The SEED: an Annotation/Analysis Tool Provided by FIG
[ Essentiality Data | FIG Tutorials | Peer-to-peer Updates | Subsystem Update Queue | SEED Control Panel | PATRIC | SEED Wiki]
[RAST | GOLD | "Complete" Genomes in SEED | ExPASy | IMG | KEGG | NCBI | TIGR cmr | UniProt ]

SEED version cvs.1555556707 (Wed Apr 17 22:05:07 2019) on gum.mcs.anl.gov
The SEED

FIG search
PEGs that Might Be in Clusters
Sim. Sc. Cluster Size PEG Genome Function Aliases
0.0 6 fig|209261.1.peg.1753 Salmonella enterica subsp. enterica serovar Typhi Ty2 Phage AB1 baseplate protein gp79 homolog GeneID:1068875, NP_805638.1, cmr|NT04ST1982, eric|ABS-0083584, gb|AAO69487.1, gi|213163359, gi|213426056, gi|213650106, gi|213852913, gi|214001738, gi|29137926, gi|29142296, gnl|md5|c09e6689a290ccf9cfb55e40, img|637405627, kegg|stt:t1870, ref|NP_805638.1, ref|ZP_03349069.1, ref|ZP_03358806.1, ref|ZP_03380159.1, ref|ZP_03382445.1, ref|ZP_03412473.1, t1870, tr|Q83T18
0.0 6 fig|220341.1.peg.1766 Salmonella enterica subsp. enterica serovar Typhi str. CT18 putative bacteriophage protein GeneID:1248359, NP_456376.1, STY2016, cmr|NT03ST2055, emb|CAD05559.1, eric|ABX-0109005, gi|16503056, gi|16760759, gi|25380437, gnl|md5|2d5366377cbf3e748a18307f, img|637217079, kegg|sty:STY2016, pir|, pir|AE0732, ref|NP_456376.1, tr|Q8Z645
0 5 fig|321314.4.peg.2948 Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67 putative bacteriophage protein GeneID:3335085, LocusTag:SC2585, YP_217572.1, cmr|NT06SE2960, eric|ADB-0003029, gb|AAX66491.1, gi|62128788, gi|62181155, gnl|md5|7bf11576f31e14b4f57ce282, img|637641479, kegg|sec:SC2585, ref|YP_217572.1, tr|Q57LC1
0 5 fig|321314.9.peg.3081 Salmonella enterica subsp. enterica serovar Choleraesuis str. putative bacteriophage protein cmr|NT06SE2960, eric|ADB-0003029, gb|AAX66491.1, geneID|3335085, gi|62128788, gi|62181155, gnl|md5|7bf11576f31e14b4f57ce282, img|637641479, kegg|sec:SC2585, locus|SC2585, protein_id|YP_217572.1, ref|YP_217572.1, tr|Q57LC1
0.0 5 fig|209261.6.peg.2050 Salmonella enterica subsp. enterica serovar Typhi str. Ty2 Phage AB1 baseplate protein gp79 homolog cmr|NT04ST1982, eric|ABS-0083584, gb|AAO69487.1, geneID|1068875, gi|213163359, gi|213426056, gi|213650106, gi|213852913, gi|214001738, gi|29137926, gi|29142296, gnl|md5|c09e6689a290ccf9cfb55e40, img|637405627, kegg|stt:t1870, locus|t1870, protein_id|NP_805638.1, ref|NP_805638.1, ref|ZP_03349069.1, ref|ZP_03358806.1, ref|ZP_03380159.1, ref|ZP_03382445.1, ref|ZP_03412473.1, tr|Q83T18
0.0 5 fig|496064.4.peg.3219 Salmonella enterica subsp. enterica serovar Typhi str. E98-3139 Phage AB1 baseplate protein gp79 homolog CDD:33108, cmr|NT04ST1982, eric|ABS-0083584, gb|AAO69487.1, gi|213163359, gi|213426056, gi|213650106, gi|213852913, gi|214001738, gi|29137926, gi|29142296, gnl|md5|c09e6689a290ccf9cfb55e40, img|637405627, kegg|stt:t1870, locus|Salmonellentericaenterica_010100015351, protein_id|ZP_03412473.1, ref|NP_805638.1, ref|ZP_03349069.1, ref|ZP_03358806.1, ref|ZP_03380159.1, ref|ZP_03382445.1, ref|ZP_03412473.1, tr|Q83T18
