queued as job J_04964
Cytochrome bo ubiquinol oxidase SvetaG 135 136 25 13 22 6 Show analysis Restart analysis Queued as job J_04949
Heme O and Heme A biosynthesis SvetaG 152 194 25 9 21 3 Show analysis Restart analysis Queued as job J_04960
Mycobacterial lipid and multidrug efflux system proteins MmpL, MmpS SvetaG 217 217 2 1 3 2 Show analysis Restart analysis Queued as job J_04946
Bacterial Sphingolipids SvetaG 320 322 27 10 5 3 Show analysis Restart analysis Queued as job J_04947
5-oxoprolinase TEMP SvetaG 107 113 6 3 0 0 Show analysis Restart analysis Queued as job J_04938
Tripartite multidrug efflux systems (of RND type) in Pseudomonas SvetaG 263 263 14 18 0 0 Show analysis Restart analysis Queued as job J_04929
Heme O and Heme A biosynthesis (with selected terminal oxidases) SvetaG 121 154 40 48 29 15 Show analysis Restart analysis Queued as job J_04936
Heme and Siroheme Biosynthesis with hypotheticals SvetaG 742 752 118 77 93 26 Show analysis Restart analysis Queued as job J_04927
Outer membrane porins in Pseudomonas and Acinetobacter SvetaG 292 308 1 1 0 0 Show analysis Restart analysis Queued as job J_04956
Antibiotic targets in cell wall biosynthesis SvetaG 262 none Queued as job J_01936
COG0523 MTA cHaas 113 none Queued as job J_01937
DOE - COG0523 cHaas 141 none Queued as job J_01938
   

The following functionality is still experimental. It will install the selected subsystems, applying all assignments contained therein. 


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