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The SEED: an Annotation/Analysis Tool Provided by FIG
[ Essentiality Data | FIG Tutorials | Peer-to-peer Updates | Subsystem Update Queue | SEED Control Panel | PATRIC | SEED Wiki] [RAST | GOLD | "Complete" Genomes in SEED | ExPASy | IMG | KEGG | NCBI | TIGR cmr | UniProt ] SEED version cvs.1555556707 (Wed Apr 17 22:05:07 2019) on gum.mcs.anl.gov |
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| Sim. Sc. | Cluster Size | PEG | Genome | Function | Aliases |
|---|---|---|---|---|---|
| 1.1e-127 | 5 | fig|699035.5.peg.368 | Clostridium difficile M120 | Phage protein | |
| 2.3e-127 | 5 | fig|399726.7.peg.1285 | Thermoanaerobacter sp. X514 | Phage protein | gb|ABY92526.1, gb|EES34446.1, gb|EEU11201.1, geneID|5878119, gi|166854117, gi|167039877, gi|242232128, gi|242256298, gi|256383027, gi|256400541, gnl|md5|5c409436d13844af446495c1, img|639883961, img|641541582, kegg|tex:Teth514_1232, locus|Teth514_1232, protein_id|YP_001662862.1, ref|YP_001662862.1, ref|ZP_04801191.1, ref|ZP_05468093.1, tr|B0K6Q0, tr|C5RS32 |
| 2.3e-127 | 5 | fig|573062.3.peg.327 | Thermoanaerobacter sp. X513 | Phage protein | gb|ABY92526.1, gb|EES34446.1, gb|EEU11201.1, gi|166854117, gi|167039877, gi|242232128, gi|242256298, gi|256383027, gi|256400541, gnl|md5|5c409436d13844af446495c1, img|639883961, img|641541582, kegg|tex:Teth514_1232, locus|ThetDRAFT_0324, protein_id|ZP_04801191.1, ref|YP_001662862.1, ref|ZP_04801191.1, ref|ZP_05468093.1, tr|B0K6Q0, tr|C5RS32 |
| 2.3e-127 | 5 | fig|588857.3.peg.596 | Thermoanaerobacter sp. X561 | Phage protein | gb|ABY92526.1, gb|EES34446.1, gb|EEU11201.1, gi|166854117, gi|167039877, gi|242232128, gi|242256298, gi|256383027, gi|256400541, gnl|md5|5c409436d13844af446495c1, img|639883961, img|641541582, kegg|tex:Teth514_1232, locus|Teth561DRAFT_0592, protein_id|ZP_05468093.1, ref|YP_001662862.1, ref|ZP_04801191.1, ref|ZP_05468093.1, tr|B0K6Q0, tr|C5RS32 |
| 2.0e-120 | 5 | fig|573062.4.peg.1742 | Thermoanaerobacter sp. X513 | Phage protein | geneID|9761460, gi|307724799, locus|Thet_1677, protein_id|YP_003904550.1 |
| 3.0e-111 | 5 | fig|267747.3.peg.1647 | Propionibacterium acnes KPA171202 | Phage protein | cmr|NT02PA1699, gb|AAT83341.1, geneID|2933154, gi|50840674, gi|50843072, gnl|md5|58b22a5dc288177b7eaee479, img|637522353, kegg|pac:PPA1604, locus|PPA1604, protein_id|YP_056299.1, ref|YP_056299.1, tr|Q6A7C4 |
| 4.8e-210 | 4 | fig|682147.3.peg.128 | Gardnerella vaginalis AMD | Phage protein | gi|297242720, gnl|md5|c689902f66f7ba51366d89fc, locus|GVAMD_0732, protein_id|ZP_06926658.1 |
| 4.0e-140 | 4 | fig|431943.8.peg.2768 | Clostridium kluyveri DSM 555 | Phage protein | dbj|BAH07412.1, gb|EDK34675.1, geneID|5393037, gi|146348139, gi|153955281, gi|219569428, gi|219855704, gnl|md5|3a2e65350b8b7e338898f94e, img|640859902, kegg|ckl:CKL_2663, kegg|ckr:CKR_2361, locus|CKL_2663, protein_id|YP_001396046.1, ref|YP_001396046.1, ref|YP_002472826.1, tr|A5N0M9, tr|B9E4I7 |
