The SEED: an Annotation/Analysis Tool Provided by FIG
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SEED version cvs.1555556707 (Wed Apr 17 22:05:07 2019) on gum.mcs.anl.gov
The SEED

FIG search
PEGs that Might Be in Clusters
Sim. Sc. Cluster Size PEG Genome Function Aliases
7.1e-103 8 fig|879299.3.peg.825 Lactobacillus iners LactinV 09V1-c Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) gene_name|mutM, gi|309805278, locus|HMPREF9213_1403, protein_id|ZP_07699330.1
0 7 fig|324831.13.peg.1409 Lactobacillus gasseri ATCC 33323 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) GO:0003684, GO:0006284, GO:0006289, GO:0008270, GO:0008534, gb|ABJ60781.1, gb|EEQ25845.1, geneID|4439366, gi|116095629, gi|116630047, gi|122273016, gi|226819636, gi|238833574, gi|238853765, gnl|md5|adff4091942881f1e2bc8038, img|639673252, kegg|lga:LGAS_1420, locus|LGAS_1420, protein_id|YP_815219.1, ref|YP_815219.1, ref|ZP_03808755.1, ref|ZP_04644131.1, sp|FPG_LACGA, sp|Q041U1, tr|C4VT54
0 7 fig|559301.5.peg.613 Lactobacillus gasseri MV-22 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) GO:0003684, GO:0006284, GO:0006289, GO:0008270, GO:0008534, gb|ABJ60781.1, gb|EEQ25845.1, gi|116095629, gi|116630047, gi|122273016, gi|226819636, gi|238833574, gi|238853765, gnl|md5|adff4091942881f1e2bc8038, img|639673252, kegg|lga:LGAS_1420, ref|YP_815219.1, ref|ZP_03808755.1, ref|ZP_04644131.1, sp|FPG_LACGA, sp|Q041U1, tr|C4VT54
0 7 fig|575603.3.peg.840 Lactobacillus gasseri SJ-9E-US Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23)
0 7 fig|630527.3.peg.1219 Lactobacillus gasseri 202-4 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) GO:0003684, GO:0006284, GO:0006289, GO:0008270, GO:0008534, gb|ABJ60781.1, gb|EEQ25845.1, gene_name|mutM, gi|116095629, gi|116630047, gi|122273016, gi|226819636, gi|238833574, gi|238853765, gnl|md5|adff4091942881f1e2bc8038, img|639673252, kegg|lga:LGAS_1420, locus|HMPREF0890_1772, protein_id|ZP_04644131.1, ref|YP_815219.1, ref|ZP_03808755.1, ref|ZP_04644131.1, sp|FPG_LACGA, sp|Q041U1, tr|C4VT54
4e-146 7 fig|257314.1.peg.1443 Lactobacillus johnsonii NCC 533 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) GO:0003684, GO:0006284, GO:0006289, GO:0008270, GO:0008534, GeneID:2742963, LJ1650, NP_965457.1, cmr|NT01LJ1469, gb|AAS09423.1, gi|41583816, gi|42519527, gi|81703799, gnl|md5|7a9144dc8fa4c7c326d3ea21, img|637480263, kegg|ljo:LJ1650, ref|NP_965457.1, sp|FPG_LACJO, sp|Q74IB5
4e-146 7 fig|257314.6.peg.1476 Lactobacillus johnsonii NCC 533 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) GO:0003684, GO:0006284, GO:0006289, GO:0008270, GO:0008534, cmr|NT01LJ1469, gb|AAS09423.1, geneID|2742963, gi|41583816, gi|42519527, gi|81703799, gnl|md5|7a9144dc8fa4c7c326d3ea21, img|637480263, kegg|ljo:LJ1650, locus|LJ1650, protein_id|NP_965457.1, ref|NP_965457.1, sp|FPG_LACJO, sp|Q74IB5
9.6e-120 7 fig|575595.3.peg.837 Lactobacillus crispatus 125-2-CHN Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) gb|EEU20270.1, gi|256615069, gi|256843649, gnl|md5|1ac5e8714a3ab2e9ac1f9dc6, ref|ZP_05549137.1
9.6e-120 7 fig|679188.3.peg.1630 Lactobacillus crispatus 214-1 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) gb|EEU20270.1, gene_name|mutM, gi|256615069, gi|256843649, gi|293381756, gnl|md5|1ac5e8714a3ab2e9ac1f9dc6, locus|HMPREF0891_0813, protein_id|ZP_06627733.1, ref|ZP_05549137.1
