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The SEED: an Annotation/Analysis Tool Provided by FIG
[ Essentiality Data | FIG Tutorials | Peer-to-peer Updates | Subsystem Update Queue | SEED Control Panel | PATRIC | SEED Wiki] [RAST | GOLD | "Complete" Genomes in SEED | ExPASy | IMG | KEGG | NCBI | TIGR cmr | UniProt ] SEED version cvs.1555556707 (Wed Apr 17 22:05:07 2019) on gum.mcs.anl.gov |
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| Sim. Sc. | Cluster Size | PEG | Genome | Function | Aliases |
|---|---|---|---|---|---|
| 5.4e-216 | 6 | fig|657313.3.peg.840 | Ruminococcus torques L2-14 | TrsK-like protein | |
| 3.3e-180 | 5 | fig|610130.3.peg.4017 | Clostridium saccharolyticum WM1 | TrsK-like protein | InterPro:IPR003688, geneID|9509038, gi|302388041, locus|Closa_3720, protein_id|YP_003823863.1 |
| 0.000000 | 4 | fig|717960.3.peg.516 | Eubacterium cylindroides T2-87 | TrsK-like protein | |
| 1.3e-251 | 4 | fig|411463.4.peg.1084 | Eubacterium ventriosum ATCC 27560 | TrsK-like protein | GO:0009291, GO:0016020, gb|EDM52012.1, gi|149736126, gi|154483041, gnl|md5|cdc9eb33838f9ad116c96a5a, img|640998100, ref|ZP_02025489.1, tr|A5Z4W2 |
| 0.0 | 4 | fig|742723.3.peg.1436 | Lachnospiraceae bacterium 2_1_46FAA | TrsK-like protein | gi|331091953, locus|HMPREF9477_01428, protein_id|ZP_08340785.1 |
| 0.0 | 4 | fig|886289.3.peg.1003 | Streptococcus pneumoniae GA17545 | TrsK-like protein | gi|332075646, locus|SPAR148_0988, protein_id|EGI86114.1 |
| 1.2e-217 | 4 | fig|411485.10.peg.2646 | Faecalibacterium prausnitzii M21/2 | TrsK-like protein | GO:0009291, GO:0016020, InterPro:IPR003688, gb|EDP20614.1, gi|158443609, gi|160945878, gnl|md5|06c9888929984782b25cdf9e, img|641410899, locus|FAEPRAM212_03411, protein_id|ZP_02093104.1, ref|ZP_02093104.1, tr|A8SHM5 |
| 5.4e-216 | 4 | fig|657323.3.peg.3722 | Ruminococcus sp. SR1/5 | TrsK-like protein | |
| 4.4e-215 | 4 | fig|470146.3.peg.1379 | Coprococcus comes ATCC 27758 | TrsK-like protein | GO:0009291, GO:0016020, gb|EEG91150.1, gi|225208796, gi|226322815, gnl|md5|0637169970929731f47930ac, ref|ZP_03798333.1, tr|C0B616 |
| 5.8e-215 | 4 | fig|411469.3.peg.366 | Eubacterium hallii DSM 3353 | TrsK-like protein | GO:0009291, GO:0016020, InterPro:IPR003688, gb|EEG37638.1, gi|224956429, gi|225026178, gnl|md5|717300681f39734f1bf48d46, locus|EUBHAL_00419, protein_id|ZP_03715370.1, ref|ZP_03715370.1, tr|C0ESP6 |
| 6.8e-185 | 4 | fig|718252.3.peg.2267 | Faecalibacterium prausnitzii L2-6 | TrsK-like protein | |
| 7.7e-185 | 4 | fig|552398.3.peg.2767 | Ruminococcaceae bacterium D16 | TrsK-like protein | CDD:111435, gi|307694092, locus|RbacD_010100013916, protein_id|ZP_07636329.1 |
| 1.0e-184 | 4 | fig|633697.3.peg.1894 | Eubacterium cellulosolvens 6 | TrsK-like protein | InterPro:IPR003688, gi|313905776, locus|EubceDRAFT_1850, protein_id|ZP_07839135.1 |
| 0.000000 | 3 | fig|457421.5.peg.4014 | Clostridiales bacterium 1_7_47FAA | TrsK-like protein | gb|EEQ60511.1, gi|239520645, gi|239624259, gnl|md5|3458b93b9a9abeb3db01461f, ref|ZP_04667290.1, tr|C5ER67 |
| 0.000000 | 3 | fig|658659.3.peg.2050 | Erysipelotrichaceae bacterium 3_1_53 | TrsK-like protein | |
