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The SEED: an Annotation/Analysis Tool Provided by FIG
[ Essentiality Data | FIG Tutorials | Peer-to-peer Updates | Subsystem Update Queue | SEED Control Panel | PATRIC | SEED Wiki] [RAST | GOLD | "Complete" Genomes in SEED | ExPASy | IMG | KEGG | NCBI | TIGR cmr | UniProt ] SEED version cvs.1555556707 (Wed Apr 17 22:05:07 2019) on gum.mcs.anl.gov |
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| Sim. Sc. | Cluster Size | PEG | Genome | Function | Aliases |
|---|---|---|---|---|---|
| 4.6e-238 | 3 | fig|565662.4.peg.2034 | Enterococcus faecium Com12 | ATP-dependent RNA helicase YfmL | GO:0003676, GO:0005524, GO:0008026, gb|EEI61347.1, gb|EEV60110.1, gi|227180375, gi|227550474, gi|257833689, gi|257897124, gnl|md5|80015377f68affd6b8a3a18e, ref|ZP_03980523.1, ref|ZP_05676777.1, tr|C2H884 |
| 4.6e-238 | 3 | fig|702448.3.peg.355 | Enterococcus faecalis PC1.1 | ATP-dependent RNA helicase YfmL | GO:0003676, GO:0005524, GO:0008026, gb|EEI61347.1, gb|EEV60110.1, gi|227180375, gi|227550474, gi|257833689, gi|257897124, gi|293377346, gnl|md5|80015377f68affd6b8a3a18e, locus|CUO_1449, protein_id|ZP_06623550.1, ref|ZP_03980523.1, ref|ZP_05676777.1, tr|C2H884 |
| 9.8e-225 | 3 | fig|535206.4.peg.1060 | Enterococcus faecium E1162 | ATP-dependent RNA helicase YfmL | GO:0003676, GO:0005524, GO:0008026, gb|EAN10719.1, gb|EEV42368.1, gb|EEV44738.1, gb|EEV53194.1, gi|257813610, gi|257817410, gi|257826568, gi|257879382, gi|257881752, gi|257890208, gi|258615792, gi|293560457, gi|68196290, gi|69244699, gnl|md5|5b41a201a716a8c523ce8ba7, img|638350839, locus|EfmE1162_1104, protein_id|ZP_06676949.1, ref|ZP_00602963.1, ref|ZP_05659035.1, ref|ZP_05661405.1, ref|ZP_05669861.1, ref|ZP_05713562.1, tr|Q3Y2J3 |
| 9.8e-225 | 3 | fig|565657.5.peg.890 | Enterococcus faecium 1,231,502 | ATP-dependent RNA helicase YfmL | GO:0003676, GO:0005524, GO:0008026, gb|EAN10719.1, gb|EEV42368.1, gb|EEV44738.1, gb|EEV53194.1, gi|257813610, gi|257817410, gi|257826568, gi|257879382, gi|257881752, gi|257890208, gi|258615792, gi|68196290, gi|69244699, gnl|md5|5b41a201a716a8c523ce8ba7, img|638350839, ref|ZP_00602963.1, ref|ZP_05659035.1, ref|ZP_05661405.1, ref|ZP_05669861.1, ref|ZP_05713562.1, tr|Q3Y2J3 |
| 9.8e-225 | 3 | fig|749520.3.peg.2421 | Enterococcus faecium TX0082 | ATP-dependent RNA helicase YfmL | |
| 9.8e-225 | 3 | fig|749522.3.peg.2831 | Enterococcus faecium TX0133a01 | ATP-dependent RNA helicase YfmL | |
| 9.8e-225 | 3 | fig|749523.3.peg.497 | Enterococcus faecium TX0133a04 | ATP-dependent RNA helicase YfmL | InterPro:IPR001650, InterPro:IPR011545, gi|314937854, locus|HMPREF9525_00520, protein_id|ZP_07845170.1 |
| 9.8e-225 | 3 | fig|749524.3.peg.1366 | Enterococcus faecium TX0133B | ATP-dependent RNA helicase YfmL | gi|314992814, locus|HMPREF9526_01448, protein_id|ZP_07858215.1 |
| 9.8e-225 | 3 | fig|749525.3.peg.458 | Enterococcus faecium TX0133C | ATP-dependent RNA helicase YfmL | |
| 1.6e-118 | 3 | fig|749497.3.peg.2286 | Enterococcus faecalis TX0017 | ATP-dependent RNA helicase YfmL | InterPro:IPR001650, InterPro:IPR011545, gi|315031705, locus|HMPREF9500_02423, protein_id|EFT43637.1 |