4e-117 7 fig|272621.13.peg.1471 Lactobacillus acidophilus NCFM Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) (EC 4.2.99.18) GO:0003684, GO:0006284, GO:0006289, GO:0008270, GO:0008534, cmr|NT01LA1542, gb|AAV43366.1, gb|EEJ75257.1, geneID|3251489, gene_name|mutM, gi|227867836, gi|227904461, gi|58255129, gi|58337812, gi|75507557, gnl|md5|1da7e39c7357da2e6dd52084, img|637626771, kegg|lac:LBA1549, locus|LBA1549, protein_id|YP_194397.1, ref|YP_194397.1, ref|ZP_04022266.1, sp|FPG_LACAC, sp|Q5FIV8, tr|C2HQX1
4e-117 7 fig|272621.3.peg.1542 Lactobacillus acidophilus NCFM Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) (EC 4.2.99.18) GENE:mutM, GO:0003684, GO:0006284, GO:0006289, GO:0008270, GO:0008534, GeneID:3251489, LocusTag:LBA1549, YP_194397.1, cmr|NT01LA1542, gb|AAV43366.1, gb|EEJ75257.1, gi|227867836, gi|227904461, gi|58255129, gi|58337812, gi|75507557, gnl|md5|1da7e39c7357da2e6dd52084, img|637626771, kegg|lac:LBA1549, mutM, ref|YP_194397.1, ref|ZP_04022266.1, sp|FPG_LACAC, sp|Q5FIV8, tr|C2HQX1
4e-117 7 fig|525306.3.peg.76 Lactobacillus acidophilus ATCC 4796 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) (EC 4.2.99.18) GO:0003684, GO:0006284, GO:0006289, GO:0008270, GO:0008534, cmr|NT01LA1542, gb|AAV43366.1, gb|EEJ75257.1, gi|227867836, gi|227904461, gi|58255129, gi|58337812, gi|75507557, gnl|md5|1da7e39c7357da2e6dd52084, img|637626771, kegg|lac:LBA1549, ref|YP_194397.1, ref|ZP_04022266.1, sp|FPG_LACAC, sp|Q5FIV8, tr|C2HQX1
6.3e-103 7 fig|879297.3.peg.659 Lactobacillus iners LactinV 01V1-a Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) (EC 4.2.99.18) gene_name|mutM, gi|309808040, locus|HMPREF9211_1443, protein_id|ZP_07701959.1
6.3e-103 7 fig|879301.3.peg.1167 Lactobacillus iners LEAF 2053A-b Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) (EC 4.2.99.18) gene_name|mutM, gi|311088886, locus|HMPREF9216_0169, protein_id|EFQ47329.1
6.3e-103 7 fig|928328.3.peg.210 Lactobacillus iners UPII 60-B Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) (EC 4.2.99.18) gene_name|mutM, gi|325912596, locus|HMPREF0523_0797, protein_id|ZP_08174979.1
7.1e-103 7 fig|879296.3.peg.1258 Lactobacillus iners SPIN 2503V10-D Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) gene_name|mutM, gi|309810236, locus|HMPREF9215_1319, protein_id|ZP_07704081.1
1.3e-88 7 fig|321956.7.peg.1380 Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) GO:0003684, GO:0006284, GO:0006289, GO:0008270, GO:0008534, cmr|NT02LD1442, gb|ABJ58919.1, geneID|4435182, gi|116093766, gi|116514451, gi|122274817, gnl|md5|492e3c6d16692c3b96738a09, img|639671287, kegg|lbu:LBUL_1406, locus|LBUL_1406, protein_id|YP_813357.1, ref|YP_813357.1, sp|FPG_LACDB, sp|Q049F3
2e-79 7 fig|1029822.3.peg.893 Lactobacillus salivarius NIAS840 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) gi|334308191, locus|NIAS840_00895, protein_id|EGL99177.1
2e-79 7 fig|1041521.3.peg.1456 Lactobacillus salivarius GJ-24 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) gi|335349400, locus|LSGJ_01448, protein_id|EGM50900.1
1e-78 7 fig|930942.3.peg.1097 Lactobacillus animalis KCTC 3501 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23)