0.0 5 fig|497974.4.peg.2227 Salmonella enterica subsp. enterica serovar Typhi str. E02-1180 Phage AB1 baseplate protein gp79 homolog CDD:33108, cmr|NT04ST1982, eric|ABS-0083584, gb|AAO69487.1, gi|213163359, gi|213426056, gi|213650106, gi|213852913, gi|214001738, gi|29137926, gi|29142296, gnl|md5|c09e6689a290ccf9cfb55e40, img|637405627, kegg|stt:t1870, locus|SentesTyphi_010100010653, protein_id|ZP_03358806.1, ref|NP_805638.1, ref|ZP_03349069.1, ref|ZP_03358806.1, ref|ZP_03380159.1, ref|ZP_03382445.1, ref|ZP_03412473.1, tr|Q83T18
0.0 5 fig|1176487.3.peg.2575 Salmonella enterica subsp. enterica serovar Typhi str. ST0208 putative bacteriophage protein
0.0 5 fig|220341.7.peg.2035 Salmonella enterica subsp. enterica serovar Typhi str. CT18 putative bacteriophage protein cmr|NT03ST2055, emb|CAD05559.1, eric|ABX-0109005, geneID|1248359, gi|16503056, gi|16760759, gi|25380437, gnl|md5|2d5366377cbf3e748a18307f, img|637217079, kegg|sty:STY2016, locus|STY2016, pir|, pir|AE0732, protein_id|NP_456376.1, ref|NP_456376.1, tr|Q8Z645
9.1e-219 5 fig|423368.6.peg.1300 Salmonella enterica subsp. enterica serovar Newport str. SL254 putative bacteriophage protein gb|ACF62544.1, geneID|6484496, gi|194402322, gi|194443659, gnl|md5|890b428b82909a320c7b6dc5, img|642145799, img|642736578, kegg|see:SNSL254_A1176, locus|SNSL254_A1176, protein_id|YP_002040336.1, ref|YP_002040336.1, tr|B4T263
6.5e-197 5 fig|272994.5.peg.1849 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7 putative bacteriophage protein gb|ABX67596.1, geneID|5780705, gi|161363828, gi|161614464, gnl|md5|5cb1bc5251311222541944e3, img|641322645, kegg|spq:SPAB_02213, locus|SPAB_02213, protein_id|YP_001588429.1, ref|YP_001588429.1, tr|A9N4E1
1.5e-191 5 fig|585034.4.peg.2590 Escherichia coli IAI1 putative bacteriophage protein emb|CAQ99463.1, geneID|7127733, gi|218361863, gi|218555095, gnl|md5|d3d78d410076f6153b3c0897, kegg|ecr:ECIAI1_2625, locus|ECIAI1_2625, protein_id|YP_002388008.1, ref|YP_002388008.1, tr|B7M8C7
1.5e-190 5 fig|585395.4.peg.3237 Escherichia coli O103:H2 str. 12009 putative bacteriophage protein dbj|BAI31843.1, geneID|8474011, gi|257760346, gi|260845199, gnl|md5|00cf19e96d29feffdb47a75f, locus|ECO103_3092, protein_id|YP_003222977.1
2.1e-190 5 fig|679206.4.peg.4651 Escherichia coli MS 119-7 putative bacteriophage protein gi|300824928, locus|HMPREF9346_04791, protein_id|ZP_07105028.1
2.2e-190 5 fig|869689.3.peg.2052 Escherichia coli 3.3884 putative bacteriophage protein
4.4e-190 5 fig|701177.3.peg.3131 Escherichia coli O55:H7 str. CB9615 putative bacteriophage protein geneID|8872062, gi|291283794, gnl|md5|efeeff9ae1965c2c7a0ad99e, locus|G2583_3100, protein_id|YP_003500612.1