| 2.1e-118 | 3 | fig|226185.1.peg.929 | Enterococcus faecalis V583 | ATP-dependent RNA helicase YfmL | EF1009, GO:0003676, GO:0005524, GO:0008026, GeneID:1199897, NP_814744.1, cmr|EF_1009, gb|AAO80814.1, gb|EEU90387.1, gi|257160427, gi|257418599, gi|29343051, gi|29375590, gnl|md5|0668175f220bac2267c58c50, img|637414231, kegg|efa:EF1009, ref|NP_814744.1, ref|ZP_05595593.1, tr|Q836U7 |
| 4.3e-239 | 2 | fig|1167697.3.peg.2142 | Enterococcus faecium LCT-EF90 | ATP-dependent RNA helicase YfmL | |
| 4.3e-239 | 2 | fig|529885.3.peg.1420 | Enterococcus faecium E980 | ATP-dependent RNA helicase YfmL | gi|293571717, gnl|md5|91dc938e01e93e4c9c9bf909, locus|EfmE980_1484, protein_id|ZP_06682736.1 |
| 9.2e-239 | 2 | fig|565659.3.peg.2005 | Enterococcus faecium 1,141,733 | ATP-dependent RNA helicase YfmL | gb|EEV51487.1, gi|257824555, gi|257888501, gnl|md5|87046b637bf8774ee547c785, ref|ZP_05668154.1 |
| 4.6e-238 | 2 | fig|525279.3.peg.2372 | Enterococcus faecium TX1330 | ATP-dependent RNA helicase YfmL | GO:0003676, GO:0005524, GO:0008026, gb|EEI61347.1, gb|EEV60110.1, gi|227180375, gi|227550474, gi|257833689, gi|257897124, gnl|md5|80015377f68affd6b8a3a18e, ref|ZP_03980523.1, ref|ZP_05676777.1, tr|C2H884 |
| 4.6e-238 | 2 | fig|791161.5.peg.364 | Enterococcus faecium PC4.1 | ATP-dependent RNA helicase YfmL | gi|292644038, locus|CUO_1449, protein_id|EFF62144.1 |
| 3.4e-225 | 2 | fig|1178528.3.peg.1782 | Enterococcus faecium LCT-EF128 | ATP-dependent RNA helicase YfmL | |
| 3.4e-225 | 2 | fig|535205.4.peg.983 | Enterococcus faecium E1071 | ATP-dependent RNA helicase YfmL | gb|EEV48180.1, gi|257821046, gi|257885194, gi|293568282, gnl|md5|5b3a7e7f08f6f161bb2e980e, locus|EfmE1071_1067, protein_id|ZP_06679606.1, ref|ZP_05664847.1 |
| 3.4e-225 | 2 | fig|565658.4.peg.1456 | Enterococcus faecium 1,231,501 | ATP-dependent RNA helicase YfmL | gb|EEV48180.1, gi|257821046, gi|257885194, gnl|md5|5b3a7e7f08f6f161bb2e980e, ref|ZP_05664847.1 |
| 3.4e-225 | 2 | fig|645663.4.peg.558 | Enterococcus faecium E1039 | ATP-dependent RNA helicase YfmL | gb|EEV48180.1, gi|257821046, gi|257885194, gi|293553202, gnl|md5|5b3a7e7f08f6f161bb2e980e, locus|EfmE1039_0581, protein_id|ZP_06673839.1, ref|ZP_05664847.1 |
| 3.4e-225 | 2 | fig|933356.3.peg.279 | Enterococcus faecium E4452 | ATP-dependent RNA helicase YfmL | gi|364093794, locus|EfmE4452_1875, protein_id|EHM36030.1 |
| 4.4e-225 | 2 | fig|544875.4.peg.750 | Enterococcus faecium E1636 | ATP-dependent RNA helicase YfmL | gi|294614694, gnl|md5|273c1021373d69ef957a7ea9, locus|EfmE1636_0786, protein_id|ZP_06694596.1 |
| 4.4e-225 | 2 | fig|565665.3.peg.510 | Enterococcus faecium D344SRF | ATP-dependent RNA helicase YfmL | gi|289565444, gnl|md5|273c1021373d69ef957a7ea9, locus|EDAG_00491, protein_id|ZP_06445893.1 |
| 4.4e-225 | 2 | fig|565666.3.peg.43 | Enterococcus faecium TC 6 | ATP-dependent RNA helicase YfmL | gi|261206534, gnl|md5|273c1021373d69ef957a7ea9, locus|EFZG_01946, protein_id|ZP_05921234.1 |
| 9.8e-225 | 2 | fig|1155766.14.peg.810 | Enterococcus faecium Aus0004 | ATP-dependent RNA helicase YfmL | geneID|11954677, gi|383328101, locus|EFAU004_00782, protein_id|YP_005353985.1 |