0 6 fig|324831.10.peg.1343 Lactobacillus gasseri ATCC 33323 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) GO:0003684, GO:0006284, GO:0006289, GO:0008270, GO:0008534, GeneID:4439366, LGAS_1420, YP_815219.1, gb|ABJ60781.1, gb|EEQ25845.1, gi|116095629, gi|116630047, gi|122273016, gi|226819636, gi|238833574, gi|238853765, gnl|md5|adff4091942881f1e2bc8038, img|639673252, kegg|lga:LGAS_1420, ref|YP_815219.1, ref|ZP_03808755.1, ref|ZP_04644131.1, sp|FPG_LACGA, sp|Q041U1, tr|C4VT54
2.3e-145 6 fig|633699.4.peg.1374 Lactobacillus johnsonii FI9785 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) geneID|8570813, gene_name|mutM, gi|268319915, gnl|md5|6ffd2edd57492daaefe86159, locus|FI9785_1445, protein_id|YP_003293571.1
1e-144 6 fig|1037411.3.peg.1104 Lactobacillus johnsonii pf01 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) gi|338761555, locus|PF01_01115, protein_id|EGP12824.1
1e-144 6 fig|909954.3.peg.1458 Lactobacillus johnsonii DPC 6026 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) gi|329667766, locus|LJP_1392c, protein_id|AEB93714.1
6.8e-122 6 fig|695560.3.peg.1700 Lactobacillus amylovorus GRL 1112 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23)
6e-120 6 fig|695562.4.peg.1550 Lactobacillus amylovorus GRL1118 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) gi|327184033, locus|LAB52_07805, protein_id|AEA32480.1
4.8e-120 6 fig|440496.3.peg.2050 Lactobacillus crispatus CTV-05 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23)
4.8e-120 6 fig|575598.3.peg.336 Lactobacillus crispatus SJ-3C-US Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23)
1.9e-119 6 fig|891391.3.peg.1647 Lactobacillus acidophilus 30SC Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) geneID|10275954, gi|325957303, locus|LAC30SC_08375, protein_id|YP_004292715.1
8.5e-119 6 fig|748671.3.peg.1504 Lactobacillus crispatus ST1 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) gnl|md5|830494534190bfcb9c7ab461
1e-116 6 fig|1033837.3.peg.451 Lactobacillus kefiranofaciens ZW3 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) geneID|10749724, gi|336053751, locus|WANG_0241, protein_id|YP_004562038.1
7.5e-115 6 fig|585524.3.peg.443 Lactobacillus amylolyticus DSM 11664 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) gene_name|mutM, gi|295425308, gnl|md5|e75c2bcf4c827aad5739f387, locus|HMPREF0493_0452, protein_id|ZP_06818011.1
7.2e-111 6 fig|767462.3.peg.613 Lactobacillus helveticus H10 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) gi|323466098, locus|LBHH_0561, protein_id|ADX69785.1
1.9e-103 6 fig|928327.3.peg.889 Lactobacillus iners UPII 143-D Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) gene_name|mutM, gi|325912043, locus|HMPREF0522_0892, protein_id|ZP_08174441.1
3.2e-103 6 fig|879303.3.peg.1005 Lactobacillus iners LEAF 2062A-h1 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) gene_name|mutM, gi|311091438, locus|HMPREF9218_0496, protein_id|EFQ49822.1
6.3e-103 6 fig|525328.4.peg.982 Lactobacillus iners DSM 13335 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) (EC 4.2.99.18) gb|EEW52393.1, gene_name|fpg, gi|259167898, gi|259500514, gnl|md5|bc1037cb2cf106dfa0afdb4f, locus|HMPREF0520_0024, protein_id|ZP_05743416.1, ref|ZP_05743416.1