1.7e-189 5 fig|399742.10.peg.952 Enterobacter sp. 638 Phage AB1 baseplate protein gp79 homolog eric|AEL-0001007, gb|ABP59502.1, geneID|5111165, gi|145317355, gi|146310479, gnl|md5|adcd3892174dfc8a62d108ab, img|640490994, kegg|ent:Ent638_0817, locus|Ent638_0817, protein_id|YP_001175553.1, ref|YP_001175553.1, tr|A4W722
0.0 4 fig|1156917.3.peg.2538 Salmonella enterica subsp. enterica serovar Typhi str. BL196 Phage AB1 baseplate protein gp79 homolog
0.0 4 fig|1169660.3.peg.611 Salmonella enterica subsp. enterica serovar Typhi str. UJ308A Phage AB1 baseplate protein gp79 homolog
0.0 4 fig|1169661.3.peg.553 Salmonella enterica subsp. enterica serovar Typhi str. UJ816A Phage AB1 baseplate protein gp79 homolog
6.5e-197 4 fig|272994.6.peg.1802 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7 putative bacteriophage protein gb|ABX67596.1, geneID|5780705, gi|161363828, gi|161614464, gnl|md5|5cb1bc5251311222541944e3, img|641322645, kegg|spq:SPAB_02213, locus|SPAB_02213, protein_id|YP_001588429.1, ref|YP_001588429.1, tr|A9N4E1
9.6e-191 4 fig|656419.3.peg.3339 Escherichia coli M718 putative bacteriophage protein CDD:33108, gi|307222402, locus|EcolM_010100015748, protein_id|ZP_07508826.1
1.4e-189 4 fig|1004153.3.peg.1117 Escherichia coli AA86 putative bacteriophage protein
0.0 4 fig|550694.3.peg.568 Escherichia fergusonii B253 putative bacteriophage protein gi|324114549, locus|ERIG_00541, protein_id|EGC08517.1
0.0 4 fig|344610.7.peg.4159 Escherichia coli 53638 putative bacteriophage protein eric|ADP-0001521, gb|EDU64199.1, gi|188489096, gi|188493897, gnl|md5|ba2b9119012018db99ea3f5d, img|638692455, locus|Ec53638_3836, protein_id|ZP_03001167.1, ref|ZP_03001167.1, tr|B2N5V5
0.0 4 fig|766138.3.peg.1035 Shigella boydii 965-58 putative bacteriophage protein gi|391275053, locus|SB96558_0940, protein_id|EIQ33850.1
0.0 4 fig|766146.3.peg.1567 Shigella flexneri K-218 putative bacteriophage protein gi|333006235, locus|SFK218_1494, protein_id|EGK25744.1
4.5e-224 3 fig|476213.4.peg.1113 Salmonella enterica subsp. enterica serovar Paratyphi C strain putative bacteriophage protein geneID|7553560, gi|224582869, gnl|md5|fd198f1378321043da37849a, locus|SPC_1060, protein_id|YP_002636667.1
2.6e-221 3 fig|440534.5.peg.3442 Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701 putative bacteriophage protein gb|EDZ15072.1, gi|167993644, gi|205328308, gnl|md5|4ef3a051f0f65d0262247f77, img|641881946, locus|SeI_A0149, protein_id|ZP_02574738.1, ref|ZP_02574738.1, tr|B5N3T5
9.1e-219 3 fig|423368.8.peg.1289 Salmonella enterica subsp. enterica serovar Newport str. SL254 putative bacteriophage protein gb|ACF62544.1, geneID|6484496, gi|194402322, gi|194443659, gnl|md5|890b428b82909a320c7b6dc5, img|642145799, img|642736578, kegg|see:SNSL254_A1176, locus|SNSL254_A1176, protein_id|YP_002040336.1, ref|YP_002040336.1, tr|B4T263
9.1e-219 3 fig|796730.3.peg.1469 Salmonella enterica subsp. enterica serovar Newport str. CVM 22425 putative bacteriophage protein gi|392792853, locus|SEEN425_10299, protein_id|EJA49307.1