| 4.0e-140 | 4 | fig|583346.6.peg.2662 | Clostridium kluyveri NBRC 12016 | Phage protein | dbj|BAH07412.1, gb|EDK34675.1, geneID|7273508, gi|146348139, gi|153955281, gi|219569428, gi|219855704, gnl|md5|3a2e65350b8b7e338898f94e, img|640859902, kegg|ckl:CKL_2663, kegg|ckr:CKR_2361, locus|CKR_2361, protein_id|YP_002472826.1, ref|YP_001396046.1, ref|YP_002472826.1, tr|A5N0M9, tr|B9E4I7 |
| 8.7e-133 | 4 | fig|1538.8.peg.314 | Clostridium ljungdahlii | Phage protein | geneID|9443954, gi|300853537, locus|CLJU_c03370, protein_id|YP_003778521.1 |
| 1.5e-124 | 4 | fig|742740.3.peg.1140 | Clostridium symbiosum WAL-14163 | Phage protein | |
| 3.6e-112 | 4 | fig|565642.4.peg.402 | Enterococcus faecalis ATCC 4200 | Phage protein | gb|EEU15777.1, gb|EEU83695.1, gi|256596601, gi|256617074, gi|256996393, gi|257088363, gnl|md5|000cbdc85a6387d9f4e6503f, ref|ZP_05473920.1, ref|ZP_05582724.1 |
| 3.6e-112 | 4 | fig|565650.5.peg.2631 | Enterococcus faecalis D6 | Phage protein | gb|EEU15777.1, gb|EEU83695.1, gi|256596601, gi|256617074, gi|256996393, gi|257088363, gnl|md5|000cbdc85a6387d9f4e6503f, ref|ZP_05473920.1, ref|ZP_05582724.1 |
| 2.0e-107 | 4 | fig|243164.3.peg.962 | Dehalococcoides ethenogenes 195 | Phage protein | GeneID:3229596, LocusTag:DET1102, YP_181817.1, cmr|DET_1102, gb|AAW39635.1, gi|57224578, gi|57234130, gnl|md5|87519635bb495fd1d69e1b3b, img|637120666, kegg|det:DET1102, ref|YP_181817.1, tr|Q3Z7I2 |
| 1.7e-106 | 4 | fig|498761.3.peg.2603 | Heliobacterium modesticaldum Ice1 | Phage protein | geneID|5911632, gi|167630955, gnl|md5|c9bcfdd7b82737170452453c, locus|HM1_2934, protein_id|YP_001681454.1 |
| 1.7e-106 | 4 | fig|498761.4.peg.2610 | Heliobacterium modesticaldum Ice1 | Phage protein | geneID|5911632, gi|167630955, gnl|md5|c9bcfdd7b82737170452453c, locus|HM1_2934, protein_id|YP_001681454.1 |
| 2.2e-106 | 4 | fig|585199.3.peg.412 | Mobiluncus mulieris ATCC 35243 | Phage protein | gb|EEJ54511.1, gi|227844347, gi|227875069, gnl|md5|31ffd2d42823a8e72f0cd32f, ref|ZP_03993214.1, tr|C2KNZ6 |
| 2.2e-106 | 4 | fig|871571.3.peg.1639 | Mobiluncus mulieris ATCC 35239 | Phage protein | |
| 4.0e-140 | 3 | fig|431943.4.peg.2712 | Clostridium kluyveri DSM 555 | Phage protein | CKL_2663, GeneID:5393037, YP_001396046.1, dbj|BAH07412.1, gb|EDK34675.1, gi|146348139, gi|153955281, gi|219569428, gi|219855704, gnl|md5|3a2e65350b8b7e338898f94e, img|640859902, kegg|ckl:CKL_2663, kegg|ckr:CKR_2361, ref|YP_001396046.1, ref|YP_002472826.1, tr|A5N0M9, tr|B9E4I7 |
| 2.6e-139 | 3 | fig|394503.6.peg.2934 | Clostridium cellulolyticum H10 | Phage protein | gb|ACL77153.1, geneID|7312416, gi|220000552, gi|220930224, gnl|md5|9e710f4a4929f78caf8a089b, kegg|cce:Ccel_2859, locus|Ccel_2859, protein_id|YP_002507133.1, ref|YP_002507133.1, tr|B8I853 |
| 2.6e-139 | 3 | fig|394503.7.peg.2942 | Clostridium cellulolyticum H10 | Phage protein | gb|ACL77153.1, geneID|7312416, gi|220000552, gi|220930224, gnl|md5|9e710f4a4929f78caf8a089b, kegg|cce:Ccel_2859, locus|Ccel_2859, protein_id|YP_002507133.1, ref|YP_002507133.1, tr|B8I853 |