| 9.8e-225 | 2 | fig|333849.6.peg.510 | Enterococcus faecium DO | ATP-dependent RNA helicase YfmL | GO:0003676, GO:0005524, GO:0008026, InterPro:IPR001410, InterPro:IPR001650, InterPro:IPR011545, gb|EAN10719.1, gb|EEV42368.1, gb|EEV44738.1, gb|EEV53194.1, gi|257813610, gi|257817410, gi|257826568, gi|257879382, gi|257881752, gi|257890208, gi|258615792, gi|68196290, gi|69244699, gnl|md5|5b41a201a716a8c523ce8ba7, img|638350839, locus|EfaeDRAFT_2207, protein_id|ZP_00602963.1, ref|ZP_00602963.1, ref|ZP_05659035.1, ref|ZP_05661405.1, ref|ZP_05669861.1, ref|ZP_05713562.1, tr|Q3Y2J3 |
| 9.8e-225 | 2 | fig|565656.3.peg.1288 | Enterococcus faecium 1,230,933 | ATP-dependent RNA helicase YfmL | GO:0003676, GO:0005524, GO:0008026, gb|EAN10719.1, gb|EEV42368.1, gb|EEV44738.1, gb|EEV53194.1, gi|257813610, gi|257817410, gi|257826568, gi|257879382, gi|257881752, gi|257890208, gi|258615792, gi|68196290, gi|69244699, gnl|md5|5b41a201a716a8c523ce8ba7, img|638350839, ref|ZP_00602963.1, ref|ZP_05659035.1, ref|ZP_05661405.1, ref|ZP_05669861.1, ref|ZP_05713562.1, tr|Q3Y2J3 |
| 9.8e-225 | 2 | fig|565660.4.peg.768 | Enterococcus faecium 1,231,410 | ATP-dependent RNA helicase YfmL | GO:0003676, GO:0005524, GO:0008026, gb|EAN10719.1, gb|EEV42368.1, gb|EEV44738.1, gb|EEV53194.1, gi|257813610, gi|257817410, gi|257826568, gi|257879382, gi|257881752, gi|257890208, gi|258615792, gi|68196290, gi|69244699, gnl|md5|5b41a201a716a8c523ce8ba7, img|638350839, ref|ZP_00602963.1, ref|ZP_05659035.1, ref|ZP_05661405.1, ref|ZP_05669861.1, ref|ZP_05713562.1, tr|Q3Y2J3 |
| 9.8e-225 | 2 | fig|565664.3.peg.623 | Enterococcus faecium C68 | ATP-dependent RNA helicase YfmL | GO:0003676, GO:0005524, GO:0008026, gb|EAN10719.1, gb|EEV42368.1, gb|EEV44738.1, gb|EEV53194.1, gi|257813610, gi|257817410, gi|257826568, gi|257879382, gi|257881752, gi|257890208, gi|258615792, gi|68196290, gi|69244699, gnl|md5|5b41a201a716a8c523ce8ba7, img|638350839, ref|ZP_00602963.1, ref|ZP_05659035.1, ref|ZP_05661405.1, ref|ZP_05669861.1, ref|ZP_05713562.1, tr|Q3Y2J3 |
| 9.8e-225 | 2 | fig|749521.3.peg.712 | Enterococcus faecium TX0133A | ATP-dependent RNA helicase YfmL | InterPro:IPR001650, InterPro:IPR011545, gi|314951355, locus|HMPREF9523_00754, protein_id|ZP_07854409.1 |
| 9.8e-225 | 2 | fig|873127.3.peg.2251 | Enterococcus faecium E4453 | ATP-dependent RNA helicase YfmL | gi|364090053, locus|EfmE4453_2110, protein_id|EHM32684.1 |
| 9.4e-143 | 2 | fig|546340.3.peg.1636 | Enterococcus faecium E1679 | ATP-dependent RNA helicase YfmL | gi|294619009, gnl|md5|111a181a3bfa309ffe00dfb8, locus|EfmE1679_1845, protein_id|ZP_06698504.1 |
| 9.4e-143 | 2 | fig|547468.4.peg.951 | Enterococcus faecium U0317 | ATP-dependent RNA helicase YfmL | gi|294621621, gnl|md5|111a181a3bfa309ffe00dfb8, locus|EfmU0317_1062, protein_id|ZP_06700786.1 |
| 9.4e-143 | 2 | fig|565661.4.peg.1481 | Enterococcus faecium 1,231,408 | ATP-dependent RNA helicase YfmL | gnl|md5|111a181a3bfa309ffe00dfb8 |
| 2e-120 | 2 | fig|749516.3.peg.1630 | Enterococcus faecalis TX1346 | ATP-dependent RNA helicase YfmL | InterPro:IPR001650, InterPro:IPR011545, gi|315173277, locus|HMPREF9519_01716, protein_id|EFU17294.1 |