9.1e-219 3 fig|796731.3.peg.2884 Salmonella enterica subsp. enterica serovar Newport str. CVM 21538 putative bacteriophage protein gi|392789310, locus|SEEN538_07298, protein_id|EJA45830.1
9.1e-219 3 fig|796732.3.peg.3115 Salmonella enterica subsp. enterica serovar Newport str. CVM 22513 putative bacteriophage protein gi|392774004, locus|SEEN513_04472, protein_id|EJA30699.1
9.1e-219 3 fig|796733.3.peg.3522 Salmonella enterica subsp. enterica serovar Newport str. CVM 21550 putative bacteriophage protein gi|392775305, locus|SEEN550_02895, protein_id|EJA31997.1
9.1e-219 3 fig|858305.3.peg.1535 Salmonella enterica subsp. enterica serovar Newport str. CVM 22462 putative bacteriophage protein gi|392817218, locus|SEEN462_10692, protein_id|EJA73134.1
9.1e-219 3 fig|858307.3.peg.2419 Salmonella enterica subsp. enterica serovar Newport str. CVM N1543 putative bacteriophage protein gi|392802000, locus|SEEN543_14743, protein_id|EJA58220.1
1.5e-191 3 fig|585034.5.peg.2589 Escherichia coli IAI1 putative bacteriophage protein emb|CAQ99463.1, geneID|7127733, gi|218361863, gi|218555095, gnl|md5|d3d78d410076f6153b3c0897, kegg|ecr:ECIAI1_2625, locus|ECIAI1_2625, protein_id|YP_002388008.1, ref|YP_002388008.1, tr|B7M8C7
1.5e-190 3 fig|1078033.4.peg.1332 Escherichia coli O45:H2 str. 03-EN-705 putative bacteriophage protein
1.5e-190 3 fig|316401.4.peg.3105 Escherichia coli ETEC H10407 putative bacteriophage protein gi|309702902, locus|ETEC_2728, protein_id|CBJ02233.1
1.5e-190 3 fig|670894.3.peg.4437 Escherichia coli E128010 putative bacteriophage protein gi|323159168, locus|ECE128010_4511, protein_id|EFZ45158.1
1.5e-190 3 fig|868188.3.peg.3091 Escherichia coli DEC11C putative bacteriophage protein gi|378150913, locus|ECDEC11C_3188, protein_id|EHX12028.1
1.5e-190 3 fig|868189.3.peg.3241 Escherichia coli DEC11D putative bacteriophage protein gi|378148401, locus|ECDEC11D_2995, protein_id|EHX09541.1
1.5e-190 3 fig|868190.3.peg.2895 Escherichia coli DEC11E putative bacteriophage protein gi|378158058, locus|ECDEC11E_2975, protein_id|EHX19089.1
1.5e-190 3 fig|868191.3.peg.2095 Escherichia coli DEC12A putative bacteriophage protein gi|378170855, locus|ECDEC12A_2172, protein_id|EHX31730.1
1.5e-190 3 fig|868194.3.peg.30 Escherichia coli DEC12D putative bacteriophage protein gi|378192834, locus|ECDEC12D_5752, protein_id|EHX53386.1
2.2e-190 3 fig|869689.4.peg.2338 Escherichia coli 3.3884 putative bacteriophage protein gi|386229200, locus|EC33884_2101, protein_id|EII56555.1
1.7e-189 3 fig|399742.4.peg.859 Enterobacter sp. 638 Phage AB1 baseplate protein gp79 homolog Ent638_0817, GeneID:5111165, YP_001175553.1, eric|AEL-0001007, gb|ABP59502.1, gi|145317355, gi|146310479, gnl|md5|adcd3892174dfc8a62d108ab, img|640490994, kegg|ent:Ent638_0817, ref|YP_001175553.1, tr|A4W722

FIG search