| 6.4e-138 | 3 | fig|293826.4.peg.3845 | Alkaliphilus metalliredigens QYMF | Phage protein | ABR50094.1, Amet_4012, gb|ABR50094.1, gi|149951566, gi|150391704, gnl|md5|bed50ebffdcbeec724f571df, img|638737656, img|640784808, kegg|amt:Amet_4012, ref|YP_001321753.1, tr|A6TV76 |
| 1.3e-130 | 3 | fig|293826.6.peg.4133 | Alkaliphilus metalliredigens QYMF | Phage protein | geneID|5314093, gi|150391704, gnl|md5|c2dcad45db7f4301b21d72fe, locus|Amet_4012, protein_id|YP_001321753.1 |
| 2.3e-127 | 3 | fig|399726.4.peg.1202 | Thermoanaerobacter sp. X514 | Phage protein | ABY92526.1, Teth514_1232, gb|ABY92526.1, gb|EES34446.1, gb|EEU11201.1, gi|166854117, gi|167039877, gi|242232128, gi|242256298, gi|256383027, gi|256400541, gnl|md5|5c409436d13844af446495c1, img|639883961, img|641541582, kegg|tex:Teth514_1232, ref|YP_001662862.1, ref|ZP_04801191.1, ref|ZP_05468093.1, tr|B0K6Q0, tr|C5RS32 |
| 2.4e-124 | 3 | fig|222523.1.peg.375 | Bacillus cereus ATCC 10987 | Phage protein | BCE0375, GeneID:2751608, NP_976703.1, cmr|BCE_0375, gb|AAS39311.1, gi|42735372, gi|42779456, gnl|md5|e5c12b2f4ec79a6db93883bf, img|637277164, kegg|bca:BCE_0375, pathema|gbc.1755.cds.ORFB00112, ref|NP_976703.1, tr|Q73EI3 |
| 2.4e-124 | 3 | fig|222523.6.peg.359 | Bacillus cereus ATCC 10987 | Phage protein | cmr|BCE_0375, gb|AAS39311.1, geneID|2751608, gi|42735372, gi|42779456, gnl|md5|e5c12b2f4ec79a6db93883bf, img|637277164, kegg|bca:BCE_0375, locus|BCE_0375, pathema|gbc.1755.cds.ORFB00112, protein_id|NP_976703.1, ref|NP_976703.1, tr|Q73EI3 |
| 1.6e-123 | 3 | fig|879310.3.peg.1066 | Selenomonas sp. oral taxon 137 str. F0430 | Phage protein | gi|313895680, locus|HMPREF9162_1727, protein_id|ZP_07829236.1 |
| 2.3e-114 | 3 | fig|657310.3.peg.1593 | Enterococcus sp. 7L76 | Phage protein | |
| 3.8e-114 | 3 | fig|393121.3.peg.1841 | Listeria monocytogenes FSL J2-071 | Phage protein | gi|254878874, gnl|md5|edbba25991ae12a1cf29406f, img|640964667, ref|ZP_05251584.1 |
| 1.2e-113 | 3 | fig|887326.3.peg.1348 | Mobiluncus curtisii ATCC 51333 | Phage protein | |
| 4.7e-112 | 3 | fig|717961.3.peg.577 | Eubacterium siraeum V10Sc8a | Phage protein | |
| 2.3e-111 | 3 | fig|525262.3.peg.1136 | Corynebacterium jeikeium ATCC 43734 | Phage protein | gb|EEW16083.1, gi|258602805, gnl|md5|321dd62961a680872fe4865c |
| 2.3e-111 | 3 | fig|662755.4.peg.1071 | Corynebacterium resistens DSM 45100 | Phage protein | CDD:151373, gi|300933487, locus|CresD4_010100005412, protein_id|ZP_07148743.1 |
| 2.3e-111 | 3 | fig|596328.3.peg.655 | Mobiluncus mulieris 28-1 | Phage protein | gi|269976592, gnl|md5|232c71f2de722d5dfc07273e, locus|HMPREF0578_1187, protein_id|ZP_06183577.1 |
| 1.7e-109 | 3 | fig|887899.3.peg.1059 | Mobiluncus curtisii subsp. holmesii ATCC 35242 | Phage protein | |