| 3e-120 | 2 | fig|749496.3.peg.2212 | Enterococcus faecalis TX0012 | ATP-dependent RNA helicase YfmL | InterPro:IPR001650, InterPro:IPR011545, gi|315149531, locus|HMPREF9499_02328, protein_id|EFT93547.1 |
| 1.6e-118 | 2 | fig|565643.5.peg.643 | Enterococcus faecalis DS5 | ATP-dependent RNA helicase YfmL | gb|EEU64230.1, gb|EEU73230.1, gi|256947598, gi|256957102, gi|256985928, gi|257077898, gnl|md5|592169ea0773b0f3af6421c6, ref|ZP_05561273.1, ref|ZP_05572259.1 |
| 1.6e-118 | 2 | fig|565648.4.peg.347 | Enterococcus faecalis JH1 | ATP-dependent RNA helicase YfmL | gb|EEU64230.1, gb|EEU73230.1, gi|256947598, gi|256957102, gi|256985928, gi|257077898, gnl|md5|592169ea0773b0f3af6421c6, ref|ZP_05561273.1, ref|ZP_05572259.1 |
| 1.6e-118 | 2 | fig|702445.3.peg.218 | Bacteroides vulgatus EK4.2 | ATP-dependent RNA helicase YfmL | gb|EEU64230.1, gb|EEU73230.1, gi|256947598, gi|256957102, gi|256985928, gi|257077898, gi|294779263, gnl|md5|592169ea0773b0f3af6421c6, locus|CUI_1235, protein_id|ZP_06744667.1, ref|ZP_05561273.1, ref|ZP_05572259.1 |
| 1.6e-118 | 2 | fig|749494.3.peg.1068 | Enterococcus faecalis TX4244 | ATP-dependent RNA helicase YfmL | InterPro:IPR001650, InterPro:IPR011545, gi|315147960, locus|HMPREF9497_01118, protein_id|EFT91976.1 |
| 1.6e-118 | 2 | fig|749495.4.peg.227 | Enterococcus faecalis TX4248 | ATP-dependent RNA helicase YfmL | InterPro:IPR001650, InterPro:IPR011545, gi|307268089, locus|HMPREF9498_00233, protein_id|ZP_07549477.1 |
| 1.6e-118 | 2 | fig|749498.3.peg.2903 | Enterococcus faecalis TX0027 | ATP-dependent RNA helicase YfmL | gi|315034238, locus|HMPREF9501_03070, protein_id|EFT46170.1 |
| 1.6e-118 | 2 | fig|749517.3.peg.1784 | Enterococcus faecalis TX1467 | ATP-dependent RNA helicase YfmL | InterPro:IPR001650, InterPro:IPR011545, gi|329574334, locus|HMPREF9520_01956, protein_id|EGG55906.1 |
| 1.6e-118 | 2 | fig|936153.3.peg.1404 | Enterococcus faecalis 62 | ATP-dependent RNA helicase YfmL | PFAM:PF00270.22, gi|323480248, locus|EF62_1443, protein_id|ADX79687.1 |
| 1.6e-118 | 2 | fig|474186.5.peg.723 | Enterococcus faecalis OG1RF | ATP-dependent RNA helicase YfmL | gnl|md5|111dcdd0a19d1b8c73d0e2dd |
| 2.1e-118 | 2 | fig|226185.9.peg.943 | Enterococcus faecalis V583 | ATP-dependent RNA helicase YfmL | GO:0003676, GO:0005524, GO:0008026, cmr|EF_1009, gb|AAO80814.1, gb|EEU90387.1, geneID|1199897, gi|257160427, gi|257418599, gi|29343051, gi|29375590, gnl|md5|0668175f220bac2267c58c50, img|637414231, kegg|efa:EF1009, locus|EF1009, protein_id|NP_814744.1, ref|NP_814744.1, ref|ZP_05595593.1, tr|Q836U7 |
| 2.1e-118 | 2 | fig|565640.5.peg.836 | Enterococcus faecalis T11 | ATP-dependent RNA helicase YfmL | GO:0003676, GO:0005524, GO:0008026, cmr|EF_1009, gb|AAO80814.1, gb|EEU90387.1, gi|257160427, gi|257418599, gi|29343051, gi|29375590, gnl|md5|0668175f220bac2267c58c50, img|637414231, kegg|efa:EF1009, ref|NP_814744.1, ref|ZP_05595593.1, tr|Q836U7 |
| 2.1e-118 | 2 | fig|749503.3.peg.1340 | Enterococcus faecalis TX0309A | ATP-dependent RNA helicase YfmL | InterPro:IPR001650, InterPro:IPR011545, gi|315581598, locus|HMPREF9506_01432, protein_id|EFU93789.1 |