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The SEED: an Annotation/Analysis Tool Provided by FIG
[ Essentiality Data | FIG Tutorials | Peer-to-peer Updates | Subsystem Update Queue | SEED Control Panel | PATRIC | SEED Wiki] [RAST | GOLD | "Complete" Genomes in SEED | ExPASy | IMG | KEGG | NCBI | TIGR cmr | UniProt ] SEED version cvs.1555556707 (Wed Apr 17 22:05:07 2019) on aspen.cels.anl.gov |
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| Sim. Sc. | Cluster Size | PEG | Genome | Function | Aliases |
|---|---|---|---|---|---|
| 2.5e-020 | 4 | fig|573061.3.peg.2299 | Clostridium cellulovorans 743B | regulatory protein, MarR | InterPro:IPR000835, gi|242260992, locus|ClocelDRAFT_2273, protein_id|ZP_04805704.1 |
| 1.0e-021 | 3 | fig|410358.8.peg.1269 | Methanocorpusculum labreanum Z | Transcriptional regulator, MarR family | GeneID:4795231, Mlab_1259, YP_001030695.1, gi|124486079 |
| 4.9e-021 | 3 | fig|536233.3.peg.2624 | Clostridium botulinum E1 str. 'BoNT E Beluga' | regulatory protein, MarR | gi|251779882, locus|CLO_2694, protein_id|ZP_04822802.1 |
| 1.4e-020 | 3 | fig|610130.3.peg.1247 | Clostridium saccharolyticum WM1 | Transcriptional regulator, MarR family | InterPro:IPR000835, geneID|9506428, gi|302385559, locus|Closa_1145, protein_id|YP_003821381.1 |
| 2.5e-020 | 3 | fig|573061.4.peg.789 | Clostridium cellulovorans 743B | regulatory protein, MarR | CDD:128641, gi|307687306, locus|Ccel74_010100004061, protein_id|ZP_07629752.1 |
| 2.5e-020 | 3 | fig|573061.5.peg.3954 | Clostridium cellulovorans 743B | regulatory protein, MarR | GO:0003700, InterPro:IPR000835, geneID|9610744, gi|302876632, locus|Clocel_3831, protein_id|YP_003845265.1 |
| 1.3e-018 | 3 | fig|290402.34.peg.3238 | Clostridium beijerincki beijerinckii NCIMB 8052 | Transcriptional regulator, MarR family | ABR35428.1, Cbei_3301, InterPro:IPR000835, gi|149904595 |
| 1.3e-018 | 3 | fig|290402.41.peg.3429 | Clostridium beijerinckii NCIMB 8052 | Transcriptional regulator, MarR family | InterPro:IPR000835, geneID|5294474, gi|150018130, locus|Cbei_3301, protein_id|YP_001310384.1 |
| 2.9e-018 | 3 | fig|1538.8.peg.1491 | Clostridium ljungdahlii | Transcriptional regulator, MarR family | geneID|9445133, gi|300854698, locus|CLJU_c15160, protein_id|YP_003779682.1 |
| 3.9e-018 | 3 | fig|272562.8.peg.3594 | Clostridium acetobutylicum ATCC 824 | Transcriptional regulator, MarR family | geneID|1119595, gi|15896654, locus|CA_C3413, protein_id|NP_350003.1 |
| 3.9e-018 | 3 | fig|863638.3.peg.3447 | Clostridium acetobutylicum EA 2018 | Transcriptional regulator, MarR family | gi|325510817, locus|CEA_G3416, protein_id|ADZ22453.1 |
| 3.9e-018 | 3 | fig|991791.3.peg.3440 | Clostridium acetobutylicum DSM 1731 | Transcriptional regulator, MarR family | gi|336291697, locus|SMB_G3450, protein_id|AEI32831.1 |
| 4.6e-018 | 3 | fig|536227.4.peg.1517 | Clostridium carboxidivorans P7 | Transcriptional regulator, MarR family | |