| 2.2e-109 | 3 | fig|663278.3.peg.2669 | Ethanoligenens harbinense YUAN-3 | Phage protein | gi|289640249, gnl|md5|a868bc56d84b2f3b2803a7da, locus|EthhaDRAFT_2544, protein_id|ZP_06472466.1 |
| 2.2e-109 | 3 | fig|663278.4.peg.1981 | Ethanoligenens harbinense YUAN-3 | Phage protein | geneID|10092792, gi|317132756, locus|Ethha_1814, protein_id|YP_004092070.1 |
| 2.8e-109 | 3 | fig|563191.3.peg.67 | Acidaminococcus sp. D21 | Phage protein | gb|EEH89714.1, gi|226903796, gi|227498334, gnl|md5|84191de9e27be66c15b191f4, locus|ACDG_00073, protein_id|ZP_03928484.1, ref|ZP_03928484.1, tr|C0W9D2 |
| 2.8e-109 | 3 | fig|568816.4.peg.1939 | Acidaminococcus intestini RyC-MR95 | Phage protein | gi|350280016, locus|Acin_2000, protein_id|AEQ23206.1 |
| 5.3e-108 | 3 | fig|575594.3.peg.899 | Lactobacillus coleohominis 101-4-CHN | Phage protein | gb|EEU30499.1, gi|256715523, gi|256847834, gnl|md5|a185e7d478bd85d4abcec415, ref|ZP_05553279.1 |
| 1.2e-107 | 3 | fig|573061.3.peg.100 | Clostridium cellulovorans 743B | Phage protein | gb|EES32139.1, gi|242228909, gi|242258800, gnl|md5|5c3496a7b9d6a3aadd8bb490, locus|ClocelDRAFT_0101, protein_id|ZP_04803532.1, ref|ZP_04803532.1, tr|C5RDK8 |
| 1.2e-107 | 3 | fig|573061.4.peg.953 | Clostridium cellulovorans 743B | Phage protein | CDD:151373, gi|307687475, locus|Ccel74_010100004918, protein_id|ZP_07629921.1 |
| 1.2e-107 | 3 | fig|573061.5.peg.4118 | Clostridium cellulovorans 743B | Phage protein | InterPro:IPR021229, geneID|9610912, gi|302876793, locus|Clocel_3999, protein_id|YP_003845426.1 |
| 1.2e-107 | 3 | fig|591001.3.peg.1128 | Acidaminococcus fermentans DSM 20731 | Phage protein | geneID|8737618, gi|284048477, gnl|md5|6716f446c7c378b457cd76af, locus|Acfer_1134, protein_id|YP_003398816.1 |
| 7.7e-107 | 3 | fig|411468.9.peg.3218 | Clostridium scindens ATCC 35704 | Phage protein | gb|EDS05376.1, gi|167661246, gi|167761127, gnl|md5|5aeb112a87d4e490e18c9c88, img|642195762, locus|CLOSCI_03525, protein_id|ZP_02433254.1, ref|ZP_02433254.1, tr|B0NJ46 |
| 1.7e-152 | 2 | fig|596315.3.peg.1211 | Peptostreptococcus stomatis DSM 17678 | Phage protein | gi|307244285, locus|HMPREF0634_0591, protein_id|ZP_07526400.1 |
| 3.0e-111 | 2 | fig|267747.1.peg.1576 | Propionibacterium acnes KPA171202 | Phage protein | GeneID:2933154, PPA1604, YP_056299.1, cmr|NT02PA1699, gb|AAT83341.1, gi|50840674, gi|50843072, gnl|md5|58b22a5dc288177b7eaee479, img|637522353, kegg|pac:PPA1604, ref|YP_056299.1, tr|Q6A7C4 |
| 1.7e-106 | 2 | fig|491077.3.peg.545 | Lactobacillus reuteri SD2112 | Phage protein | gb|EEI65808.1, gb|EEJ91983.1, gi|227185737, gi|227544277, gi|227956504, gi|227975606, gnl|md5|fbbc632555350e78a6e97c74, ref|ZP_03974326.1, ref|ZP_04023866.1, tr|C2F0Y9, tr|C2GNV3 |
| 1.7e-106 | 2 | fig|525341.3.peg.1333 | Lactobacillus reuteri CF48-3A | Phage protein | gb|EEI65808.1, gb|EEJ91983.1, gi|227185737, gi|227544277, gi|227956504, gi|227975606, gnl|md5|fbbc632555350e78a6e97c74, ref|ZP_03974326.1, ref|ZP_04023866.1, tr|C2F0Y9, tr|C2GNV3 |