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The SEED: an Annotation/Analysis Tool Provided by FIG
[ Essentiality Data | FIG Tutorials | Peer-to-peer Updates | Subsystem Update Queue | SEED Control Panel | PATRIC | SEED Wiki] [RAST | GOLD | "Complete" Genomes in SEED | ExPASy | IMG | KEGG | NCBI | TIGR cmr | UniProt ] SEED version cvs.1555556707 (Wed Apr 17 22:05:07 2019) on aspen.cels.anl.gov |
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| Sim. Sc. | Cluster Size | PEG | Genome | Function | Aliases |
|---|---|---|---|---|---|
| 1.2e-066 | 5 | fig|688245.4.peg.3785 | Comamonas testosteroni CNB-2 | Prophage Clp protease-like protein | geneID|8562211, gi|264679702, locus|CtCNB1_3567, protein_id|YP_003279609.1 |
| 3.7e-048 | 5 | fig|744980.3.peg.2407 | Roseibium sp. TrichSKD4 | Phage head, head-tail preconnector protease C / Phage head, scaffolding domain Nu3 | gi|307943881, locus|TRICHSKD4_2531, protein_id|ZP_07659224.1 |
| 8.6e-097 | 4 | fig|864563.3.peg.284 | Selenomonas sp. oral taxon 149 str. 67H29BP | Prophage Clp protease-like protein | |
| 1.4e-059 | 4 | fig|501479.3.peg.4307 | Citreicella sp. SE45 | Phage head, head-tail preconnector protease C / Phage head, scaffolding domain Nu3 | |
| 6.8e-059 | 4 | fig|288000.5.peg.6423 | Bradyrhizobium sp. BTAi1 | Phage head, head-tail preconnector protease C / Phage head, scaffolding domain Nu3 | BBta_6597, GeneID:5155901, YP_001242406.1, gi|148257821 |
| 6.8e-059 | 4 | fig|288000.8.peg.6592 | Bradyrhizobium sp. BTAi1 | Phage head, head-tail preconnector protease C / Phage head, scaffolding domain Nu3 | geneID|5155901, gi|148257821, locus|BBta_6597, protein_id|YP_001242406.1 |
| 1.3e-046 | 4 | fig|439375.7.peg.1576 | Ochrobactrum anthropi ATCC 49188 | Phage head, head-tail preconnector protease C / Phage head, scaffolding domain Nu3 | InterPro:IPR006433, geneID|5379139, gi|153008835, locus|Oant_1504, protein_id|YP_001370050.1 |
| 1.7e-041 | 4 | fig|323098.6.peg.889 | Nitrobacter winogradskyi Nb-255 | ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) | InterPro:IPR001901, InterPro:IPR006433, geneID|3676028, gi|75675003, locus|Nwi_0807, protein_id|YP_317424.1 |
| 1.4e-133 | 3 | fig|469381.4.peg.509 | Dethiosulfovibrio peptidovorans DSM 11002 | Phage head, head-tail preconnector protease C / Phage head, scaffolding domain Nu3 | |
| 1.4e-133 | 3 | fig|469381.5.peg.8 | Dethiosulfovibrio peptidovorans DSM 11002 | Phage head, head-tail preconnector protease C / Phage head, scaffolding domain Nu3 | gi|229212842, locus|DpepDRAFT_00080, protein_id|ZP_04339192.1 |
| 1e-115 | 3 | fig|756067.3.peg.3846 | Microcoleus vaginatus FGP-2 | hypothetical protein | InterPro:IPR019734, gi|334119542, locus|MicvaDRAFT_0840, protein_id|ZP_08493627.1 |
| 4.5e-088 | 3 | fig|577650.3.peg.208 | Desulfobulbus propionicus DSM 2032 | Phage head, head-tail preconnector protease C / Phage head, scaffolding domain Nu3 # fragment | geneID|10172898, gi|320352338, locus|Despr_0197, protein_id|YP_004193677.1 |
| 6.1e-060 | 3 | fig|414684.5.peg.53 | Rhodospirillum centenum SW | ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) | geneID|7004846, gi|209963416, locus|RC1_0069, protein_id|YP_002296331.1 |
| 1.9e-053 | 3 | fig|675806.3.peg.3836 | Vibrio mimicus MB-451 | Prophage Clp protease-like protein | gi|262174040, locus|VII_003751, protein_id|ZP_06041716.1 |
| 1.5e-048 | 3 | fig|866778.4.peg.903 | Veillonella atypica ACS-134-V-Col7a | Phage protein | gi|303229277, locus|HMPREF9684_0022, protein_id|ZP_07316072.1 |
| 1.7e-041 | 3 | fig|323098.3.peg.901 | Nitrobacter winogradskyi Nb-255 | ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) | GeneID:3676028, LocusTag:Nwi_0807, YP_317424.1, gi|75675003 |
| 1.7e-041 | 3 | fig|350703.3.peg.5748 | Pseudomonas aeruginosa 2192 | Prophage Clp protease-like protein | LocusTag:Paer2_01002972, ZP_00973858.1, cds.5748, gi|84325826 |
| 1.7e-041 | 3 | fig|350703.9.peg.2498 | Pseudomonas aeruginosa 2192 | Prophage Clp protease-like protein | |
| 1.7e-041 | 3 | fig|557722.3.peg.851 | Pseudomonas aeruginosa LESB58 | Prophage Clp protease-like protein | geneID|7175726, gi|218889559, locus|PLES_08151, protein_id|YP_002438423.1 |
| 7.1e-040 | 3 | fig|398527.4.peg.4966 | Burkholderia phytofirmans PsJN | hypothetical protein | InterPro:IPR006433, geneID|6284371, gi|187923171, locus|Bphyt_1173, protein_id|YP_001894813.1 |
| 2e-114 | 2 | fig|310037.4.peg.2537 | Acaryochloris sp. CCMEE 5410 | TPR repeat protein | |
| 6.8e-075 | 2 | fig|411464.8.peg.696 | Desulfovibrio piger ATCC 29098 | hypothetical protein | |
| 6.1e-060 | 2 | fig|414684.4.peg.53 | Rhodospirillum centenum SW | ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) | geneID|7004846, gi|209963416, locus|RC1_0069, protein_id|YP_002296331.1 |
| 2.3e-046 | 2 | fig|526222.3.peg.2137 | Desulfovibrio salexigens DSM 2638 | Phage head, head-tail preconnector protease C / Phage head, scaffolding domain Nu3 | geneID|8093325, gi|242279601, locus|Desal_2132, protein_id|YP_002991730.1 |
| 3e-46 | 2 | fig|1036673.3.peg.1249 | Paenibacillus mucilaginosus KNP414 | PAS/PAC sensor signal transduction histidine kinase | gi|336296886, locus|KNP414_01425, protein_id|AEI39989.1 |
| 8e-44 | 2 | fig|1036171.3.peg.320 | Paenibacillus polymyxa ATCC 842 | sensory box/GGDEF family protein | |
| 1.7e-041 | 2 | fig|557722.4.peg.854 | Pseudomonas aeruginosa LESB58 | Prophage Clp protease-like protein | geneID|7175726, gi|218889559, locus|PLES_08151, protein_id|YP_002438423.1 |