| 5.1e-018 | 3 | fig|445971.6.peg.1469 | Anaerofustis stercorihominis DSM 17244 | Transcriptional regulator, MarR family | InterPro:IPR000835, InterPro:IPR011991, gi|169335153, locus|ANASTE_01560, protein_id|ZP_02862346.1 |
| 3.3e-017 | 3 | fig|411470.6.peg.2621 | Ruminococcus gnavus ATCC 29149 | Transcriptional regulator, MarR family | InterPro:IPR000835, InterPro:IPR011991, gi|154505485, locus|RUMGNA_03022, protein_id|ZP_02042223.1 |
| 7e-17 | 3 | fig|658082.3.peg.637 | Lachnospiraceae bacterium 2_1_58FAA | hypothetical protein | gi|336019938, locus|HMPREF0991_00629, protein_id|EGN49656.1 |
| 4.3e-017 | 3 | fig|476272.5.peg.1898 | Blautia hydrogenotrophica DSM 10507 | Transcriptional regulator, MarR family | |
| 1.2e-016 | 3 | fig|245014.3.peg.796 | butyrate-producing bacterium SS3/4 | Transcriptional regulator, MarR family | |
| 1.6e-016 | 3 | fig|457396.3.peg.1155 | Clostridium sp. 7_2_43FAA | hypothetical protein | |
| 2.2e-016 | 3 | fig|411902.9.peg.5079 | Clostridium bolteae ATCC BAA-613 | Transcriptional regulator, MarR family | InterPro:IPR000835, InterPro:IPR011991, gi|160941183, locus|CLOBOL_06076, protein_id|ZP_02088520.1 |
| 2.2e-016 | 3 | fig|411486.3.peg.3344 | Clostridium sp. M62/1 | hypothetical protein | |
| 7.2e-016 | 3 | fig|717608.3.peg.75 | Clostridium cf. saccharolyticum K10 | Transcriptional regulator, MarR family | |
| 3.7e-016 | 3 | fig|500632.7.peg.919 | Clostridium nexile DSM 1787 | Transcriptional regulator, MarR family | |
| 3.8e-016 | 3 | fig|272564.6.peg.2339 | Desulfitobacterium hafniense DCB-2 | transcriptional regulator, MarR family | InterPro:IPR000835, geneID|7259213, gi|219668276, locus|Dhaf_2244, protein_id|YP_002458711.1 |
| 8e-16 | 3 | fig|208596.3.peg.819 | Carnobacterium sp. 17-4 | transcriptional regulatory protein | geneID|10440934, gi|328957138, locus|CAR_c08140, protein_id|YP_004374524.1 |
| 7.8e-016 | 3 | fig|588581.3.peg.3150 | Clostridium papyrosolvens DSM 2782 | Transcriptional regulator, MarR family | InterPro:IPR000835, gi|256756181, locus|CpapDRAFT_3114, protein_id|ZP_05496944.1 |
| 5.2e-015 | 3 | fig|469596.3.peg.3437 | Coprobacillus sp. 29_1 | Transcriptional regulator, MarR family | |
| 5.2e-015 | 3 | fig|556262.3.peg.718 | Coprobacillus sp. D6 | Transcriptional regulator, MarR family | |
| 6.8e-015 | 3 | fig|573413.5.peg.3345 | Spirochaeta smaragdinae DSM 11293 | Transcriptional regulator, MarR family | geneID|9491393, gi|302339756, locus|Spirs_3270, protein_id|YP_003804962.1 |
| 8.9e-015 | 3 | fig|556261.3.peg.629 | Clostridium sp. D5 | transcriptional regulator, MarR family | |
| 5.7e-017 | 2 | fig|470146.3.peg.72 | Coprococcus comes ATCC 27758 | Transcriptional regulator, MarR family | |
| 1.8e-015 | 2 | fig|742740.3.peg.2254 | Clostridium symbiosum WAL-14163 | Transcriptional regulator, MarR family | |
| 1.8e-015 | 2 | fig|742741.3.peg.3188 | Clostridium symbiosum WAL-14673 | Transcriptional regulator, MarR family |