| 0.000000 | 3 | fig|622312.4.peg.2174 | Roseburia inulinivorans DSM 16841 | TrsK-like protein | GO:0009291, GO:0016020, InterPro:IPR003688, gb|EEG93765.1, gi|225211411, gi|225376785, gnl|md5|7eb409f40ed94c8a6e4fdd30, locus|ROSEINA2194_02427, protein_id|ZP_03754006.1, ref|ZP_03754006.1, tr|C0FUK6 |
| 2.7e-252 | 3 | fig|657314.3.peg.2827 | Ruminococcus obeum A2-162 | TrsK-like protein | |
| 3.2e-228 | 3 | fig|411459.7.peg.84 | Ruminococcus obeum ATCC 29174 | TrsK-like protein | gnl|md5|6a98a779c6470edb4f5bf62f |
| 0.0 | 3 | fig|575593.3.peg.2100 | Lachnospiraceae oral taxon 107 str. F0167 | TrsK-like protein | gi|331003739, locus|HMPREF0491_02095, protein_id|ZP_08327233.1 |
| 0.0 | 3 | fig|1000568.3.peg.1497 | Megasphaera sp. UPII 199-6 | TrsK-like protein | gi|335050221, locus|HMPREF1039_0576, protein_id|ZP_08543195.1 |
| 0.0 | 3 | fig|879305.3.peg.1481 | Anaerococcus prevotii ACS-065-V-Col13 | TraG/TraD family protein | gi|325478373, locus|HMPREF9290_0495, protein_id|EGC81488.1 |
| 0.0 | 3 | fig|875093.3.peg.1212 | Streptococcus pseudoporcinus LQ 940-04 | TrsK-like protein | |
| 1.8e-216 | 3 | fig|478749.5.peg.1328 | Bryantella formatexigens DSM 14469 | TrsK-like protein | InterPro:IPR003688, gb|EET61319.1, gi|255268114, gi|255505371, gnl|md5|ef9e74869e904b4ba29a5bc1, locus|BRYFOR_06494, protein_id|ZP_05345712.3, ref|ZP_05345712.3 |
| 1.3e-195 | 3 | fig|518636.5.peg.3789 | Clostridium asparagiforme DSM 15981 | TrsK-like protein | GO:0009291, GO:0016020, gb|EEG52755.1, gi|225042509, gi|225407969, gnl|md5|0920f6d698f17c397405a777, ref|ZP_03761158.1, tr|C0D7E3 |
| 1.5e-195 | 3 | fig|657319.3.peg.1737 | Eubacterium siraeum 70/3 | TrsK-like protein | |
| 5.1e-186 | 3 | fig|663278.3.peg.1781 | Ethanoligenens harbinense YUAN-3 | TrsK-like protein | InterPro:IPR003688, gi|289639345, gnl|md5|5b25de399eebece2803f4fa8, locus|EthhaDRAFT_1661, protein_id|ZP_06471583.1 |
| 5.1e-186 | 3 | fig|663278.4.peg.2062 | Ethanoligenens harbinense YUAN-3 | TrsK-like protein | InterPro:IPR003688, geneID|10092871, gi|317132831, locus|Ethha_1892, protein_id|YP_004092145.1 |
| 2.4e-182 | 3 | fig|511680.4.peg.654 | Butyrivibrio crossotus DSM 2876 | TrsK-like protein | gnl|md5|436d389757de992909794842 |
| 6.5e-182 | 3 | fig|592010.4.peg.2357 | Abiotrophia defectiva ATCC 49176 | TrsK-like protein | gb|EEP24862.1, gi|229788748, gi|229827130, gnl|md5|8ecf542b6ab22ac838060bb4, ref|ZP_04453199.1, tr|C4G548 |
| 1.6e-177 | 3 | fig|556261.3.peg.2196 | Clostridium sp. D5 | TrsK-like protein | |
| 0.000000 | 2 | fig|545696.4.peg.1977 | |||
| 0.000000 | 2 | fig|411470.6.peg.663 | Ruminococcus gnavus ATCC 29149 | TrsK-like protein | GO:0009291, GO:0016020, InterPro:IPR003688, gb|EDN78918.1, gi|153796498, gi|154502959, gnl|md5|3a1f8e5b207d43b7ab0259f7, img|641052130, locus|RUMGNA_00780, protein_id|ZP_02040019.1, ref|ZP_02040019.1, tr|A7AZQ7 |
| 1.5e-191 | 2 | fig|717608.3.peg.1832 | Clostridium cf. saccharolyticum K10 | hypothetical protein | |
| 6.8e-185 | 2 | fig|565656.3.peg.1307 | Enterococcus faecium 1,230,933 | TrsK-like protein | gnl|md5|6bc1a9b990ec5aff64cf964f |