6.3e-103 6 fig|665945.3.peg.207 Lactobacillus sp. 7_1_47FAA Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) (EC 4.2.99.18) gi|348608637, locus|HMPREF1027_00206, protein_id|EGY58617.1
6.3e-103 6 fig|713605.5.peg.826 Lactobacillus iners AB-1 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) (EC 4.2.99.18) CDD:167156, gi|302191204, locus|LineA_010100004272, protein_id|ZP_07267458.1
7.1e-103 6 fig|879300.3.peg.125 Lactobacillus iners LactinV 11V1-d Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) gene_name|mutM, gi|309803096, locus|HMPREF9214_0495, protein_id|ZP_07697193.1
7.1e-103 6 fig|879302.3.peg.1031 Lactobacillus iners LEAF 2052A-d Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) gene_name|mutM, gi|311090290, locus|HMPREF9217_0241, protein_id|EFQ48700.1
7.1e-103 6 fig|879295.3.peg.423 Lactobacillus iners SPIN 1401G Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) gene_name|mutM, gi|329920100, locus|HMPREF9210_0467, protein_id|ZP_08276931.1
7.1e-103 6 fig|879304.3.peg.1036 Lactobacillus iners LEAF 3008A-a Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) gene_name|mutM, gi|311092753, locus|HMPREF9219_0218, protein_id|EFQ51109.1
9.2e-103 6 fig|888801.3.peg.1011 Lactobacillus iners ATCC 55195 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23)
9.7e-089 6 fig|767455.3.peg.1456 Lactobacillus delbrueckii subsp. bulgaricus ND02 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) gene_name|fpg, gi|312280754, locus|LDBND_1444, protein_id|ADQ61473.1
7e-88 6 fig|888027.3.peg.452 Lactobacillus delbrueckii subsp. lactis DSM 20072 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) gene_name|fpg, gi|325685807, locus|HMPREF5505_0483, protein_id|EGD27880.1
1.3e-88 6 fig|321956.5.peg.1223 Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) ABJ58919.1, GO:0003684, GO:0006284, GO:0006289, GO:0008270, GO:0008534, LBUL_1406, cmr|NT02LD1442, gb|ABJ58919.1, gi|116093766, gi|116514451, gi|122274817, gnl|md5|492e3c6d16692c3b96738a09, img|639671287, kegg|lbu:LBUL_1406, ref|YP_813357.1, sp|FPG_LACDB, sp|Q049F3
1.4e-087 6 fig|353496.3.peg.1418 Lactobacillus delbrueckii subsp. bulgaricus 2038 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) gi|325126151, locus|LBU_1296, protein_id|ADY85481.1
2.7e-078 6 fig|908339.3.peg.176 Lactobacillus oris PB013-T2-3 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) gene_name|mutM, gi|311095752, locus|HMPREF9265_1905, protein_id|EFQ54004.1
0 3 fig|679196.3.peg.592 Lactobacillus gasseri 224-1 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) GO:0003684, GO:0006284, GO:0006289, GO:0008270, GO:0008534, gb|ABJ60781.1, gb|EEQ25845.1, gene_name|mutM, gi|116095629, gi|116630047, gi|122273016, gi|226819636, gi|238833574, gi|238853765, gi|282851274, gnl|md5|adff4091942881f1e2bc8038, img|639673252, kegg|lga:LGAS_1420, locus|HMPREF9209_0308, protein_id|ZP_06260639.1, ref|YP_815219.1, ref|ZP_03808755.1, ref|ZP_04644131.1, sp|FPG_LACGA, sp|Q041U1, tr|C4VT54
9.7e-089 2 fig|784613.4.peg.759 Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) gene_name|mutM, gi|300811969, locus|HMPREF9264_1892, protein_id|ZP_07092427.1

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